RNA–Protein interactions for RNA: ENST00000345057.8

TRADD-201, Transcript of TNFRSF1A associated via death domain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRADD, Length 1,877 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-201ENST00000345057 SBSPONQ8IVN8 264 aa17.78■□□□□ 0.44
TRADD-201ENST00000345057 ATP5G1P05496 136 aa17.77■□□□□ 0.43
TRADD-201ENST00000345057 TMEM170BQ5T4T1 132 aa17.77■□□□□ 0.43
TRADD-201ENST00000345057 FAM104AQ969W3 186 aa17.77■□□□□ 0.43
TRADD-201ENST00000345057 HIGD1BQ9P298 99 aa17.75■□□□□ 0.43
TRADD-201ENST00000345057 GYPEP15421 78 aa17.75■□□□□ 0.43
TRADD-201ENST00000345057 HINT1P49773 126 aaPredicted RBP17.75■□□□□ 0.43
TRADD-201ENST00000345057 Q6ZUT4 128 aa17.75■□□□□ 0.43
TRADD-201ENST00000345057 TRAV8-6A0A0B4J262 113 aa17.74■□□□□ 0.43
TRADD-201ENST00000345057 PAX4O43316 350 aa17.74■□□□□ 0.43
TRADD-201ENST00000345057 COL5A1-AS1Q5SY13 56 aa17.74■□□□□ 0.43
TRADD-201ENST00000345057 TMEM101Q96IK0 257 aa17.74■□□□□ 0.43
TRADD-201ENST00000345057 TRBV6-8A0A0A6YYG3 113 aa17.73■□□□□ 0.43
TRADD-201ENST00000345057 AMMECR1LQ6DCA0 310 aa17.73■□□□□ 0.43
TRADD-201ENST00000345057 ZNF25P17030 456 aaPredicted RBP17.73■□□□□ 0.43
TRADD-201ENST00000345057 ATP6V0E2Q8NHE4 81 aa17.73■□□□□ 0.43
TRADD-201ENST00000345057 A0A0J9YXV3 536 aa17.72■□□□□ 0.43
TRADD-201ENST00000345057 TINCRA0A1B0GVN0 87 aa17.72■□□□□ 0.43
TRADD-201ENST00000345057 MPV17L2Q567V2 206 aa17.72■□□□□ 0.43
TRADD-201ENST00000345057 OR5A1Q8NGJ0 315 aa17.72■□□□□ 0.43
TRADD-201ENST00000345057 CELA1Q9UNI1 258 aa17.72■□□□□ 0.43
TRADD-201ENST00000345057 ANK2Q01484 3957 aa17.72■□□□□ 0.43
TRADD-201ENST00000345057 MYMXA0A1B0GTQ4 84 aa17.7■□□□□ 0.42
TRADD-201ENST00000345057 ZNF22P17026 224 aaPredicted RBP17.7■□□□□ 0.42
TRADD-201ENST00000345057 HSD52Q0P140 79 aa17.7■□□□□ 0.42
TRADD-201ENST00000345057 SEC11AP67812 179 aa17.69■□□□□ 0.42
TRADD-201ENST00000345057 TMEM223A0PJW6 202 aa17.69■□□□□ 0.42
TRADD-201ENST00000345057 RNASE13Q5GAN3 156 aaKnown RBP17.69■□□□□ 0.42
TRADD-201ENST00000345057 UBE2D1P51668 147 aa17.68■□□□□ 0.42
TRADD-201ENST00000345057 BVES-AS1Q5T3Y7 98 aa17.68■□□□□ 0.42
TRADD-201ENST00000345057 TTTY13Q9BZ97 58 aa17.68■□□□□ 0.42
TRADD-201ENST00000345057 C11orf68Q9H3H3 251 aaKnown RBP17.68■□□□□ 0.42
TRADD-201ENST00000345057 NBEAL2Q6ZNJ1 2754 aa17.67■□□□□ 0.42
TRADD-201ENST00000345057 CMYA5Q8N3K9 4069 aa17.67■□□□□ 0.42
TRADD-201ENST00000345057 CDC42SE2Q9NRR3 84 aa17.67■□□□□ 0.42
TRADD-201ENST00000345057 GEMIN7Q9H840 131 aaKnown RBP17.67■□□□□ 0.42
TRADD-201ENST00000345057 TIRAPP58753 221 aa17.66■□□□□ 0.42
TRADD-201ENST00000345057 MAPKAPK5-AS1Q8N8E1 139 aa17.66■□□□□ 0.42
TRADD-201ENST00000345057 TRAV26-1A0A087WT03 109 aa17.65■□□□□ 0.42
TRADD-201ENST00000345057 SH2D6Q7Z4S9 175 aa17.65■□□□□ 0.42
TRADD-201ENST00000345057 CHCHD5Q9BSY4 110 aa17.65■□□□□ 0.42
TRADD-201ENST00000345057 F5H768 121 aa17.65■□□□□ 0.42
TRADD-201ENST00000345057 LEPROTO15243 131 aa17.65■□□□□ 0.42
TRADD-201ENST00000345057 FAM19A3Q7Z5A8 133 aa17.65■□□□□ 0.42
TRADD-201ENST00000345057 ZNF815PA8K554 130 aa17.64■□□□□ 0.41
TRADD-201ENST00000345057 PLEKHB2Q96CS7 222 aa17.64■□□□□ 0.41
TRADD-201ENST00000345057 VSIG2Q96IQ7 327 aa17.64■□□□□ 0.41
TRADD-201ENST00000345057 LGALS3P17931 250 aaKnown RBP17.63■□□□□ 0.41
TRADD-201ENST00000345057 HERVK_113P63121 156 aa17.63■□□□□ 0.41
TRADD-201ENST00000345057 H3BRM9 83 aa17.63■□□□□ 0.41
TRADD-201ENST00000345057 RETNQ9HD89 108 aa17.63■□□□□ 0.41
TRADD-201ENST00000345057 J3QQQ9 107 aa17.62■□□□□ 0.41
TRADD-201ENST00000345057 TAL2Q16559 108 aa17.62■□□□□ 0.41
TRADD-201ENST00000345057 GAGE6Q13070 117 aa17.61■□□□□ 0.41
TRADD-201ENST00000345057 MRPL23Q16540 153 aaKnown RBP17.61■□□□□ 0.41
TRADD-201ENST00000345057 A0A0J9YY99 117 aa17.61■□□□□ 0.41
TRADD-201ENST00000345057 LINC00469Q8N7U9 141 aa17.61■□□□□ 0.41
TRADD-201ENST00000345057 PKD1L1Q8TDX9 2849 aa17.6■□□□□ 0.41
TRADD-201ENST00000345057 IGLV5-45A0A087WSX0 123 aa17.6■□□□□ 0.41
TRADD-201ENST00000345057 A0A1B0GV90 55 aa17.59■□□□□ 0.41
TRADD-201ENST00000345057 SCGB1D4Q6XE38 83 aa17.59■□□□□ 0.41
TRADD-201ENST00000345057 ORAOV1Q8WV07 137 aa17.59■□□□□ 0.41
TRADD-201ENST00000345057 HTN3P15516 51 aa17.58■□□□□ 0.41
TRADD-201ENST00000345057 C12orf74Q32Q52 190 aa17.58■□□□□ 0.41
TRADD-201ENST00000345057 ICOSQ9Y6W8 199 aa17.58■□□□□ 0.41
TRADD-201ENST00000345057 KPRPQ5T749 579 aaPredicted RBP17.58■□□□□ 0.4
TRADD-201ENST00000345057 IGHV1-58A0A0C4DH39 117 aa17.57■□□□□ 0.4
TRADD-201ENST00000345057 A6NDN8 102 aa17.56■□□□□ 0.4
TRADD-201ENST00000345057 LINC00242Q5T6M2 205 aa17.56■□□□□ 0.4
TRADD-201ENST00000345057 DNAH3Q8TD57 4116 aa17.56■□□□□ 0.4
TRADD-201ENST00000345057 TRAV13-1A0A0B4J241 112 aa17.56■□□□□ 0.4
TRADD-201ENST00000345057 A0A1B0GUV1 79 aa17.56■□□□□ 0.4
TRADD-201ENST00000345057 SPATA25Q9BR10 227 aa17.56■□□□□ 0.4
TRADD-201ENST00000345057 H3BNG1 76 aa17.55■□□□□ 0.4
TRADD-201ENST00000345057 IGHV3-30-3P0DP02 117 aa17.54■□□□□ 0.4
TRADD-201ENST00000345057 TSPEAR-AS2P59090 65 aa17.54■□□□□ 0.4
TRADD-201ENST00000345057 A0A096LPF7 62 aa17.54■□□□□ 0.4
TRADD-201ENST00000345057 HIST1H4GQ99525 98 aa17.53■□□□□ 0.4
TRADD-201ENST00000345057 CDKN2A-AS1Q9UH64 79 aa17.53■□□□□ 0.4
TRADD-201ENST00000345057 TMEM262E9PQX1 116 aa17.52■□□□□ 0.4
TRADD-201ENST00000345057 CEND1Q8N111 149 aa17.52■□□□□ 0.4
TRADD-201ENST00000345057 TM2D2Q9BX73 214 aa17.52■□□□□ 0.4
TRADD-201ENST00000345057 IGHV3-64A0A075B6Q5 118 aa17.52■□□□□ 0.39
TRADD-201ENST00000345057 GCSHP23434 173 aa17.52■□□□□ 0.39
TRADD-201ENST00000345057 IGLV4-60A0A075B6I1 120 aa17.5■□□□□ 0.39
TRADD-201ENST00000345057 K7EIL1 84 aa17.5■□□□□ 0.39
TRADD-201ENST00000345057 A0A0J9YWU9 116 aa17.5■□□□□ 0.39
TRADD-201ENST00000345057 SPINK8P0C7L1 97 aa17.5■□□□□ 0.39
TRADD-201ENST00000345057 COX6A2Q02221 97 aa17.49■□□□□ 0.39
TRADD-201ENST00000345057 TM2D3Q9BRN9 247 aa17.49■□□□□ 0.39
TRADD-201ENST00000345057 TRAV8-3A0A0A6YYJ7 113 aa17.48■□□□□ 0.39
TRADD-201ENST00000345057 RBX1P62877 108 aa17.48■□□□□ 0.39
TRADD-201ENST00000345057 PTTG1IPP53801 180 aa17.48■□□□□ 0.39
TRADD-201ENST00000345057 DEFB121Q5J5C9 76 aa17.48■□□□□ 0.39
TRADD-201ENST00000345057 LELP1Q5T871 98 aa17.48■□□□□ 0.39
TRADD-201ENST00000345057 C11orf45Q8TAV5 145 aa17.48■□□□□ 0.39
TRADD-201ENST00000345057 SPANXB1Q9NS25 103 aaPredicted RBP17.48■□□□□ 0.39
TRADD-201ENST00000345057 CCL25O15444 150 aa17.46■□□□□ 0.39
TRADD-201ENST00000345057 SRSF9Q13242 221 aaKnown RBP eCLIP17.46■□□□□ 0.39
TRADD-201ENST00000345057 Q6ZTC4 211 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms