RNA–Protein interactions for RNA: ENST00000374481.7

CD28-202, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 4,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-202ENST00000374481 PTPRSQ13332 1948 aa7.63□□□□□ -1.19
CD28-202ENST00000374481 ZFHX2Q9C0A1 2572 aaPredicted RBP7.63□□□□□ -1.19
CD28-202ENST00000374481 GNLYP22749 145 aa7.62□□□□□ -1.19
CD28-202ENST00000374481 H3BUX3 64 aa7.62□□□□□ -1.19
CD28-202ENST00000374481 RNASE3P12724 160 aaKnown RBP7.62□□□□□ -1.19
CD28-202ENST00000374481 A0A0C4DFX4 3053 aa7.62□□□□□ -1.19
CD28-202ENST00000374481 TSHBP01222 138 aa7.62□□□□□ -1.19
CD28-202ENST00000374481 HILS1P60008 231 aa7.62□□□□□ -1.19
CD28-202ENST00000374481 PRR9Q5T870 116 aa7.62□□□□□ -1.19
CD28-202ENST00000374481 BRD3OSQ6XYD6 125 aa7.62□□□□□ -1.19
CD28-202ENST00000374481 LINC00336Q6ZUF6 198 aa7.62□□□□□ -1.19
CD28-202ENST00000374481 FAM19A1Q7Z5A9 133 aa7.62□□□□□ -1.19
CD28-202ENST00000374481 PSMG3-AS1Q96PY0 264 aa7.62□□□□□ -1.19
CD28-202ENST00000374481 ADAMTS20P59510 1910 aa7.61□□□□□ -1.19
CD28-202ENST00000374481 CCKP06307 115 aa7.61□□□□□ -1.19
CD28-202ENST00000374481 RMI2Q96E14 147 aa7.61□□□□□ -1.19
CD28-202ENST00000374481 WISP2O76076 250 aa7.61□□□□□ -1.19
CD28-202ENST00000374481 SMIM11BQ8TCY0 68 aa7.6□□□□□ -1.19
CD28-202ENST00000374481 LINC00467Q9BRT7 94 aa7.6□□□□□ -1.19
CD28-202ENST00000374481 COL5A1P20908 1838 aaPredicted RBP7.6□□□□□ -1.19
CD28-202ENST00000374481 GPHB5Q86YW7 130 aa7.6□□□□□ -1.19
CD28-202ENST00000374481 MP68P56378 58 aa7.6□□□□□ -1.19
CD28-202ENST00000374481 LRCOL1A6NCL2 159 aa7.59□□□□□ -1.19
CD28-202ENST00000374481 CFHR3Q02985 330 aa7.59□□□□□ -1.19
CD28-202ENST00000374481 FAM19A3Q7Z5A8 133 aa7.59□□□□□ -1.19
CD28-202ENST00000374481 Q8N9W7 124 aa7.59□□□□□ -1.19
CD28-202ENST00000374481 DKK4Q9UBT3 224 aa7.59□□□□□ -1.19
CD28-202ENST00000374481 HTTP42858 3142 aa7.59□□□□□ -1.19
CD28-202ENST00000374481 DCANP1Q8TF63 244 aa7.59□□□□□ -1.19
CD28-202ENST00000374481 PTPRBP23467 1997 aa7.59□□□□□ -1.19
CD28-202ENST00000374481 PTPRQQ9UMZ3 2332 aa7.59□□□□□ -1.19
CD28-202ENST00000374481 IGHV4-28A0A0C4DH34 117 aa7.59□□□□□ -1.19
CD28-202ENST00000374481 H3BQ85 93 aa7.59□□□□□ -1.2
CD28-202ENST00000374481 SIRPDQ9H106 197 aa7.58□□□□□ -1.2
CD28-202ENST00000374481 ZFAND3Q9H8U3 227 aa7.58□□□□□ -1.2
CD28-202ENST00000374481 UNQ9165/PRO28630Q6UXU0 137 aa7.58□□□□□ -1.2
CD28-202ENST00000374481 DMDP11532 3685 aa7.57□□□□□ -1.2
CD28-202ENST00000374481 BPY2O14599 106 aa7.57□□□□□ -1.2
CD28-202ENST00000374481 EDN2P20800 178 aa7.57□□□□□ -1.2
CD28-202ENST00000374481 RPL28P46779 137 aaKnown RBP7.57□□□□□ -1.2
CD28-202ENST00000374481 HIGD2BQ4VC39 106 aa7.57□□□□□ -1.2
CD28-202ENST00000374481 CCDC140Q96MF4 163 aa7.57□□□□□ -1.2
CD28-202ENST00000374481 SPTBN5Q9NRC6 3674 aaKnown RBP7.57□□□□□ -1.2
CD28-202ENST00000374481 ANKHD1Q8IWZ3 2542 aaKnown RBP7.57□□□□□ -1.2
CD28-202ENST00000374481 REV3LO60673 3130 aa7.57□□□□□ -1.2
CD28-202ENST00000374481 LYRM9A8MSI8 78 aa7.57□□□□□ -1.2
CD28-202ENST00000374481 TNFRSF13BO14836 293 aaPredicted RBP7.57□□□□□ -1.2
CD28-202ENST00000374481 DEFB121Q5J5C9 76 aa7.57□□□□□ -1.2
CD28-202ENST00000374481 CLPSL2Q6UWE3 100 aa7.57□□□□□ -1.2
CD28-202ENST00000374481 SMCR5Q8TEV8 140 aa7.57□□□□□ -1.2
CD28-202ENST00000374481 FHL2Q14192 279 aa7.56□□□□□ -1.2
CD28-202ENST00000374481 C11orf44Q8N8P7 122 aa7.56□□□□□ -1.2
CD28-202ENST00000374481 TRBV10-1A0A0K0K1A3 114 aa7.56□□□□□ -1.2
CD28-202ENST00000374481 FAM215AQ9Y5M1 114 aa7.56□□□□□ -1.2
CD28-202ENST00000374481 A0A087WYN8 130 aa7.55□□□□□ -1.2
CD28-202ENST00000374481 CHKB-CPT1BH3BT56 60 aa7.55□□□□□ -1.2
CD28-202ENST00000374481 ESRGQ1W209 222 aa7.55□□□□□ -1.2
CD28-202ENST00000374481 PSPHP1O15172 72 aa7.55□□□□□ -1.2
CD28-202ENST00000374481 PRR4Q16378 134 aa7.55□□□□□ -1.2
CD28-202ENST00000374481 Q8N3U1 123 aa7.55□□□□□ -1.2
CD28-202ENST00000374481 UBE2D4Q9Y2X8 147 aa7.54□□□□□ -1.2
CD28-202ENST00000374481 NOTCH2Q04721 2471 aa7.54□□□□□ -1.2
CD28-202ENST00000374481 IBA57-AS1B1ANH7 110 aa7.54□□□□□ -1.2
CD28-202ENST00000374481 DEFB130BP0DP73 79 aa7.54□□□□□ -1.2
CD28-202ENST00000374481 DEFB130AP0DP74 79 aa7.54□□□□□ -1.2
CD28-202ENST00000374481 SPG11Q96JI7 2443 aa7.54□□□□□ -1.2
CD28-202ENST00000374481 HTN3P15516 51 aa7.54□□□□□ -1.2
CD28-202ENST00000374481 LRP4O75096 1905 aa7.53□□□□□ -1.2
CD28-202ENST00000374481 RANBP2P49792 3224 aaKnown RBP7.53□□□□□ -1.2
CD28-202ENST00000374481 CLPSL1A2RUU4 121 aa7.53□□□□□ -1.2
CD28-202ENST00000374481 DEFB105AQ8NG35 78 aa7.53□□□□□ -1.2
CD28-202ENST00000374481 A6NED7 52 aa7.53□□□□□ -1.2
CD28-202ENST00000374481 K7EQD1 137 aa7.53□□□□□ -1.2
CD28-202ENST00000374481 C6orf99Q4VX62 202 aa7.53□□□□□ -1.2
CD28-202ENST00000374481 PROK1P58294 105 aa7.53□□□□□ -1.2
CD28-202ENST00000374481 OXLD1Q5BKU9 147 aa7.53□□□□□ -1.2
CD28-202ENST00000374481 TMEM254Q8TBM7 123 aa7.53□□□□□ -1.2
CD28-202ENST00000374481 PRYO14603 147 aa7.52□□□□□ -1.21
CD28-202ENST00000374481 H3BUA1 57 aa7.52□□□□□ -1.21
CD28-202ENST00000374481 UBE2BP63146 152 aa7.52□□□□□ -1.21
CD28-202ENST00000374481 C22orf34Q6ZV56 151 aa7.52□□□□□ -1.21
CD28-202ENST00000374481 ZNF561-AS1K7EIQ3 104 aa7.51□□□□□ -1.21
CD28-202ENST00000374481 PRUNE2Q8WUY3 3088 aa7.51□□□□□ -1.21
CD28-202ENST00000374481 DSCAMO60469 2012 aa7.51□□□□□ -1.21
CD28-202ENST00000374481 CEP192Q8TEP8 1941 aa7.51□□□□□ -1.21
CD28-202ENST00000374481 TRBV10-3A0A0K0K1G6 114 aa7.51□□□□□ -1.21
CD28-202ENST00000374481 CCL18P55774 89 aa7.51□□□□□ -1.21
CD28-202ENST00000374481 NTM-AS1Q6ZSK4 140 aa7.51□□□□□ -1.21
CD28-202ENST00000374481 Q8N2B8 174 aa7.51□□□□□ -1.21
CD28-202ENST00000374481 DIRC1Q969H9 104 aa7.51□□□□□ -1.21
CD28-202ENST00000374481 AMELXQ99217 191 aa7.5□□□□□ -1.21
CD28-202ENST00000374481 CSPG4Q6UVK1 2322 aa7.5□□□□□ -1.21
CD28-202ENST00000374481 BPESC1Q9GZL8 116 aa7.5□□□□□ -1.21
CD28-202ENST00000374481 C10orf142B7Z368 130 aa7.5□□□□□ -1.21
CD28-202ENST00000374481 ANGP03950 147 aaKnown RBP7.5□□□□□ -1.21
CD28-202ENST00000374481 LINC01561Q8N1V8 128 aa7.5□□□□□ -1.21
CD28-202ENST00000374481 NOP10Q9NPE3 64 aaKnown RBP7.5□□□□□ -1.21
CD28-202ENST00000374481 A0A1W2PRX2 142 aa7.49□□□□□ -1.21
CD28-202ENST00000374481 NCOR2Q9Y618 2525 aa7.49□□□□□ -1.21
CD28-202ENST00000374481 KLLNB2CW77 178 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms