RNA–Protein interactions for RNA: ENST00000350498.7

PDAP1-201, Transcript of PDGFA associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDAP1, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-201ENST00000350498 TRBV20-1A0A075B6N2 111 aa11.98□□□□□ -0.49
PDAP1-201ENST00000350498 TNFRSF18Q9Y5U5 241 aa11.98□□□□□ -0.49
PDAP1-201ENST00000350498 VWFP04275 2813 aa11.97□□□□□ -0.49
PDAP1-201ENST00000350498 KRTAP1-1Q07627 177 aa11.97□□□□□ -0.49
PDAP1-201ENST00000350498 SBSPONQ8IVN8 264 aa11.97□□□□□ -0.49
PDAP1-201ENST00000350498 C1orf158Q8N1D5 194 aa11.97□□□□□ -0.49
PDAP1-201ENST00000350498 NBEAL2Q6ZNJ1 2754 aa11.97□□□□□ -0.49
PDAP1-201ENST00000350498 CCL24O00175 119 aa11.97□□□□□ -0.49
PDAP1-201ENST00000350498 IGHV3-53P01767 116 aa11.97□□□□□ -0.49
PDAP1-201ENST00000350498 PLA2G2AP14555 144 aa11.97□□□□□ -0.49
PDAP1-201ENST00000350498 LYRM7Q5U5X0 104 aa11.97□□□□□ -0.49
PDAP1-201ENST00000350498 LINC00467Q9BRT7 94 aa11.96□□□□□ -0.49
PDAP1-201ENST00000350498 CRYBA4P53673 196 aa11.96□□□□□ -0.5
PDAP1-201ENST00000350498 ZNF415Q09FC8 603 aa11.96□□□□□ -0.5
PDAP1-201ENST00000350498 CHCHD7Q9BUK0 85 aa11.96□□□□□ -0.5
PDAP1-201ENST00000350498 FN1P02751 2386 aaKnown RBP11.95□□□□□ -0.5
PDAP1-201ENST00000350498 SMR3AQ99954 134 aa11.95□□□□□ -0.5
PDAP1-201ENST00000350498 TRIAP1O43715 76 aa11.95□□□□□ -0.5
PDAP1-201ENST00000350498 CIDEAO60543 219 aa11.95□□□□□ -0.5
PDAP1-201ENST00000350498 MRPS36P82909 103 aaKnown RBP11.95□□□□□ -0.5
PDAP1-201ENST00000350498 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.94□□□□□ -0.5
PDAP1-201ENST00000350498 YAE1D1Q9NRH1 226 aa11.94□□□□□ -0.5
PDAP1-201ENST00000350498 NDUFA12Q9UI09 145 aa11.94□□□□□ -0.5
PDAP1-201ENST00000350498 GCN1Q92616 2671 aaKnown RBP11.94□□□□□ -0.5
PDAP1-201ENST00000350498 NTN5Q8WTR8 489 aaPredicted RBP11.94□□□□□ -0.5
PDAP1-201ENST00000350498 UBE2D4Q9Y2X8 147 aa11.94□□□□□ -0.5
PDAP1-201ENST00000350498 A0A0B4J2C4 111 aa11.93□□□□□ -0.5
PDAP1-201ENST00000350498 A0A1B0GV72 72 aa11.93□□□□□ -0.5
PDAP1-201ENST00000350498 INSP01308 110 aa11.93□□□□□ -0.5
PDAP1-201ENST00000350498 LINC01006Q8NI28 216 aa11.93□□□□□ -0.5
PDAP1-201ENST00000350498 TEX49A0A1B0GTD5 131 aa11.93□□□□□ -0.5
PDAP1-201ENST00000350498 STHQ8IWL8 128 aa11.93□□□□□ -0.5
PDAP1-201ENST00000350498 IGHV1-58A0A0C4DH39 117 aa11.92□□□□□ -0.5
PDAP1-201ENST00000350498 A0A0U1RRA0 63 aa11.92□□□□□ -0.5
PDAP1-201ENST00000350498 NDUFA7O95182 113 aa11.92□□□□□ -0.5
PDAP1-201ENST00000350498 TRGV1A0A0A0MS02 117 aa11.92□□□□□ -0.5
PDAP1-201ENST00000350498 Q6ZTI0 123 aa11.92□□□□□ -0.5
PDAP1-201ENST00000350498 GEMIN7Q9H840 131 aaKnown RBP11.91□□□□□ -0.5
PDAP1-201ENST00000350498 CDKN2A-AS1Q9UH64 79 aa11.91□□□□□ -0.5
PDAP1-201ENST00000350498 PYGO1Q9Y3Y4 419 aa11.91□□□□□ -0.5
PDAP1-201ENST00000350498 CLEC2BQ92478 149 aa11.91□□□□□ -0.5
PDAP1-201ENST00000350498 ZNF625Q96I27 306 aaPredicted RBP11.91□□□□□ -0.5
PDAP1-201ENST00000350498 VSIG2Q96IQ7 327 aa11.91□□□□□ -0.5
PDAP1-201ENST00000350498 OTOGQ6ZRI0 2925 aa11.9□□□□□ -0.5
PDAP1-201ENST00000350498 LINC01620Q4KN68 170 aa11.9□□□□□ -0.5
PDAP1-201ENST00000350498 TRAV26-1A0A087WT03 109 aa11.9□□□□□ -0.5
PDAP1-201ENST00000350498 COX6A2Q02221 97 aa11.9□□□□□ -0.5
PDAP1-201ENST00000350498 RPL35AP18077 110 aaKnown RBP11.89□□□□□ -0.51
PDAP1-201ENST00000350498 CLUHP3Q96NS8 147 aa11.89□□□□□ -0.51
PDAP1-201ENST00000350498 GIG44P09565 113 aaPredicted RBP11.89□□□□□ -0.51
PDAP1-201ENST00000350498 LINC00694P0DN24 101 aa11.89□□□□□ -0.51
PDAP1-201ENST00000350498 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.88□□□□□ -0.51
PDAP1-201ENST00000350498 RS1O15537 224 aa11.88□□□□□ -0.51
PDAP1-201ENST00000350498 BEAN1Q3B7T3 259 aa11.88□□□□□ -0.51
PDAP1-201ENST00000350498 TMEM86BQ8N661 226 aa11.88□□□□□ -0.51
PDAP1-201ENST00000350498 CRLF1O75462 422 aa11.88□□□□□ -0.51
PDAP1-201ENST00000350498 EDA2RQ9HAV5 297 aa11.88□□□□□ -0.51
PDAP1-201ENST00000350498 ATXN8Q156A1 80 aa11.87□□□□□ -0.51
PDAP1-201ENST00000350498 NOP10Q9NPE3 64 aaKnown RBP11.87□□□□□ -0.51
PDAP1-201ENST00000350498 ICOSQ9Y6W8 199 aa11.87□□□□□ -0.51
PDAP1-201ENST00000350498 TENM1Q9UKZ4 2725 aa11.87□□□□□ -0.51
PDAP1-201ENST00000350498 HIVEP2P31629 2446 aa11.86□□□□□ -0.51
PDAP1-201ENST00000350498 TINCRA0A1B0GVN0 87 aa11.86□□□□□ -0.51
PDAP1-201ENST00000350498 KMT2BQ9UMN6 2715 aaPredicted RBP11.85□□□□□ -0.51
PDAP1-201ENST00000350498 MIAQ16674 131 aa11.85□□□□□ -0.51
PDAP1-201ENST00000350498 TRBV30A0A0K0K1B3 111 aa11.85□□□□□ -0.51
PDAP1-201ENST00000350498 LOC100131303A0A0U1RQF7 123 aa11.85□□□□□ -0.51
PDAP1-201ENST00000350498 RNF183Q96D59 192 aa11.85□□□□□ -0.51
PDAP1-201ENST00000350498 TMEM101Q96IK0 257 aa11.85□□□□□ -0.51
PDAP1-201ENST00000350498 NTM-AS1Q6ZSK4 140 aa11.84□□□□□ -0.51
PDAP1-201ENST00000350498 TRAV4A0A0B4J268 109 aa11.84□□□□□ -0.51
PDAP1-201ENST00000350498 H7C423 109 aa11.84□□□□□ -0.51
PDAP1-201ENST00000350498 GAGE12JA6NER3 117 aa11.83□□□□□ -0.52
PDAP1-201ENST00000350498 GAGE4Q13068 117 aa11.83□□□□□ -0.52
PDAP1-201ENST00000350498 GAGE5Q13069 117 aa11.83□□□□□ -0.52
PDAP1-201ENST00000350498 IL17DQ8TAD2 202 aa11.83□□□□□ -0.52
PDAP1-201ENST00000350498 SPANXDQ9BXN6 97 aa11.83□□□□□ -0.52
PDAP1-201ENST00000350498 SPANXA1Q9NS26 97 aa11.83□□□□□ -0.52
PDAP1-201ENST00000350498 SPANXCQ9NY87 97 aa11.83□□□□□ -0.52
PDAP1-201ENST00000350498 RPL13AP40429 203 aaKnown RBP11.83□□□□□ -0.52
PDAP1-201ENST00000350498 ZFAND6Q6FIF0 208 aa11.83□□□□□ -0.52
PDAP1-201ENST00000350498 DGAT2L7PQ6IED9 249 aa11.82□□□□□ -0.52
PDAP1-201ENST00000350498 KRTAP10-3P60369 221 aa11.82□□□□□ -0.52
PDAP1-201ENST00000350498 C2orf82Q6UX34 121 aa11.82□□□□□ -0.52
PDAP1-201ENST00000350498 TRAV13-1A0A0B4J241 112 aa11.81□□□□□ -0.52
PDAP1-201ENST00000350498 TRBV10-2A0A0K0K1G8 114 aa11.81□□□□□ -0.52
PDAP1-201ENST00000350498 GAGE7O76087 117 aa11.81□□□□□ -0.52
PDAP1-201ENST00000350498 GAGE12FP0CL80 117 aa11.81□□□□□ -0.52
PDAP1-201ENST00000350498 GAGE12GP0CL81 117 aa11.81□□□□□ -0.52
PDAP1-201ENST00000350498 GAGE12IP0CL82 117 aa11.81□□□□□ -0.52
PDAP1-201ENST00000350498 SPATA3Q8NHX4 192 aa11.81□□□□□ -0.52
PDAP1-201ENST00000350498 C19orf73Q9NVV2 129 aa11.81□□□□□ -0.52
PDAP1-201ENST00000350498 PLAC8L1A1L4L8 177 aa11.81□□□□□ -0.52
PDAP1-201ENST00000350498 Q9H8V8 135 aa11.81□□□□□ -0.52
PDAP1-201ENST00000350498 TRAV25A0A0B4J276 109 aa11.8□□□□□ -0.52
PDAP1-201ENST00000350498 PIK3CD-AS1Q5SR53 167 aa11.8□□□□□ -0.52
PDAP1-201ENST00000350498 RNASE1P07998 156 aaKnown RBP11.8□□□□□ -0.52
PDAP1-201ENST00000350498 LINC00242Q5T6M2 205 aa11.8□□□□□ -0.52
PDAP1-201ENST00000350498 TRRAPQ9Y4A5 3859 aa11.79□□□□□ -0.52
PDAP1-201ENST00000350498 CITED1Q99966 193 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms