RNA–Protein interactions for RNA: ENST00000372972.6

CSTF2-201, Transcript of cleavage stimulation factor subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF2, Length 1,958 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2-201ENST00000372972 UBE2D2P62837 147 aa9.54□□□□□ -0.88
CSTF2-201ENST00000372972 GAGE12JA6NER3 117 aa9.54□□□□□ -0.88
CSTF2-201ENST00000372972 GAGE4Q13068 117 aa9.54□□□□□ -0.88
CSTF2-201ENST00000372972 GAGE5Q13069 117 aa9.54□□□□□ -0.88
CSTF2-201ENST00000372972 KRTAP24-1Q3LI83 254 aa9.54□□□□□ -0.88
CSTF2-201ENST00000372972 GAGE13Q4V321 117 aa9.54□□□□□ -0.88
CSTF2-201ENST00000372972 DGAT2L7PQ6IED9 249 aa9.54□□□□□ -0.88
CSTF2-201ENST00000372972 Q6ZUT4 128 aa9.54□□□□□ -0.88
CSTF2-201ENST00000372972 TMEM238LA0A1B0GVL6 79 aa9.53□□□□□ -0.88
CSTF2-201ENST00000372972 A0A1B0GWB2 263 aa9.53□□□□□ -0.88
CSTF2-201ENST00000372972 TRBV6-4A0A1B0GX49 114 aa9.53□□□□□ -0.88
CSTF2-201ENST00000372972 A6NJY4 79 aa9.53□□□□□ -0.88
CSTF2-201ENST00000372972 FABP2P12104 132 aa9.53□□□□□ -0.88
CSTF2-201ENST00000372972 OR5A1Q8NGJ0 315 aa9.53□□□□□ -0.88
CSTF2-201ENST00000372972 SPANXB1Q9NS25 103 aaPredicted RBP9.53□□□□□ -0.88
CSTF2-201ENST00000372972 IGHV3-64A0A075B6Q5 118 aa9.52□□□□□ -0.89
CSTF2-201ENST00000372972 K7EP34 96 aa9.52□□□□□ -0.89
CSTF2-201ENST00000372972 NTM-AS1Q6ZSK4 140 aa9.52□□□□□ -0.89
CSTF2-201ENST00000372972 VWFP04275 2813 aa9.52□□□□□ -0.89
CSTF2-201ENST00000372972 TRGV4A0A0C4DH28 118 aa9.52□□□□□ -0.89
CSTF2-201ENST00000372972 IGLL5B9A064 214 aa9.51□□□□□ -0.89
CSTF2-201ENST00000372972 IGHV3-30-3P0DP02 117 aa9.51□□□□□ -0.89
CSTF2-201ENST00000372972 UBE2D1P51668 147 aa9.51□□□□□ -0.89
CSTF2-201ENST00000372972 GTSF1LQ9H1H1 148 aa9.51□□□□□ -0.89
CSTF2-201ENST00000372972 CSDC2Q9Y534 153 aaKnown RBP9.51□□□□□ -0.89
CSTF2-201ENST00000372972 SPCS1Q9Y6A9 102 aa9.51□□□□□ -0.89
CSTF2-201ENST00000372972 SMAGPQ0VAQ4 97 aa9.5□□□□□ -0.89
CSTF2-201ENST00000372972 GEMIN7Q9H840 131 aaKnown RBP9.5□□□□□ -0.89
CSTF2-201ENST00000372972 IGHV1-58A0A0C4DH39 117 aa9.5□□□□□ -0.89
CSTF2-201ENST00000372972 LINC00694P0DN24 101 aa9.5□□□□□ -0.89
CSTF2-201ENST00000372972 TIRAPP58753 221 aa9.5□□□□□ -0.89
CSTF2-201ENST00000372972 FHL2Q14192 279 aa9.5□□□□□ -0.89
CSTF2-201ENST00000372972 SBSPONQ8IVN8 264 aa9.5□□□□□ -0.89
CSTF2-201ENST00000372972 SMIM9A6NGZ8 99 aa9.49□□□□□ -0.89
CSTF2-201ENST00000372972 IGHV3-30P01768 117 aa9.49□□□□□ -0.89
CSTF2-201ENST00000372972 IGHV3-30-5P0DP03 117 aa9.49□□□□□ -0.89
CSTF2-201ENST00000372972 KIR2DL5BQ8NHK3 375 aa9.49□□□□□ -0.89
CSTF2-201ENST00000372972 LOC100131303A0A0U1RQF7 123 aa9.48□□□□□ -0.89
CSTF2-201ENST00000372972 PRIMA1Q86XR5 153 aa9.48□□□□□ -0.89
CSTF2-201ENST00000372972 WFDC9Q8NEX5 89 aa9.48□□□□□ -0.89
CSTF2-201ENST00000372972 VSIG2Q96IQ7 327 aa9.48□□□□□ -0.89
CSTF2-201ENST00000372972 NOTCH3Q9UM47 2321 aa9.48□□□□□ -0.89
CSTF2-201ENST00000372972 TRAV8-3A0A0A6YYJ7 113 aa9.48□□□□□ -0.89
CSTF2-201ENST00000372972 LINC00612Q8N6U2 182 aa9.47□□□□□ -0.89
CSTF2-201ENST00000372972 TMEM243Q9BU79 118 aa9.47□□□□□ -0.89
CSTF2-201ENST00000372972 X6R8D5 127 aa9.47□□□□□ -0.89
CSTF2-201ENST00000372972 IGLV5-45A0A087WSX0 123 aa9.46□□□□□ -0.89
CSTF2-201ENST00000372972 DEFB130BP0DP73 79 aa9.46□□□□□ -0.89
CSTF2-201ENST00000372972 DEFB130AP0DP74 79 aa9.46□□□□□ -0.89
CSTF2-201ENST00000372972 FAM19A3Q7Z5A8 133 aa9.46□□□□□ -0.89
CSTF2-201ENST00000372972 C10orf126Q8N4M7 172 aa9.46□□□□□ -0.89
CSTF2-201ENST00000372972 CDKN2A-AS1Q9UH64 79 aa9.46□□□□□ -0.89
CSTF2-201ENST00000372972 A0A0J9YXY3 114 aa9.46□□□□□ -0.9
CSTF2-201ENST00000372972 H7C423 109 aa9.46□□□□□ -0.9
CSTF2-201ENST00000372972 UBE2L6O14933 153 aa9.46□□□□□ -0.9
CSTF2-201ENST00000372972 SPINK8P0C7L1 97 aa9.46□□□□□ -0.9
CSTF2-201ENST00000372972 HERVK_113P63121 156 aa9.46□□□□□ -0.9
CSTF2-201ENST00000372972 CDC42SE2Q9NRR3 84 aa9.46□□□□□ -0.9
CSTF2-201ENST00000372972 TMEM238C9JI98 176 aa9.45□□□□□ -0.9
CSTF2-201ENST00000372972 TMEM101Q96IK0 257 aa9.45□□□□□ -0.9
CSTF2-201ENST00000372972 COX6A2Q02221 97 aa9.44□□□□□ -0.9
CSTF2-201ENST00000372972 LINC00242Q5T6M2 205 aa9.44□□□□□ -0.9
CSTF2-201ENST00000372972 NDUFA12Q9UI09 145 aa9.44□□□□□ -0.9
CSTF2-201ENST00000372972 APOMO95445 188 aa9.44□□□□□ -0.9
CSTF2-201ENST00000372972 APOC4P55056 127 aa9.44□□□□□ -0.9
CSTF2-201ENST00000372972 C3orf56Q8N813 242 aa9.44□□□□□ -0.9
CSTF2-201ENST00000372972 PGPEP1Q9NXJ5 209 aa9.44□□□□□ -0.9
CSTF2-201ENST00000372972 FBN1P35555 2871 aaKnown RBP9.43□□□□□ -0.9
CSTF2-201ENST00000372972 TRBV6-8A0A0A6YYG3 113 aa9.43□□□□□ -0.9
CSTF2-201ENST00000372972 TRAV13-1A0A0B4J241 112 aa9.43□□□□□ -0.9
CSTF2-201ENST00000372972 A8MZ25 164 aa9.43□□□□□ -0.9
CSTF2-201ENST00000372972 CFC1BP0CG36 223 aa9.43□□□□□ -0.9
CSTF2-201ENST00000372972 CFC1P0CG37 223 aa9.43□□□□□ -0.9
CSTF2-201ENST00000372972 ZFAND6Q6FIF0 208 aa9.43□□□□□ -0.9
CSTF2-201ENST00000372972 WIPF1O43516 503 aa9.42□□□□□ -0.9
CSTF2-201ENST00000372972 RPL24P83731 157 aaKnown RBP9.42□□□□□ -0.9
CSTF2-201ENST00000372972 MUSTN1Q8IVN3 82 aa9.42□□□□□ -0.9
CSTF2-201ENST00000372972 LYRM9A8MSI8 78 aa9.41□□□□□ -0.9
CSTF2-201ENST00000372972 SHISA2Q6UWI4 295 aa9.41□□□□□ -0.9
CSTF2-201ENST00000372972 LITAFQ99732 161 aa9.41□□□□□ -0.9
CSTF2-201ENST00000372972 A4D1N5 150 aa9.41□□□□□ -0.9
CSTF2-201ENST00000372972 TSPAN13O95857 204 aa9.41□□□□□ -0.9
CSTF2-201ENST00000372972 DEFB135Q30KP9 77 aa9.41□□□□□ -0.9
CSTF2-201ENST00000372972 IGLV5-39A0A0G2JS06 123 aa9.4□□□□□ -0.9
CSTF2-201ENST00000372972 GAGE6Q13070 117 aa9.4□□□□□ -0.9
CSTF2-201ENST00000372972 OCIAD2Q56VL3 154 aa9.4□□□□□ -0.9
CSTF2-201ENST00000372972 FAM222AQ5U5X8 452 aa9.4□□□□□ -0.9
CSTF2-201ENST00000372972 PRO1854Q9UHT4 67 aa9.4□□□□□ -0.9
CSTF2-201ENST00000372972 GYPEP15421 78 aa9.39□□□□□ -0.91
CSTF2-201ENST00000372972 PRO0255Q9UI72 69 aa9.39□□□□□ -0.91
CSTF2-201ENST00000372972 NDUFA1O15239 70 aa9.39□□□□□ -0.91
CSTF2-201ENST00000372972 ATP6V0E2Q8NHE4 81 aa9.39□□□□□ -0.91
CSTF2-201ENST00000372972 CHCHD5Q9BSY4 110 aa9.39□□□□□ -0.91
CSTF2-201ENST00000372972 SPANXDQ9BXN6 97 aa9.39□□□□□ -0.91
CSTF2-201ENST00000372972 SPANXCQ9NY87 97 aa9.39□□□□□ -0.91
CSTF2-201ENST00000372972 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.38□□□□□ -0.91
CSTF2-201ENST00000372972 SMIM1B2RUZ4 78 aa9.38□□□□□ -0.91
CSTF2-201ENST00000372972 TIMM17BO60830 172 aa9.38□□□□□ -0.91
CSTF2-201ENST00000372972 PRSS2P07478 247 aa9.38□□□□□ -0.91
CSTF2-201ENST00000372972 OXLD1Q5BKU9 147 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms