RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 DNAJC30Q96LL9 226 aa5.22□□□□□ -1.57
SRFBP1-201ENST00000339397 CELA1Q9UNI1 258 aa5.22□□□□□ -1.57
SRFBP1-201ENST00000339397 DNAH3Q8TD57 4116 aa5.21□□□□□ -1.57
SRFBP1-201ENST00000339397 TRAV8-3A0A0A6YYJ7 113 aa5.21□□□□□ -1.58
SRFBP1-201ENST00000339397 E9PLD3 99 aa5.21□□□□□ -1.58
SRFBP1-201ENST00000339397 TAX1BP3O14907 124 aa5.21□□□□□ -1.58
SRFBP1-201ENST00000339397 AMELXQ99217 191 aa5.21□□□□□ -1.58
SRFBP1-201ENST00000339397 GHRHP01286 108 aa5.21□□□□□ -1.58
SRFBP1-201ENST00000339397 IGHV4-28A0A0C4DH34 117 aa5.2□□□□□ -1.58
SRFBP1-201ENST00000339397 ZNF22P17026 224 aaPredicted RBP5.2□□□□□ -1.58
SRFBP1-201ENST00000339397 GCSHP23434 173 aa5.2□□□□□ -1.58
SRFBP1-201ENST00000339397 PTTG1IPP53801 180 aa5.2□□□□□ -1.58
SRFBP1-201ENST00000339397 COX6A2Q02221 97 aa5.2□□□□□ -1.58
SRFBP1-201ENST00000339397 PYGO1Q9Y3Y4 419 aa5.2□□□□□ -1.58
SRFBP1-201ENST00000339397 MYMXA0A1B0GTQ4 84 aa5.2□□□□□ -1.58
SRFBP1-201ENST00000339397 ZNF815PA8K554 130 aa5.2□□□□□ -1.58
SRFBP1-201ENST00000339397 SIVA1O15304 175 aa5.2□□□□□ -1.58
SRFBP1-201ENST00000339397 PRB2P02812 416 aaPredicted RBP5.2□□□□□ -1.58
SRFBP1-201ENST00000339397 RAB37Q96AX2 223 aa5.2□□□□□ -1.58
SRFBP1-201ENST00000339397 RETNQ9HD89 108 aa5.2□□□□□ -1.58
SRFBP1-201ENST00000339397 COX11Q9Y6N1 276 aa5.2□□□□□ -1.58
SRFBP1-201ENST00000339397 A0A0J9YY99 117 aa5.19□□□□□ -1.58
SRFBP1-201ENST00000339397 TRBV10-1A0A0K0K1A3 114 aa5.19□□□□□ -1.58
SRFBP1-201ENST00000339397 G3V4G9 280 aa5.19□□□□□ -1.58
SRFBP1-201ENST00000339397 K7ERJ3 54 aa5.19□□□□□ -1.58
SRFBP1-201ENST00000339397 NFE4Q86UQ8 179 aa5.19□□□□□ -1.58
SRFBP1-201ENST00000339397 TRBV6-4A0A1B0GX49 114 aa5.19□□□□□ -1.58
SRFBP1-201ENST00000339397 LINC01549A6NIU2 74 aa5.19□□□□□ -1.58
SRFBP1-201ENST00000339397 WIPF1O43516 503 aa5.19□□□□□ -1.58
SRFBP1-201ENST00000339397 UBE2V1Q13404 147 aa5.19□□□□□ -1.58
SRFBP1-201ENST00000339397 TRAV13-1A0A0B4J241 112 aa5.18□□□□□ -1.58
SRFBP1-201ENST00000339397 TMEM223A0PJW6 202 aa5.18□□□□□ -1.58
SRFBP1-201ENST00000339397 CCL25O15444 150 aa5.18□□□□□ -1.58
SRFBP1-201ENST00000339397 GYPEP15421 78 aa5.18□□□□□ -1.58
SRFBP1-201ENST00000339397 MRPS36P82909 103 aaKnown RBP5.18□□□□□ -1.58
SRFBP1-201ENST00000339397 HSD52Q0P140 79 aa5.18□□□□□ -1.58
SRFBP1-201ENST00000339397 DGAT2L7PQ6IED9 249 aa5.18□□□□□ -1.58
SRFBP1-201ENST00000339397 DAZ4Q86SG3 579 aaKnown RBP5.18□□□□□ -1.58
SRFBP1-201ENST00000339397 SBSPONQ8IVN8 264 aa5.18□□□□□ -1.58
SRFBP1-201ENST00000339397 LINC00612Q8N6U2 182 aa5.18□□□□□ -1.58
SRFBP1-201ENST00000339397 Q8NAQ8 132 aa5.18□□□□□ -1.58
SRFBP1-201ENST00000339397 KIR2DL5BQ8NHK3 375 aa5.18□□□□□ -1.58
SRFBP1-201ENST00000339397 DAZ3Q9NR90 486 aaKnown RBP5.18□□□□□ -1.58
SRFBP1-201ENST00000339397 SPINK8P0C7L1 97 aa5.18□□□□□ -1.58
SRFBP1-201ENST00000339397 GAGE6Q13070 117 aa5.18□□□□□ -1.58
SRFBP1-201ENST00000339397 SPANXA1Q9NS26 97 aa5.18□□□□□ -1.58
SRFBP1-201ENST00000339397 CDKN2A-AS1Q9UH64 79 aa5.18□□□□□ -1.58
SRFBP1-201ENST00000339397 IGLV4-60A0A075B6I1 120 aa5.18□□□□□ -1.58
SRFBP1-201ENST00000339397 IGKV3OR2-268A0A0C4DH90 116 aa5.18□□□□□ -1.58
SRFBP1-201ENST00000339397 J3QQQ9 107 aa5.18□□□□□ -1.58
SRFBP1-201ENST00000339397 APOC4P55056 127 aa5.18□□□□□ -1.58
SRFBP1-201ENST00000339397 SCGB1D4Q6XE38 83 aa5.18□□□□□ -1.58
SRFBP1-201ENST00000339397 HIST1H4GQ99525 98 aa5.18□□□□□ -1.58
SRFBP1-201ENST00000339397 HIGD1BQ9P298 99 aa5.18□□□□□ -1.58
SRFBP1-201ENST00000339397 COL7A1Q02388 2944 aa5.17□□□□□ -1.58
SRFBP1-201ENST00000339397 HTN3P15516 51 aa5.17□□□□□ -1.58
SRFBP1-201ENST00000339397 UBE2D1P51668 147 aa5.17□□□□□ -1.58
SRFBP1-201ENST00000339397 CRYBA4P53673 196 aa5.17□□□□□ -1.58
SRFBP1-201ENST00000339397 CEND1Q8N111 149 aa5.17□□□□□ -1.58
SRFBP1-201ENST00000339397 LINC00528Q8N1L1 170 aa5.17□□□□□ -1.58
SRFBP1-201ENST00000339397 Q8N3U1 123 aa5.17□□□□□ -1.58
SRFBP1-201ENST00000339397 IGHV3-30-3P0DP02 117 aa5.17□□□□□ -1.58
SRFBP1-201ENST00000339397 PAPPA-AS1Q5QFB9 102 aa5.17□□□□□ -1.58
SRFBP1-201ENST00000339397 VSIG2Q96IQ7 327 aa5.17□□□□□ -1.58
SRFBP1-201ENST00000339397 CDC42SE2Q9NRR3 84 aa5.17□□□□□ -1.58
SRFBP1-201ENST00000339397 NHP2Q9NX24 153 aaKnown RBP5.17□□□□□ -1.58
SRFBP1-201ENST00000339397 SMIM9A6NGZ8 99 aa5.16□□□□□ -1.58
SRFBP1-201ENST00000339397 LINC00242Q5T6M2 205 aa5.16□□□□□ -1.58
SRFBP1-201ENST00000339397 AMMECR1LQ6DCA0 310 aa5.16□□□□□ -1.58
SRFBP1-201ENST00000339397 RNF183Q96D59 192 aa5.16□□□□□ -1.58
SRFBP1-201ENST00000339397 TRBV6-8A0A0A6YYG3 113 aa5.16□□□□□ -1.58
SRFBP1-201ENST00000339397 PCP4P48539 62 aa5.16□□□□□ -1.58
SRFBP1-201ENST00000339397 C10orf126Q8N4M7 172 aa5.16□□□□□ -1.58
SRFBP1-201ENST00000339397 TMEM243Q9BU79 118 aa5.16□□□□□ -1.58
SRFBP1-201ENST00000339397 H3BUT2 72 aa5.15□□□□□ -1.58
SRFBP1-201ENST00000339397 HERVK_113P61574 105 aa5.15□□□□□ -1.58
SRFBP1-201ENST00000339397 SEC11AP67812 179 aa5.15□□□□□ -1.58
SRFBP1-201ENST00000339397 VAMP3Q15836 100 aa5.15□□□□□ -1.58
SRFBP1-201ENST00000339397 CHCHD5Q9BSY4 110 aa5.15□□□□□ -1.58
SRFBP1-201ENST00000339397 TM2D2Q9BX73 214 aa5.15□□□□□ -1.58
SRFBP1-201ENST00000339397 TRAV26-1A0A087WT03 109 aa5.15□□□□□ -1.59
SRFBP1-201ENST00000339397 TINCRA0A1B0GVN0 87 aa5.15□□□□□ -1.59
SRFBP1-201ENST00000339397 UBE2L6O14933 153 aa5.15□□□□□ -1.59
SRFBP1-201ENST00000339397 PAX4O43316 350 aa5.15□□□□□ -1.59
SRFBP1-201ENST00000339397 DAD1P61803 113 aa5.15□□□□□ -1.59
SRFBP1-201ENST00000339397 LCE2DQ5TA82 110 aaPredicted RBP5.15□□□□□ -1.59
SRFBP1-201ENST00000339397 SHISA2Q6UWI4 295 aa5.15□□□□□ -1.59
SRFBP1-201ENST00000339397 GTSF1LQ9H1H1 148 aa5.15□□□□□ -1.59
SRFBP1-201ENST00000339397 GEMIN7Q9H840 131 aaKnown RBP5.15□□□□□ -1.59
SRFBP1-201ENST00000339397 PRO0255Q9UI72 69 aa5.15□□□□□ -1.59
SRFBP1-201ENST00000339397 F5H768 121 aa5.14□□□□□ -1.59
SRFBP1-201ENST00000339397 LGALS3P17931 250 aaKnown RBP5.14□□□□□ -1.59
SRFBP1-201ENST00000339397 SRSF9Q13242 221 aaKnown RBP eCLIP5.14□□□□□ -1.59
SRFBP1-201ENST00000339397 OR5A1Q8NGJ0 315 aa5.14□□□□□ -1.59
SRFBP1-201ENST00000339397 ATP6V0E2Q8NHE4 81 aa5.14□□□□□ -1.59
SRFBP1-201ENST00000339397 TIMM21Q9BVV7 248 aa5.14□□□□□ -1.59
SRFBP1-201ENST00000339397 LYRM9A8MSI8 78 aa5.14□□□□□ -1.59
SRFBP1-201ENST00000339397 LEPROTO15243 131 aa5.14□□□□□ -1.59
SRFBP1-201ENST00000339397 TNP2Q05952 138 aa5.14□□□□□ -1.59
SRFBP1-201ENST00000339397 EGFEM1PQ0D2K5 195 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms