RNA–Protein interactions for RNA: ENST00000355547.9

PDZD3-202, Transcript of PDZ domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZD3, Length 2,252 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD3-202ENST00000355547 TMEM61Q8N0U2 210 aa13.13□□□□□ -0.31
PDZD3-202ENST00000355547 Q8N2B8 174 aa13.13□□□□□ -0.31
PDZD3-202ENST00000355547 BEX4Q9NWD9 120 aaPredicted RBP13.13□□□□□ -0.31
PDZD3-202ENST00000355547 ANKRD17O75179 2603 aaKnown RBP13.12□□□□□ -0.31
PDZD3-202ENST00000355547 NACAE9PAV3 2078 aa13.12□□□□□ -0.31
PDZD3-202ENST00000355547 IFITM1P13164 125 aa13.11□□□□□ -0.31
PDZD3-202ENST00000355547 HERV-K104P63124 156 aa13.11□□□□□ -0.31
PDZD3-202ENST00000355547 Q1RN00 199 aa13.11□□□□□ -0.31
PDZD3-202ENST00000355547 LINC01620Q4KN68 170 aa13.11□□□□□ -0.31
PDZD3-202ENST00000355547 PEMTQ9UBM1 199 aa13.11□□□□□ -0.31
PDZD3-202ENST00000355547 PRSS2P07478 247 aa13.1□□□□□ -0.31
PDZD3-202ENST00000355547 MIAQ16674 131 aa13.1□□□□□ -0.31
PDZD3-202ENST00000355547 MAP6D1Q9H9H5 199 aa13.1□□□□□ -0.31
PDZD3-202ENST00000355547 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.1□□□□□ -0.31
PDZD3-202ENST00000355547 IGKV2-29A2NJV5 120 aaPredicted RBP13.1□□□□□ -0.31
PDZD3-202ENST00000355547 TRIAP1O43715 76 aa13.1□□□□□ -0.31
PDZD3-202ENST00000355547 TTC32Q5I0X7 151 aa13.1□□□□□ -0.31
PDZD3-202ENST00000355547 PRRC2AP48634 2157 aaKnown RBP13.09□□□□□ -0.31
PDZD3-202ENST00000355547 CCDC179H3BU77 68 aa13.09□□□□□ -0.31
PDZD3-202ENST00000355547 RS1O15537 224 aa13.09□□□□□ -0.31
PDZD3-202ENST00000355547 IGHV4-31P0DP07 118 aa13.09□□□□□ -0.31
PDZD3-202ENST00000355547 NAV2Q8IVL1 2488 aa13.09□□□□□ -0.31
PDZD3-202ENST00000355547 TIMM17BO60830 172 aa13.09□□□□□ -0.31
PDZD3-202ENST00000355547 LINC01587Q99440 93 aa13.09□□□□□ -0.31
PDZD3-202ENST00000355547 TRAV4A0A0B4J268 109 aa13.08□□□□□ -0.32
PDZD3-202ENST00000355547 C4orf3Q8WVX3 66 aa13.08□□□□□ -0.32
PDZD3-202ENST00000355547 IGLV5-45A0A087WSX0 123 aa13.08□□□□□ -0.32
PDZD3-202ENST00000355547 A8MZ25 164 aa13.08□□□□□ -0.32
PDZD3-202ENST00000355547 TIRAPP58753 221 aa13.08□□□□□ -0.32
PDZD3-202ENST00000355547 SMIM20Q8N5G0 67 aa13.07□□□□□ -0.32
PDZD3-202ENST00000355547 TRBV10-2A0A0K0K1G8 114 aa13.06□□□□□ -0.32
PDZD3-202ENST00000355547 FLNBO75369 2602 aaKnown RBP13.06□□□□□ -0.32
PDZD3-202ENST00000355547 INSP01308 110 aa13.06□□□□□ -0.32
PDZD3-202ENST00000355547 DEFB114Q30KQ6 69 aa13.06□□□□□ -0.32
PDZD3-202ENST00000355547 YAE1D1Q9NRH1 226 aa13.06□□□□□ -0.32
PDZD3-202ENST00000355547 ICOSQ9Y6W8 199 aa13.06□□□□□ -0.32
PDZD3-202ENST00000355547 IGHV3-38A0A0C4DH36 116 aa13.05□□□□□ -0.32
PDZD3-202ENST00000355547 RPL13AP40429 203 aaKnown RBP13.05□□□□□ -0.32
PDZD3-202ENST00000355547 ZANQ9Y493 2812 aa13.05□□□□□ -0.32
PDZD3-202ENST00000355547 CRLF1O75462 422 aa13.05□□□□□ -0.32
PDZD3-202ENST00000355547 NTN5Q8WTR8 489 aaPredicted RBP13.05□□□□□ -0.32
PDZD3-202ENST00000355547 CDKN2A-AS1Q9UH64 79 aa13.05□□□□□ -0.32
PDZD3-202ENST00000355547 PDZD2O15018 2839 aa13.04□□□□□ -0.32
PDZD3-202ENST00000355547 BAHCC1Q9P281 2608 aa13.04□□□□□ -0.32
PDZD3-202ENST00000355547 CCDC168Q8NDH2 2452 aa13.04□□□□□ -0.32
PDZD3-202ENST00000355547 DYNLRB2Q8TF09 96 aa13.04□□□□□ -0.32
PDZD3-202ENST00000355547 NOTCH2Q04721 2471 aa13.03□□□□□ -0.32
PDZD3-202ENST00000355547 NDUFA1O15239 70 aa13.03□□□□□ -0.32
PDZD3-202ENST00000355547 MRPL23Q16540 153 aaKnown RBP13.03□□□□□ -0.32
PDZD3-202ENST00000355547 MXRA5Q9NR99 2828 aa13.03□□□□□ -0.32
PDZD3-202ENST00000355547 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.02□□□□□ -0.32
PDZD3-202ENST00000355547 TMEM101Q96IK0 257 aa13.02□□□□□ -0.32
PDZD3-202ENST00000355547 ZNF469Q96JG9 3925 aaPredicted RBP13.02□□□□□ -0.33
PDZD3-202ENST00000355547 COX6CP09669 75 aa13.01□□□□□ -0.33
PDZD3-202ENST00000355547 IGHV3OR16-12A0A075B7B8 117 aa13.01□□□□□ -0.33
PDZD3-202ENST00000355547 IGLV5-39A0A0G2JS06 123 aa13.01□□□□□ -0.33
PDZD3-202ENST00000355547 TRAV8-4A0A0B4J246 113 aa13□□□□□ -0.33
PDZD3-202ENST00000355547 H7C423 109 aa13□□□□□ -0.33
PDZD3-202ENST00000355547 FAM19A3Q7Z5A8 133 aa13□□□□□ -0.33
PDZD3-202ENST00000355547 IL17DQ8TAD2 202 aa13□□□□□ -0.33
PDZD3-202ENST00000355547 COX6A2Q02221 97 aa13□□□□□ -0.33
PDZD3-202ENST00000355547 Q6ZSV7 163 aa13□□□□□ -0.33
PDZD3-202ENST00000355547 TEX49A0A1B0GTD5 131 aa12.99□□□□□ -0.33
PDZD3-202ENST00000355547 NPC2P61916 151 aa12.99□□□□□ -0.33
PDZD3-202ENST00000355547 DGAT2L7PQ6IED9 249 aa12.99□□□□□ -0.33
PDZD3-202ENST00000355547 AKAP9Q99996 3911 aa12.99□□□□□ -0.33
PDZD3-202ENST00000355547 H3BT86 120 aa12.99□□□□□ -0.33
PDZD3-202ENST00000355547 ODF3L2Q3SX64 289 aa12.99□□□□□ -0.33
PDZD3-202ENST00000355547 C15orf53Q8NAA6 179 aa12.99□□□□□ -0.33
PDZD3-202ENST00000355547 CR1P17927 2039 aa12.98□□□□□ -0.33
PDZD3-202ENST00000355547 HERVK_113P63121 156 aa12.98□□□□□ -0.33
PDZD3-202ENST00000355547 LINC00242Q5T6M2 205 aa12.98□□□□□ -0.33
PDZD3-202ENST00000355547 C2orf82Q6UX34 121 aa12.98□□□□□ -0.33
PDZD3-202ENST00000355547 C1orf158Q8N1D5 194 aa12.98□□□□□ -0.33
PDZD3-202ENST00000355547 XCL2Q9UBD3 114 aa12.98□□□□□ -0.33
PDZD3-202ENST00000355547 LST1O00453 97 aa12.97□□□□□ -0.33
PDZD3-202ENST00000355547 KHDC1LQ5JSQ8 128 aa12.97□□□□□ -0.33
PDZD3-202ENST00000355547 CSDC2Q9Y534 153 aaKnown RBP12.97□□□□□ -0.33
PDZD3-202ENST00000355547 TRAV25A0A0B4J276 109 aa12.97□□□□□ -0.33
PDZD3-202ENST00000355547 UBE2WQ96B02 151 aa12.97□□□□□ -0.33
PDZD3-202ENST00000355547 TMEM126AQ9H061 195 aa12.97□□□□□ -0.33
PDZD3-202ENST00000355547 CIRBPQ14011 172 aaKnown RBP12.96□□□□□ -0.33
PDZD3-202ENST00000355547 DAND5Q8N907 189 aa12.96□□□□□ -0.34
PDZD3-202ENST00000355547 CITED2Q99967 270 aaPredicted RBP12.96□□□□□ -0.34
PDZD3-202ENST00000355547 TRBV10-1A0A0K0K1A3 114 aa12.95□□□□□ -0.34
PDZD3-202ENST00000355547 CLEC2BQ92478 149 aa12.95□□□□□ -0.34
PDZD3-202ENST00000355547 LINC00694P0DN24 101 aa12.95□□□□□ -0.34
PDZD3-202ENST00000355547 DEFB113Q30KQ7 82 aa12.95□□□□□ -0.34
PDZD3-202ENST00000355547 MEIG1Q5JSS6 88 aa12.95□□□□□ -0.34
PDZD3-202ENST00000355547 LINC00308Q8TCZ7 52 aa12.95□□□□□ -0.34
PDZD3-202ENST00000355547 SETXQ7Z333 2677 aaKnown RBP12.94□□□□□ -0.34
PDZD3-202ENST00000355547 FAM240AA0A1B0GVK7 77 aa12.94□□□□□ -0.34
PDZD3-202ENST00000355547 Q9H8V8 135 aa12.94□□□□□ -0.34
PDZD3-202ENST00000355547 TRGV1A0A0A0MS02 117 aa12.93□□□□□ -0.34
PDZD3-202ENST00000355547 STHQ8IWL8 128 aa12.93□□□□□ -0.34
PDZD3-202ENST00000355547 SMIM1B2RUZ4 78 aa12.93□□□□□ -0.34
PDZD3-202ENST00000355547 RPL36AP83881 106 aaKnown RBP12.93□□□□□ -0.34
PDZD3-202ENST00000355547 DEFB121Q5J5C9 76 aa12.93□□□□□ -0.34
PDZD3-202ENST00000355547 NTM-AS1Q6ZSK4 140 aa12.93□□□□□ -0.34
PDZD3-202ENST00000355547 RPL36ALQ969Q0 106 aaKnown RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms