RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 Q6ZUT4 128 aa8.5□□□□□ -1.05
PDE6C-201ENST00000371447 DEFB4AO15263 64 aa8.49□□□□□ -1.05
PDE6C-201ENST00000371447 TSPAN13O95857 204 aa8.49□□□□□ -1.05
PDE6C-201ENST00000371447 DAND5Q8N907 189 aa8.49□□□□□ -1.05
PDE6C-201ENST00000371447 TM2D2Q9BX73 214 aa8.49□□□□□ -1.05
PDE6C-201ENST00000371447 KMT2BQ9UMN6 2715 aaPredicted RBP8.48□□□□□ -1.05
PDE6C-201ENST00000371447 RRN3P1Q2M238 152 aa8.48□□□□□ -1.05
PDE6C-201ENST00000371447 SPATA3Q8NHX4 192 aa8.48□□□□□ -1.05
PDE6C-201ENST00000371447 TRBV7-3A0A075B6L6 115 aa8.48□□□□□ -1.05
PDE6C-201ENST00000371447 LY6G6DO95868 133 aa8.48□□□□□ -1.05
PDE6C-201ENST00000371447 ZNF22P17026 224 aaPredicted RBP8.48□□□□□ -1.05
PDE6C-201ENST00000371447 TMEM86BQ8N661 226 aa8.48□□□□□ -1.05
PDE6C-201ENST00000371447 C3orf56Q8N813 242 aa8.48□□□□□ -1.05
PDE6C-201ENST00000371447 TRRAPQ9Y4A5 3859 aa8.48□□□□□ -1.05
PDE6C-201ENST00000371447 A0A096LPF7 62 aa8.47□□□□□ -1.05
PDE6C-201ENST00000371447 WFDC2Q14508 124 aa8.47□□□□□ -1.05
PDE6C-201ENST00000371447 RHOHQ15669 191 aa8.47□□□□□ -1.05
PDE6C-201ENST00000371447 SH2D6Q7Z4S9 175 aa8.47□□□□□ -1.05
PDE6C-201ENST00000371447 A0A0J9YY99 117 aa8.47□□□□□ -1.05
PDE6C-201ENST00000371447 RHODO00212 210 aa8.47□□□□□ -1.05
PDE6C-201ENST00000371447 SCGB1C2P0DMR2 95 aa8.47□□□□□ -1.05
PDE6C-201ENST00000371447 LINC00694P0DN24 101 aa8.47□□□□□ -1.05
PDE6C-201ENST00000371447 LINC00482Q8N8I6 264 aa8.47□□□□□ -1.05
PDE6C-201ENST00000371447 PSMB2P49721 201 aa8.46□□□□□ -1.05
PDE6C-201ENST00000371447 C5orf47Q569G3 176 aa8.46□□□□□ -1.05
PDE6C-201ENST00000371447 TRAV25A0A0B4J276 109 aa8.46□□□□□ -1.06
PDE6C-201ENST00000371447 RNASE1P07998 156 aaKnown RBP8.46□□□□□ -1.06
PDE6C-201ENST00000371447 Q1RN00 199 aa8.46□□□□□ -1.06
PDE6C-201ENST00000371447 PAPPA-AS1Q5QFB9 102 aa8.46□□□□□ -1.06
PDE6C-201ENST00000371447 TIMM21Q9BVV7 248 aa8.46□□□□□ -1.06
PDE6C-201ENST00000371447 FHL3Q13643 280 aa8.46□□□□□ -1.06
PDE6C-201ENST00000371447 SLC25A29Q8N8R3 303 aa8.46□□□□□ -1.06
PDE6C-201ENST00000371447 ETDBQ3ZM63 59 aa8.45□□□□□ -1.06
PDE6C-201ENST00000371447 UFSP1Q6NVU6 142 aa8.45□□□□□ -1.06
PDE6C-201ENST00000371447 TEX29Q8N6K0 151 aa8.45□□□□□ -1.06
PDE6C-201ENST00000371447 ANK3Q12955 4377 aaKnown RBP8.45□□□□□ -1.06
PDE6C-201ENST00000371447 TRGV4A0A0C4DH28 118 aa8.45□□□□□ -1.06
PDE6C-201ENST00000371447 IGHV3-30-3P0DP02 117 aa8.45□□□□□ -1.06
PDE6C-201ENST00000371447 CHCHD7Q9BUK0 85 aa8.45□□□□□ -1.06
PDE6C-201ENST00000371447 C1QTNF4Q9BXJ3 329 aa8.45□□□□□ -1.06
PDE6C-201ENST00000371447 MAST4O15021 2626 aa8.45□□□□□ -1.06
PDE6C-201ENST00000371447 STAB1Q9NY15 2570 aa8.45□□□□□ -1.06
PDE6C-201ENST00000371447 KRTAP10-3P60369 221 aa8.44□□□□□ -1.06
PDE6C-201ENST00000371447 MRPL23Q16540 153 aaKnown RBP8.44□□□□□ -1.06
PDE6C-201ENST00000371447 TMEM223A0PJW6 202 aa8.44□□□□□ -1.06
PDE6C-201ENST00000371447 CDKN2A-AS1Q9UH64 79 aa8.44□□□□□ -1.06
PDE6C-201ENST00000371447 HILS1P60008 231 aa8.43□□□□□ -1.06
PDE6C-201ENST00000371447 RPL36AP83881 106 aaKnown RBP8.43□□□□□ -1.06
PDE6C-201ENST00000371447 RPL36ALQ969Q0 106 aaKnown RBP8.43□□□□□ -1.06
PDE6C-201ENST00000371447 GIG44P09565 113 aaPredicted RBP8.43□□□□□ -1.06
PDE6C-201ENST00000371447 MUSTN1Q8IVN3 82 aa8.43□□□□□ -1.06
PDE6C-201ENST00000371447 UBE2D4Q9Y2X8 147 aa8.43□□□□□ -1.06
PDE6C-201ENST00000371447 TRBV20-1A0A075B6N2 111 aa8.42□□□□□ -1.06
PDE6C-201ENST00000371447 C10orf126Q8N4M7 172 aa8.42□□□□□ -1.06
PDE6C-201ENST00000371447 FAM104AQ969W3 186 aa8.42□□□□□ -1.06
PDE6C-201ENST00000371447 COX6A2Q02221 97 aa8.42□□□□□ -1.06
PDE6C-201ENST00000371447 NDUFA12Q9UI09 145 aa8.42□□□□□ -1.06
PDE6C-201ENST00000371447 NOTCH1P46531 2555 aa8.42□□□□□ -1.06
PDE6C-201ENST00000371447 RS1O15537 224 aa8.41□□□□□ -1.06
PDE6C-201ENST00000371447 CRLF1O75462 422 aa8.41□□□□□ -1.06
PDE6C-201ENST00000371447 PTH2Q96A98 100 aa8.41□□□□□ -1.06
PDE6C-201ENST00000371447 A0A1B0GWB2 263 aa8.41□□□□□ -1.06
PDE6C-201ENST00000371447 UBE2L6O14933 153 aa8.41□□□□□ -1.06
PDE6C-201ENST00000371447 TAL2Q16559 108 aa8.41□□□□□ -1.06
PDE6C-201ENST00000371447 TMEM263Q8WUH6 116 aaKnown RBP8.41□□□□□ -1.06
PDE6C-201ENST00000371447 TOMM7Q9P0U1 55 aa8.41□□□□□ -1.06
PDE6C-201ENST00000371447 LEPROTO15243 131 aa8.41□□□□□ -1.06
PDE6C-201ENST00000371447 IGLV1-51P01701 117 aa8.41□□□□□ -1.06
PDE6C-201ENST00000371447 CFC1BP0CG36 223 aa8.41□□□□□ -1.06
PDE6C-201ENST00000371447 CFC1P0CG37 223 aa8.41□□□□□ -1.06
PDE6C-201ENST00000371447 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.41□□□□□ -1.06
PDE6C-201ENST00000371447 OR5A1Q8NGJ0 315 aa8.41□□□□□ -1.06
PDE6C-201ENST00000371447 ERG28Q9UKR5 140 aa8.41□□□□□ -1.06
PDE6C-201ENST00000371447 K7EQD1 137 aa8.4□□□□□ -1.06
PDE6C-201ENST00000371447 CLPSL2Q6UWE3 100 aa8.4□□□□□ -1.06
PDE6C-201ENST00000371447 IGHV3-30P01768 117 aa8.4□□□□□ -1.07
PDE6C-201ENST00000371447 IGHV3-30-5P0DP03 117 aa8.4□□□□□ -1.07
PDE6C-201ENST00000371447 NTM-AS1Q6ZSK4 140 aa8.4□□□□□ -1.07
PDE6C-201ENST00000371447 NFE4Q86UQ8 179 aa8.4□□□□□ -1.07
PDE6C-201ENST00000371447 C11orf68Q9H3H3 251 aaKnown RBP8.4□□□□□ -1.07
PDE6C-201ENST00000371447 HTN3P15516 51 aa8.39□□□□□ -1.07
PDE6C-201ENST00000371447 ADAMTSL4-AS1Q5T5F5 129 aa8.39□□□□□ -1.07
PDE6C-201ENST00000371447 NDUFA11Q86Y39 141 aa8.39□□□□□ -1.07
PDE6C-201ENST00000371447 CHCHD5Q9BSY4 110 aa8.39□□□□□ -1.07
PDE6C-201ENST00000371447 A0A0J9YXY3 114 aa8.39□□□□□ -1.07
PDE6C-201ENST00000371447 A8MTW9 85 aa8.39□□□□□ -1.07
PDE6C-201ENST00000371447 INSL3P51460 131 aa8.39□□□□□ -1.07
PDE6C-201ENST00000371447 AMELXQ99217 191 aa8.39□□□□□ -1.07
PDE6C-201ENST00000371447 TMEM262E9PQX1 116 aa8.39□□□□□ -1.07
PDE6C-201ENST00000371447 BEAN1Q3B7T3 259 aa8.38□□□□□ -1.07
PDE6C-201ENST00000371447 MT-ATP8P03928 68 aa8.38□□□□□ -1.07
PDE6C-201ENST00000371447 DEFB135Q30KP9 77 aa8.38□□□□□ -1.07
PDE6C-201ENST00000371447 CSDC2Q9Y534 153 aaKnown RBP8.38□□□□□ -1.07
PDE6C-201ENST00000371447 EIF4EBP3O60516 100 aaPredicted RBP8.37□□□□□ -1.07
PDE6C-201ENST00000371447 SPANXA1Q9NS26 97 aa8.37□□□□□ -1.07
PDE6C-201ENST00000371447 C19orf73Q9NVV2 129 aa8.37□□□□□ -1.07
PDE6C-201ENST00000371447 FBN1P35555 2871 aaKnown RBP8.37□□□□□ -1.07
PDE6C-201ENST00000371447 CCDC179H3BU77 68 aa8.36□□□□□ -1.07
PDE6C-201ENST00000371447 MRPS36P82909 103 aaKnown RBP8.36□□□□□ -1.07
PDE6C-201ENST00000371447 PRO1854Q9UHT4 67 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms