RNA–Protein interactions for RNA: ENST00000342310.7

LMX1A-202, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,545 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-202ENST00000342310 CDKN2A-AS1Q9UH64 79 aa9.22□□□□□ -0.93
LMX1A-202ENST00000342310 C19orf54Q5BKX5 351 aa9.22□□□□□ -0.93
LMX1A-202ENST00000342310 CFAP126Q5VTH2 177 aa9.22□□□□□ -0.93
LMX1A-202ENST00000342310 OR13C6PQ8NH95 151 aa9.22□□□□□ -0.93
LMX1A-202ENST00000342310 BBC3Q96PG8 261 aaPredicted RBP9.22□□□□□ -0.93
LMX1A-202ENST00000342310 Q6ZTI0 123 aa9.21□□□□□ -0.93
LMX1A-202ENST00000342310 CHCHD5Q9BSY4 110 aa9.21□□□□□ -0.93
LMX1A-202ENST00000342310 TRGV4A0A0C4DH28 118 aa9.21□□□□□ -0.94
LMX1A-202ENST00000342310 H3BUA1 57 aa9.21□□□□□ -0.94
LMX1A-202ENST00000342310 DEFB4AO15263 64 aa9.21□□□□□ -0.94
LMX1A-202ENST00000342310 SHISA2Q6UWI4 295 aa9.21□□□□□ -0.94
LMX1A-202ENST00000342310 KIF25-AS1Q9Y6Z4 181 aa9.21□□□□□ -0.94
LMX1A-202ENST00000342310 PFN2P35080 140 aa9.21□□□□□ -0.94
LMX1A-202ENST00000342310 GAGE6Q13070 117 aa9.21□□□□□ -0.94
LMX1A-202ENST00000342310 C15orf53Q8NAA6 179 aa9.21□□□□□ -0.94
LMX1A-202ENST00000342310 Q9H8V8 135 aa9.21□□□□□ -0.94
LMX1A-202ENST00000342310 H3BMM0 161 aa9.2□□□□□ -0.94
LMX1A-202ENST00000342310 K7EMT4 169 aa9.2□□□□□ -0.94
LMX1A-202ENST00000342310 INSP01308 110 aa9.2□□□□□ -0.94
LMX1A-202ENST00000342310 TRBV27A0A0K0K1C4 114 aa9.19□□□□□ -0.94
LMX1A-202ENST00000342310 TIMM17AQ99595 171 aa9.19□□□□□ -0.94
LMX1A-202ENST00000342310 TRAV4A0A0B4J268 109 aa9.19□□□□□ -0.94
LMX1A-202ENST00000342310 ELANEP08246 267 aa9.19□□□□□ -0.94
LMX1A-202ENST00000342310 CARD19Q96LW7 228 aa9.19□□□□□ -0.94
LMX1A-202ENST00000342310 MGAM2Q2M2H8 2515 aa9.19□□□□□ -0.94
LMX1A-202ENST00000342310 SMIM20Q8N5G0 67 aa9.19□□□□□ -0.94
LMX1A-202ENST00000342310 A0A0J9YXY3 114 aa9.18□□□□□ -0.94
LMX1A-202ENST00000342310 IGHV3-30P01768 117 aa9.18□□□□□ -0.94
LMX1A-202ENST00000342310 IGHV3-30-5P0DP03 117 aa9.18□□□□□ -0.94
LMX1A-202ENST00000342310 FHL3Q13643 280 aa9.18□□□□□ -0.94
LMX1A-202ENST00000342310 SLC25A29Q8N8R3 303 aa9.18□□□□□ -0.94
LMX1A-202ENST00000342310 MAP6D1Q9H9H5 199 aa9.18□□□□□ -0.94
LMX1A-202ENST00000342310 NBPF19A0A087WUL8 3843 aa9.18□□□□□ -0.94
LMX1A-202ENST00000342310 CIRBPQ14011 172 aaKnown RBP9.18□□□□□ -0.94
LMX1A-202ENST00000342310 CITED2Q99967 270 aaPredicted RBP9.18□□□□□ -0.94
LMX1A-202ENST00000342310 ZNF702PQ9H963 129 aa9.18□□□□□ -0.94
LMX1A-202ENST00000342310 LOC100131303A0A0U1RQF7 123 aa9.18□□□□□ -0.94
LMX1A-202ENST00000342310 HIVEP1P15822 2718 aa9.17□□□□□ -0.94
LMX1A-202ENST00000342310 RBMY1BA6NDE4 496 aaKnown RBP9.17□□□□□ -0.94
LMX1A-202ENST00000342310 RBMY1EA6NEQ0 496 aaKnown RBP9.17□□□□□ -0.94
LMX1A-202ENST00000342310 RBMY1DP0C7P1 496 aaKnown RBP9.17□□□□□ -0.94
LMX1A-202ENST00000342310 LGALS9O00182 355 aa9.17□□□□□ -0.94
LMX1A-202ENST00000342310 RPL36AP83881 106 aaKnown RBP9.17□□□□□ -0.94
LMX1A-202ENST00000342310 ATXN8Q156A1 80 aa9.17□□□□□ -0.94
LMX1A-202ENST00000342310 ADAMTSL4-AS1Q5T5F5 129 aa9.17□□□□□ -0.94
LMX1A-202ENST00000342310 RPL36ALQ969Q0 106 aaKnown RBP9.17□□□□□ -0.94
LMX1A-202ENST00000342310 CDIP1Q9H305 208 aa9.17□□□□□ -0.94
LMX1A-202ENST00000342310 LEPROTO15243 131 aa9.17□□□□□ -0.94
LMX1A-202ENST00000342310 CRLF1O75462 422 aa9.17□□□□□ -0.94
LMX1A-202ENST00000342310 IGHV4-31P0DP07 118 aa9.17□□□□□ -0.94
LMX1A-202ENST00000342310 LINC00158P58513 81 aa9.16□□□□□ -0.94
LMX1A-202ENST00000342310 C5orf38Q86SI9 138 aa9.16□□□□□ -0.94
LMX1A-202ENST00000342310 C9orf85Q96MD7 179 aa9.16□□□□□ -0.94
LMX1A-202ENST00000342310 SPATA25Q9BR10 227 aa9.16□□□□□ -0.94
LMX1A-202ENST00000342310 PRO0461Q9UI25 63 aa9.16□□□□□ -0.94
LMX1A-202ENST00000342310 TMEM223A0PJW6 202 aa9.15□□□□□ -0.94
LMX1A-202ENST00000342310 CCL24O00175 119 aa9.15□□□□□ -0.94
LMX1A-202ENST00000342310 LINC01620Q4KN68 170 aa9.15□□□□□ -0.94
LMX1A-202ENST00000342310 UBE2WQ96B02 151 aa9.15□□□□□ -0.94
LMX1A-202ENST00000342310 POM121L12Q8N7R1 296 aa9.15□□□□□ -0.94
LMX1A-202ENST00000342310 NXPH4O95158 308 aa9.15□□□□□ -0.95
LMX1A-202ENST00000342310 HERV-K104P63124 156 aa9.15□□□□□ -0.95
LMX1A-202ENST00000342310 RHOHQ15669 191 aa9.15□□□□□ -0.95
LMX1A-202ENST00000342310 LINC00694P0DN24 101 aa9.14□□□□□ -0.95
LMX1A-202ENST00000342310 DSCR9P59020 149 aa9.14□□□□□ -0.95
LMX1A-202ENST00000342310 PF4P02776 101 aa9.14□□□□□ -0.95
LMX1A-202ENST00000342310 MED14OSP0DP75 135 aa9.14□□□□□ -0.95
LMX1A-202ENST00000342310 PIK3CD-AS1Q5SR53 167 aa9.14□□□□□ -0.95
LMX1A-202ENST00000342310 TRIAP1O43715 76 aa9.14□□□□□ -0.95
LMX1A-202ENST00000342310 EIF4EBP3O60516 100 aaPredicted RBP9.14□□□□□ -0.95
LMX1A-202ENST00000342310 CCDC179H3BU77 68 aa9.13□□□□□ -0.95
LMX1A-202ENST00000342310 SMR3AQ99954 134 aa9.13□□□□□ -0.95
LMX1A-202ENST00000342310 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.13□□□□□ -0.95
LMX1A-202ENST00000342310 IGHV3-33P01772 117 aa9.13□□□□□ -0.95
LMX1A-202ENST00000342310 DEFB113Q30KQ7 82 aa9.13□□□□□ -0.95
LMX1A-202ENST00000342310 Q6YL49 198 aa9.13□□□□□ -0.95
LMX1A-202ENST00000342310 IGLV10-54A0A075B6I4 117 aa9.13□□□□□ -0.95
LMX1A-202ENST00000342310 TRBV7-9A0A0J9YWB2 115 aa9.13□□□□□ -0.95
LMX1A-202ENST00000342310 UBE2D1P51668 147 aa9.13□□□□□ -0.95
LMX1A-202ENST00000342310 DEFB114Q30KQ6 69 aa9.12□□□□□ -0.95
LMX1A-202ENST00000342310 TMEM101Q96IK0 257 aa9.12□□□□□ -0.95
LMX1A-202ENST00000342310 COX6A2Q02221 97 aa9.12□□□□□ -0.95
LMX1A-202ENST00000342310 IFITM1P13164 125 aa9.11□□□□□ -0.95
LMX1A-202ENST00000342310 FAM19A4Q96LR4 140 aa9.11□□□□□ -0.95
LMX1A-202ENST00000342310 STAB1Q9NY15 2570 aa9.11□□□□□ -0.95
LMX1A-202ENST00000342310 PAX4O43316 350 aa9.11□□□□□ -0.95
LMX1A-202ENST00000342310 Q9HAA7 133 aa9.11□□□□□ -0.95
LMX1A-202ENST00000342310 IGHV1-58A0A0C4DH39 117 aa9.1□□□□□ -0.95
LMX1A-202ENST00000342310 LINC01546A6NGU7 62 aa9.1□□□□□ -0.95
LMX1A-202ENST00000342310 XCL1P47992 114 aa9.1□□□□□ -0.95
LMX1A-202ENST00000342310 GAGE2AQ6NT46 116 aa9.1□□□□□ -0.95
LMX1A-202ENST00000342310 SCGB1A1P11684 91 aa9.1□□□□□ -0.95
LMX1A-202ENST00000342310 ODF3L2Q3SX64 289 aa9.1□□□□□ -0.95
LMX1A-202ENST00000342310 ICOSQ9Y6W8 199 aa9.1□□□□□ -0.95
LMX1A-202ENST00000342310 DNAJC9-AS1A6NH13 148 aa9.1□□□□□ -0.95
LMX1A-202ENST00000342310 VWFP04275 2813 aa9.09□□□□□ -0.95
LMX1A-202ENST00000342310 VSIG2Q96IQ7 327 aa9.08□□□□□ -0.96
LMX1A-202ENST00000342310 TRBV6-5A0A0K0K1A5 114 aa9.08□□□□□ -0.96
LMX1A-202ENST00000342310 UBE2D4Q9Y2X8 147 aa9.08□□□□□ -0.96
LMX1A-202ENST00000342310 PDZD2O15018 2839 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms