RNA–Protein interactions for RNA: ENST00000336294.9

TMEM39B-201, Transcript of transmembrane protein 39B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM39B, Length 1,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39B-201ENST00000336294 IGHV3-30-5P0DP03 117 aa11.93□□□□□ -0.5
TMEM39B-201ENST00000336294 RPL24P83731 157 aaKnown RBP11.93□□□□□ -0.5
TMEM39B-201ENST00000336294 DAZ4Q86SG3 579 aaKnown RBP11.93□□□□□ -0.5
TMEM39B-201ENST00000336294 TIMM21Q9BVV7 248 aa11.93□□□□□ -0.5
TMEM39B-201ENST00000336294 DAZ3Q9NR90 486 aaKnown RBP11.93□□□□□ -0.5
TMEM39B-201ENST00000336294 PRO0461Q9UI25 63 aa11.93□□□□□ -0.5
TMEM39B-201ENST00000336294 TRGV2A0A075B6R0 118 aa11.92□□□□□ -0.5
TMEM39B-201ENST00000336294 INSL3P51460 131 aa11.92□□□□□ -0.5
TMEM39B-201ENST00000336294 Q6ZUT4 128 aa11.92□□□□□ -0.5
TMEM39B-201ENST00000336294 TINCRA0A1B0GVN0 87 aa11.91□□□□□ -0.5
TMEM39B-201ENST00000336294 H3BMG7 143 aa11.91□□□□□ -0.5
TMEM39B-201ENST00000336294 GAGE7O76087 117 aa11.91□□□□□ -0.5
TMEM39B-201ENST00000336294 GAGE12FP0CL80 117 aa11.91□□□□□ -0.5
TMEM39B-201ENST00000336294 GAGE12GP0CL81 117 aa11.91□□□□□ -0.5
TMEM39B-201ENST00000336294 GAGE12IP0CL82 117 aa11.91□□□□□ -0.5
TMEM39B-201ENST00000336294 UBE2D3P61077 147 aa11.91□□□□□ -0.5
TMEM39B-201ENST00000336294 UBE2D2P62837 147 aa11.91□□□□□ -0.5
TMEM39B-201ENST00000336294 RNASE13Q5GAN3 156 aaKnown RBP11.91□□□□□ -0.5
TMEM39B-201ENST00000336294 TSPAN13O95857 204 aa11.9□□□□□ -0.5
TMEM39B-201ENST00000336294 C9orf66Q5T8R8 295 aa11.9□□□□□ -0.5
TMEM39B-201ENST00000336294 DGAT2L7PQ6IED9 249 aa11.9□□□□□ -0.5
TMEM39B-201ENST00000336294 ATP6V0E2Q8NHE4 81 aa11.9□□□□□ -0.5
TMEM39B-201ENST00000336294 IGHV3-64A0A075B6Q5 118 aa11.89□□□□□ -0.51
TMEM39B-201ENST00000336294 WFDC2Q14508 124 aa11.89□□□□□ -0.51
TMEM39B-201ENST00000336294 HIVEP1P15822 2718 aa11.89□□□□□ -0.51
TMEM39B-201ENST00000336294 GAGE12JA6NER3 117 aa11.88□□□□□ -0.51
TMEM39B-201ENST00000336294 GAGE4Q13068 117 aa11.88□□□□□ -0.51
TMEM39B-201ENST00000336294 GAGE5Q13069 117 aa11.88□□□□□ -0.51
TMEM39B-201ENST00000336294 TRBV20-1A0A075B6N2 111 aa11.88□□□□□ -0.51
TMEM39B-201ENST00000336294 TMEM238C9JI98 176 aa11.88□□□□□ -0.51
TMEM39B-201ENST00000336294 SMAGPQ0VAQ4 97 aa11.88□□□□□ -0.51
TMEM39B-201ENST00000336294 SETD2Q9BYW2 2564 aaPredicted RBP11.88□□□□□ -0.51
TMEM39B-201ENST00000336294 TRBV6-4A0A1B0GX49 114 aa11.87□□□□□ -0.51
TMEM39B-201ENST00000336294 IGHV3-30-3P0DP02 117 aa11.87□□□□□ -0.51
TMEM39B-201ENST00000336294 C10orf126Q8N4M7 172 aa11.87□□□□□ -0.51
TMEM39B-201ENST00000336294 CRLF1O75462 422 aa11.86□□□□□ -0.51
TMEM39B-201ENST00000336294 APOMO95445 188 aa11.86□□□□□ -0.51
TMEM39B-201ENST00000336294 GEMIN7Q9H840 131 aaKnown RBP11.86□□□□□ -0.51
TMEM39B-201ENST00000336294 TRGV4A0A0C4DH28 118 aa11.86□□□□□ -0.51
TMEM39B-201ENST00000336294 IGHV1-58A0A0C4DH39 117 aa11.86□□□□□ -0.51
TMEM39B-201ENST00000336294 CFC1BP0CG36 223 aa11.86□□□□□ -0.51
TMEM39B-201ENST00000336294 CFC1P0CG37 223 aa11.86□□□□□ -0.51
TMEM39B-201ENST00000336294 NTM-AS1Q6ZSK4 140 aa11.86□□□□□ -0.51
TMEM39B-201ENST00000336294 CSDC2Q9Y534 153 aaKnown RBP11.86□□□□□ -0.51
TMEM39B-201ENST00000336294 A0A0B4J2C4 111 aa11.85□□□□□ -0.51
TMEM39B-201ENST00000336294 SBSPONQ8IVN8 264 aa11.85□□□□□ -0.51
TMEM39B-201ENST00000336294 GTSF1LQ9H1H1 148 aa11.85□□□□□ -0.51
TMEM39B-201ENST00000336294 PRO1854Q9UHT4 67 aa11.85□□□□□ -0.51
TMEM39B-201ENST00000336294 TIRAPP58753 221 aa11.84□□□□□ -0.51
TMEM39B-201ENST00000336294 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.83□□□□□ -0.51
TMEM39B-201ENST00000336294 LINC00694P0DN24 101 aa11.83□□□□□ -0.51
TMEM39B-201ENST00000336294 ETDBQ3ZM63 59 aa11.83□□□□□ -0.51
TMEM39B-201ENST00000336294 VSIG2Q96IQ7 327 aa11.83□□□□□ -0.51
TMEM39B-201ENST00000336294 TRAV8-3A0A0A6YYJ7 113 aa11.83□□□□□ -0.52
TMEM39B-201ENST00000336294 LOC107984156A0A0G2JMH3 177 aa11.83□□□□□ -0.52
TMEM39B-201ENST00000336294 ARL17AQ8IVW1 177 aa11.83□□□□□ -0.52
TMEM39B-201ENST00000336294 NSD1Q96L73 2696 aaPredicted RBP11.82□□□□□ -0.52
TMEM39B-201ENST00000336294 IGLV5-45A0A087WSX0 123 aa11.82□□□□□ -0.52
TMEM39B-201ENST00000336294 SCGB1A1P11684 91 aa11.82□□□□□ -0.52
TMEM39B-201ENST00000336294 FHL2Q14192 279 aa11.82□□□□□ -0.52
TMEM39B-201ENST00000336294 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.82□□□□□ -0.52
TMEM39B-201ENST00000336294 KIR2DL5BQ8NHK3 375 aa11.82□□□□□ -0.52
TMEM39B-201ENST00000336294 SPATA3Q8NHX4 192 aa11.82□□□□□ -0.52
TMEM39B-201ENST00000336294 CITED1Q99966 193 aa11.82□□□□□ -0.52
TMEM39B-201ENST00000336294 SPATA25Q9BR10 227 aa11.82□□□□□ -0.52
TMEM39B-201ENST00000336294 TMEM243Q9BU79 118 aa11.82□□□□□ -0.52
TMEM39B-201ENST00000336294 A0A0J9YXY3 114 aa11.81□□□□□ -0.52
TMEM39B-201ENST00000336294 LOC100131303A0A0U1RQF7 123 aa11.81□□□□□ -0.52
TMEM39B-201ENST00000336294 SMIM9A6NGZ8 99 aa11.81□□□□□ -0.52
TMEM39B-201ENST00000336294 UBE2L6O14933 153 aa11.81□□□□□ -0.52
TMEM39B-201ENST00000336294 SPINK8P0C7L1 97 aa11.81□□□□□ -0.52
TMEM39B-201ENST00000336294 PSMB2P49721 201 aa11.81□□□□□ -0.52
TMEM39B-201ENST00000336294 HERVK_113P63121 156 aa11.81□□□□□ -0.52
TMEM39B-201ENST00000336294 SH2D6Q7Z4S9 175 aa11.81□□□□□ -0.52
TMEM39B-201ENST00000336294 FAM19A3Q7Z5A8 133 aa11.81□□□□□ -0.52
TMEM39B-201ENST00000336294 A4D1N5 150 aa11.8□□□□□ -0.52
TMEM39B-201ENST00000336294 H7C423 109 aa11.8□□□□□ -0.52
TMEM39B-201ENST00000336294 M0QXV9 152 aa11.8□□□□□ -0.52
TMEM39B-201ENST00000336294 LINC00612Q8N6U2 182 aa11.8□□□□□ -0.52
TMEM39B-201ENST00000336294 CDKN2A-AS1Q9UH64 79 aa11.8□□□□□ -0.52
TMEM39B-201ENST00000336294 NDUFA12Q9UI09 145 aa11.8□□□□□ -0.52
TMEM39B-201ENST00000336294 TMEM101Q96IK0 257 aa11.79□□□□□ -0.52
TMEM39B-201ENST00000336294 SPANXDQ9BXN6 97 aa11.79□□□□□ -0.52
TMEM39B-201ENST00000336294 CDC42SE2Q9NRR3 84 aa11.79□□□□□ -0.52
TMEM39B-201ENST00000336294 SPANXCQ9NY87 97 aa11.79□□□□□ -0.52
TMEM39B-201ENST00000336294 GAGE12HA6NDE8 117 aa11.79□□□□□ -0.52
TMEM39B-201ENST00000336294 LINC00242Q5T6M2 205 aa11.79□□□□□ -0.52
TMEM39B-201ENST00000336294 X6R8D5 127 aa11.79□□□□□ -0.52
TMEM39B-201ENST00000336294 JMJD1CQ15652 2540 aa11.78□□□□□ -0.52
TMEM39B-201ENST00000336294 FN1P02751 2386 aaKnown RBP11.78□□□□□ -0.52
TMEM39B-201ENST00000336294 IGHV3-33P01772 117 aa11.78□□□□□ -0.52
TMEM39B-201ENST00000336294 DEFB130BP0DP73 79 aa11.78□□□□□ -0.52
TMEM39B-201ENST00000336294 DEFB130AP0DP74 79 aa11.78□□□□□ -0.52
TMEM39B-201ENST00000336294 SMCPP49901 116 aaPredicted RBP11.78□□□□□ -0.52
TMEM39B-201ENST00000336294 ZFAND6Q6FIF0 208 aa11.78□□□□□ -0.52
TMEM39B-201ENST00000336294 SIGMAR1Q99720 223 aa11.78□□□□□ -0.52
TMEM39B-201ENST00000336294 NIPBLQ6KC79 2804 aaeCLIP11.77□□□□□ -0.52
TMEM39B-201ENST00000336294 TIMM17BO60830 172 aa11.77□□□□□ -0.52
TMEM39B-201ENST00000336294 TCL1BO95988 128 aa11.77□□□□□ -0.52
TMEM39B-201ENST00000336294 COX6A2Q02221 97 aa11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms