RNA–Protein interactions for RNA: ENST00000337339.6

MSL3-202, Transcript of MSL complex subunit 3, humanhuman

TSL 2 BASIC

Gene MSL3, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-202ENST00000337339 KRTAP1-3Q8IUG1 177 aa7.04□□□□□ -1.28
MSL3-202ENST00000337339 C1orf158Q8N1D5 194 aa7.04□□□□□ -1.28
MSL3-202ENST00000337339 RPL36AP83881 106 aaKnown RBP7.03□□□□□ -1.28
MSL3-202ENST00000337339 RPL36ALQ969Q0 106 aaKnown RBP7.03□□□□□ -1.28
MSL3-202ENST00000337339 CDKN2A-AS1Q9UH64 79 aa7.03□□□□□ -1.28
MSL3-202ENST00000337339 ERG28Q9UKR5 140 aa7.03□□□□□ -1.28
MSL3-202ENST00000337339 TMEM238C9JI98 176 aa7.03□□□□□ -1.28
MSL3-202ENST00000337339 UBE2L6O14933 153 aa7.03□□□□□ -1.28
MSL3-202ENST00000337339 C10orf126Q8N4M7 172 aa7.03□□□□□ -1.28
MSL3-202ENST00000337339 TRGV4A0A0C4DH28 118 aa7.02□□□□□ -1.28
MSL3-202ENST00000337339 NFE4Q86UQ8 179 aa7.02□□□□□ -1.28
MSL3-202ENST00000337339 Q8N2B8 174 aa7.02□□□□□ -1.28
MSL3-202ENST00000337339 C11orf72Q8NBR9 251 aa7.02□□□□□ -1.29
MSL3-202ENST00000337339 TOMM7Q9P0U1 55 aa7.02□□□□□ -1.29
MSL3-202ENST00000337339 A0A0J9YXY3 114 aa7.02□□□□□ -1.29
MSL3-202ENST00000337339 TCL1BO95988 128 aa7.02□□□□□ -1.29
MSL3-202ENST00000337339 LOC100131303A0A0U1RQF7 123 aa7.01□□□□□ -1.29
MSL3-202ENST00000337339 UBE2D1P51668 147 aa7.01□□□□□ -1.29
MSL3-202ENST00000337339 LYRM7Q5U5X0 104 aa7.01□□□□□ -1.29
MSL3-202ENST00000337339 CHCHD7Q9BUK0 85 aa7.01□□□□□ -1.29
MSL3-202ENST00000337339 SPANXB1Q9NS25 103 aaPredicted RBP7.01□□□□□ -1.29
MSL3-202ENST00000337339 UBE2D4Q9Y2X8 147 aa7.01□□□□□ -1.29
MSL3-202ENST00000337339 C9JAW5 83 aa7.01□□□□□ -1.29
MSL3-202ENST00000337339 LINC00694P0DN24 101 aa7.01□□□□□ -1.29
MSL3-202ENST00000337339 C4orf48Q5BLP8 95 aa7.01□□□□□ -1.29
MSL3-202ENST00000337339 MEIG1Q5JSS6 88 aa7.01□□□□□ -1.29
MSL3-202ENST00000337339 A0A096LPF7 62 aa7□□□□□ -1.29
MSL3-202ENST00000337339 TEX29Q8N6K0 151 aa7□□□□□ -1.29
MSL3-202ENST00000337339 IGHV1-58A0A0C4DH39 117 aa6.99□□□□□ -1.29
MSL3-202ENST00000337339 ADAMTSL4-AS1Q5T5F5 129 aa6.99□□□□□ -1.29
MSL3-202ENST00000337339 SPANXA1Q9NS26 97 aa6.99□□□□□ -1.29
MSL3-202ENST00000337339 J3QKU1 62 aa6.99□□□□□ -1.29
MSL3-202ENST00000337339 GAGE6Q13070 117 aa6.99□□□□□ -1.29
MSL3-202ENST00000337339 AMELXQ99217 191 aa6.99□□□□□ -1.29
MSL3-202ENST00000337339 CHCHD5Q9BSY4 110 aa6.99□□□□□ -1.29
MSL3-202ENST00000337339 GAGE12HA6NDE8 117 aa6.99□□□□□ -1.29
MSL3-202ENST00000337339 COX6A2Q02221 97 aa6.99□□□□□ -1.29
MSL3-202ENST00000337339 TMEM86BQ8N661 226 aa6.99□□□□□ -1.29
MSL3-202ENST00000337339 Q9H8V8 135 aa6.99□□□□□ -1.29
MSL3-202ENST00000337339 TMEM262E9PQX1 116 aa6.98□□□□□ -1.29
MSL3-202ENST00000337339 K7EQD1 137 aa6.98□□□□□ -1.29
MSL3-202ENST00000337339 RS1O15537 224 aa6.98□□□□□ -1.29
MSL3-202ENST00000337339 MRPS36P82909 103 aaKnown RBP6.98□□□□□ -1.29
MSL3-202ENST00000337339 DEFB4AO15263 64 aa6.98□□□□□ -1.29
MSL3-202ENST00000337339 VSIG2Q96IQ7 327 aa6.98□□□□□ -1.29
MSL3-202ENST00000337339 PYGO1Q9Y3Y4 419 aa6.98□□□□□ -1.29
MSL3-202ENST00000337339 PRIMA1Q86XR5 153 aa6.98□□□□□ -1.29
MSL3-202ENST00000337339 TMEM263Q8WUH6 116 aaKnown RBP6.98□□□□□ -1.29
MSL3-202ENST00000337339 SIGMAR1Q99720 223 aa6.98□□□□□ -1.29
MSL3-202ENST00000337339 C11orf68Q9H3H3 251 aaKnown RBP6.98□□□□□ -1.29
MSL3-202ENST00000337339 CIRBPQ14011 172 aaKnown RBP6.97□□□□□ -1.29
MSL3-202ENST00000337339 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.97□□□□□ -1.29
MSL3-202ENST00000337339 TMEM101Q96IK0 257 aa6.97□□□□□ -1.29
MSL3-202ENST00000337339 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.97□□□□□ -1.29
MSL3-202ENST00000337339 TRAV25A0A0B4J276 109 aa6.97□□□□□ -1.29
MSL3-202ENST00000337339 FAM104AQ969W3 186 aa6.97□□□□□ -1.29
MSL3-202ENST00000337339 DNAJC30Q96LL9 226 aa6.97□□□□□ -1.29
MSL3-202ENST00000337339 TINCRA0A1B0GVN0 87 aa6.96□□□□□ -1.3
MSL3-202ENST00000337339 IGHV3-33P01772 117 aa6.96□□□□□ -1.3
MSL3-202ENST00000337339 VWFP04275 2813 aa6.96□□□□□ -1.3
MSL3-202ENST00000337339 SMCPP49901 116 aaPredicted RBP6.96□□□□□ -1.3
MSL3-202ENST00000337339 CLPSL2Q6UWE3 100 aa6.96□□□□□ -1.3
MSL3-202ENST00000337339 SLC25A20O43772 301 aa6.95□□□□□ -1.3
MSL3-202ENST00000337339 FOXI1Q12951 378 aa6.95□□□□□ -1.3
MSL3-202ENST00000337339 BEAN1Q3B7T3 259 aa6.95□□□□□ -1.3
MSL3-202ENST00000337339 EIF4EBP3O60516 100 aaPredicted RBP6.95□□□□□ -1.3
MSL3-202ENST00000337339 FHL3Q13643 280 aa6.95□□□□□ -1.3
MSL3-202ENST00000337339 NTM-AS1Q6ZSK4 140 aa6.95□□□□□ -1.3
MSL3-202ENST00000337339 TMEM243Q9BU79 118 aa6.95□□□□□ -1.3
MSL3-202ENST00000337339 PRO0461Q9UI25 63 aa6.95□□□□□ -1.3
MSL3-202ENST00000337339 TRBV20-1A0A075B6N2 111 aa6.95□□□□□ -1.3
MSL3-202ENST00000337339 COX6CP09669 75 aa6.95□□□□□ -1.3
MSL3-202ENST00000337339 LINC00482Q8N8I6 264 aa6.95□□□□□ -1.3
MSL3-202ENST00000337339 AKAP9Q99996 3911 aa6.94□□□□□ -1.3
MSL3-202ENST00000337339 UBE2D3P61077 147 aa6.94□□□□□ -1.3
MSL3-202ENST00000337339 UBE2D2P62837 147 aa6.94□□□□□ -1.3
MSL3-202ENST00000337339 LINC00242Q5T6M2 205 aa6.94□□□□□ -1.3
MSL3-202ENST00000337339 CLEC2BQ92478 149 aa6.94□□□□□ -1.3
MSL3-202ENST00000337339 CIDEAO60543 219 aa6.94□□□□□ -1.3
MSL3-202ENST00000337339 RPL13AP40429 203 aaKnown RBP6.94□□□□□ -1.3
MSL3-202ENST00000337339 ANKRD29Q8N6D5 301 aa6.94□□□□□ -1.3
MSL3-202ENST00000337339 C1QTNF4Q9BXJ3 329 aa6.94□□□□□ -1.3
MSL3-202ENST00000337339 CRLF1O75462 422 aa6.94□□□□□ -1.3
MSL3-202ENST00000337339 RNASE1P07998 156 aaKnown RBP6.94□□□□□ -1.3
MSL3-202ENST00000337339 HERVK_113P63121 156 aa6.94□□□□□ -1.3
MSL3-202ENST00000337339 TEP1Q99973 2627 aaKnown RBP6.93□□□□□ -1.3
MSL3-202ENST00000337339 TRAV4A0A0B4J268 109 aa6.93□□□□□ -1.3
MSL3-202ENST00000337339 A8MTW9 85 aa6.93□□□□□ -1.3
MSL3-202ENST00000337339 TRIAP1O43715 76 aa6.93□□□□□ -1.3
MSL3-202ENST00000337339 HTN3P15516 51 aa6.93□□□□□ -1.3
MSL3-202ENST00000337339 DAZ2Q13117 558 aaKnown RBP6.93□□□□□ -1.3
MSL3-202ENST00000337339 DAZ4Q86SG3 579 aaKnown RBP6.93□□□□□ -1.3
MSL3-202ENST00000337339 DAZ3Q9NR90 486 aaKnown RBP6.93□□□□□ -1.3
MSL3-202ENST00000337339 C5orf38Q86SI9 138 aa6.93□□□□□ -1.3
MSL3-202ENST00000337339 NTN5Q8WTR8 489 aaPredicted RBP6.93□□□□□ -1.3
MSL3-202ENST00000337339 PDZD2O15018 2839 aa6.93□□□□□ -1.3
MSL3-202ENST00000337339 C16orf74Q96GX8 76 aa6.92□□□□□ -1.3
MSL3-202ENST00000337339 IGLV1-51P01701 117 aa6.92□□□□□ -1.3
MSL3-202ENST00000337339 GIG44P09565 113 aaPredicted RBP6.92□□□□□ -1.3
MSL3-202ENST00000337339 MIAQ16674 131 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms