RNA–Protein interactions for RNA: ENST00000335005.10

ITM2C-203, Transcript of integral membrane protein 2C, humanhuman

TSL 1 (best) BASIC

Gene ITM2C, Length 1,889 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2C-203ENST00000335005 SBSPONQ8IVN8 264 aa16.73■□□□□ 0.27
ITM2C-203ENST00000335005 TRAV8-3A0A0A6YYJ7 113 aa16.72■□□□□ 0.27
ITM2C-203ENST00000335005 RPL35AP18077 110 aaKnown RBP16.72■□□□□ 0.27
ITM2C-203ENST00000335005 LYRM7Q5U5X0 104 aa16.72■□□□□ 0.27
ITM2C-203ENST00000335005 LITAFQ99732 161 aa16.72■□□□□ 0.27
ITM2C-203ENST00000335005 RPL24P83731 157 aaKnown RBP16.71■□□□□ 0.27
ITM2C-203ENST00000335005 GEMIN7Q9H840 131 aaKnown RBP16.71■□□□□ 0.27
ITM2C-203ENST00000335005 VPS25Q9BRG1 176 aa16.71■□□□□ 0.27
ITM2C-203ENST00000335005 A0A0B4J2C4 111 aa16.7■□□□□ 0.26
ITM2C-203ENST00000335005 KRTAP10-3P60369 221 aa16.7■□□□□ 0.26
ITM2C-203ENST00000335005 DGAT2L7PQ6IED9 249 aa16.7■□□□□ 0.26
ITM2C-203ENST00000335005 NTM-AS1Q6ZSK4 140 aa16.7■□□□□ 0.26
ITM2C-203ENST00000335005 PRO1854Q9UHT4 67 aa16.7■□□□□ 0.26
ITM2C-203ENST00000335005 SETXQ7Z333 2677 aaKnown RBP16.7■□□□□ 0.26
ITM2C-203ENST00000335005 A4D1N5 150 aa16.69■□□□□ 0.26
ITM2C-203ENST00000335005 GAGE13Q4V321 117 aa16.69■□□□□ 0.26
ITM2C-203ENST00000335005 ZFAND6Q6FIF0 208 aa16.69■□□□□ 0.26
ITM2C-203ENST00000335005 SMR3AQ99954 134 aa16.69■□□□□ 0.26
ITM2C-203ENST00000335005 GTSF1LQ9H1H1 148 aa16.69■□□□□ 0.26
ITM2C-203ENST00000335005 NDUFA12Q9UI09 145 aa16.69■□□□□ 0.26
ITM2C-203ENST00000335005 SMAGPQ0VAQ4 97 aa16.69■□□□□ 0.26
ITM2C-203ENST00000335005 SPANXDQ9BXN6 97 aa16.69■□□□□ 0.26
ITM2C-203ENST00000335005 SPANXCQ9NY87 97 aa16.69■□□□□ 0.26
ITM2C-203ENST00000335005 SETD2Q9BYW2 2564 aaPredicted RBP16.68■□□□□ 0.26
ITM2C-203ENST00000335005 SPINK8P0C7L1 97 aa16.68■□□□□ 0.26
ITM2C-203ENST00000335005 WFDC2Q14508 124 aa16.68■□□□□ 0.26
ITM2C-203ENST00000335005 MUSTN1Q8IVN3 82 aa16.68■□□□□ 0.26
ITM2C-203ENST00000335005 LINC00482Q8N8I6 264 aa16.68■□□□□ 0.26
ITM2C-203ENST00000335005 LINC00694P0DN24 101 aa16.67■□□□□ 0.26
ITM2C-203ENST00000335005 HIVEP2P31629 2446 aa16.67■□□□□ 0.26
ITM2C-203ENST00000335005 TRBV6-4A0A1B0GX49 114 aa16.67■□□□□ 0.26
ITM2C-203ENST00000335005 EIF4EBP3O60516 100 aaPredicted RBP16.67■□□□□ 0.26
ITM2C-203ENST00000335005 LY6G6DO95868 133 aa16.67■□□□□ 0.26
ITM2C-203ENST00000335005 HERVK_113P63121 156 aa16.67■□□□□ 0.26
ITM2C-203ENST00000335005 CDKN2A-AS1Q9UH64 79 aa16.67■□□□□ 0.26
ITM2C-203ENST00000335005 TRAV16A0A0A6YYK6 109 aaPredicted RBP16.66■□□□□ 0.26
ITM2C-203ENST00000335005 TEX48A0A1B0GUV7 120 aa16.66■□□□□ 0.26
ITM2C-203ENST00000335005 JMJD1CQ15652 2540 aa16.65■□□□□ 0.26
ITM2C-203ENST00000335005 GAGE12JA6NER3 117 aa16.65■□□□□ 0.26
ITM2C-203ENST00000335005 GAGE4Q13068 117 aa16.65■□□□□ 0.26
ITM2C-203ENST00000335005 GAGE5Q13069 117 aa16.65■□□□□ 0.26
ITM2C-203ENST00000335005 TIMM17BO60830 172 aa16.65■□□□□ 0.26
ITM2C-203ENST00000335005 GAGE7O76087 117 aa16.65■□□□□ 0.26
ITM2C-203ENST00000335005 GAGE12FP0CL80 117 aa16.65■□□□□ 0.26
ITM2C-203ENST00000335005 GAGE12GP0CL81 117 aa16.65■□□□□ 0.26
ITM2C-203ENST00000335005 GAGE12IP0CL82 117 aa16.65■□□□□ 0.26
ITM2C-203ENST00000335005 TRGV2A0A075B6R0 118 aa16.64■□□□□ 0.25
ITM2C-203ENST00000335005 IGLV5-39A0A0G2JS06 123 aa16.64■□□□□ 0.25
ITM2C-203ENST00000335005 IGHV3-33P01772 117 aa16.64■□□□□ 0.25
ITM2C-203ENST00000335005 LINC00242Q5T6M2 205 aa16.64■□□□□ 0.25
ITM2C-203ENST00000335005 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.64■□□□□ 0.25
ITM2C-203ENST00000335005 TRBV20-1A0A075B6N2 111 aa16.63■□□□□ 0.25
ITM2C-203ENST00000335005 LOC107984156A0A0G2JMH3 177 aa16.63■□□□□ 0.25
ITM2C-203ENST00000335005 PF4P02776 101 aa16.63■□□□□ 0.25
ITM2C-203ENST00000335005 ARL17AQ8IVW1 177 aa16.63■□□□□ 0.25
ITM2C-203ENST00000335005 H7C423 109 aa16.63■□□□□ 0.25
ITM2C-203ENST00000335005 CDC42SE2Q9NRR3 84 aa16.63■□□□□ 0.25
ITM2C-203ENST00000335005 NDUFA1O15239 70 aa16.62■□□□□ 0.25
ITM2C-203ENST00000335005 COX6A2Q02221 97 aa16.62■□□□□ 0.25
ITM2C-203ENST00000335005 RNF183Q96D59 192 aa16.62■□□□□ 0.25
ITM2C-203ENST00000335005 TMEM101Q96IK0 257 aa16.62■□□□□ 0.25
ITM2C-203ENST00000335005 FASNP49327 2511 aaKnown RBP16.62■□□□□ 0.25
ITM2C-203ENST00000335005 NOTCH3Q9UM47 2321 aa16.61■□□□□ 0.25
ITM2C-203ENST00000335005 MIAQ16674 131 aa16.61■□□□□ 0.25
ITM2C-203ENST00000335005 TMEM243Q9BU79 118 aa16.61■□□□□ 0.25
ITM2C-203ENST00000335005 A8MZ25 164 aa16.6■□□□□ 0.25
ITM2C-203ENST00000335005 ADAMTSL4-AS1Q5T5F5 129 aa16.6■□□□□ 0.25
ITM2C-203ENST00000335005 PSMB2P49721 201 aa16.59■□□□□ 0.25
ITM2C-203ENST00000335005 PCP4P48539 62 aa16.59■□□□□ 0.25
ITM2C-203ENST00000335005 FHL2Q14192 279 aa16.59■□□□□ 0.25
ITM2C-203ENST00000335005 TCL1BO95988 128 aa16.58■□□□□ 0.24
ITM2C-203ENST00000335005 ETDBQ3ZM63 59 aa16.58■□□□□ 0.24
ITM2C-203ENST00000335005 LINC00612Q8N6U2 182 aa16.58■□□□□ 0.24
ITM2C-203ENST00000335005 KIR2DL5BQ8NHK3 375 aa16.58■□□□□ 0.24
ITM2C-203ENST00000335005 ERG28Q9UKR5 140 aa16.58■□□□□ 0.24
ITM2C-203ENST00000335005 TRGV4A0A0C4DH28 118 aa16.57■□□□□ 0.24
ITM2C-203ENST00000335005 INSL3P51460 131 aa16.57■□□□□ 0.24
ITM2C-203ENST00000335005 IFITM1P13164 125 aa16.56■□□□□ 0.24
ITM2C-203ENST00000335005 SMCPP49901 116 aaPredicted RBP16.56■□□□□ 0.24
ITM2C-203ENST00000335005 SFTA2Q6UW10 78 aa16.56■□□□□ 0.24
ITM2C-203ENST00000335005 SH2D6Q7Z4S9 175 aa16.56■□□□□ 0.24
ITM2C-203ENST00000335005 ATP6V0E2Q8NHE4 81 aa16.56■□□□□ 0.24
ITM2C-203ENST00000335005 LOC100131303A0A0U1RQF7 123 aa16.56■□□□□ 0.24
ITM2C-203ENST00000335005 MTURNQ8N3F0 131 aa16.56■□□□□ 0.24
ITM2C-203ENST00000335005 SMIM1B2RUZ4 78 aa16.55■□□□□ 0.24
ITM2C-203ENST00000335005 UBE2L6O14933 153 aa16.55■□□□□ 0.24
ITM2C-203ENST00000335005 J3QR89 54 aa16.54■□□□□ 0.24
ITM2C-203ENST00000335005 F5H768 121 aa16.54■□□□□ 0.24
ITM2C-203ENST00000335005 TRAV13-1A0A0B4J241 112 aa16.52■□□□□ 0.24
ITM2C-203ENST00000335005 PRSS2P07478 247 aa16.52■□□□□ 0.24
ITM2C-203ENST00000335005 NIPBLQ6KC79 2804 aaeCLIP16.52■□□□□ 0.241e-5■■■■□ 22.3
ITM2C-203ENST00000335005 SCGB1C2P0DMR2 95 aa16.51■□□□□ 0.23
ITM2C-203ENST00000335005 C9orf66Q5T8R8 295 aa16.51■□□□□ 0.23
ITM2C-203ENST00000335005 TRBV30A0A0K0K1B3 111 aa16.5■□□□□ 0.23
ITM2C-203ENST00000335005 SMIM9A6NGZ8 99 aa16.5■□□□□ 0.23
ITM2C-203ENST00000335005 CRLF1O75462 422 aa16.5■□□□□ 0.23
ITM2C-203ENST00000335005 TRBV6-8A0A0A6YYG3 113 aa16.5■□□□□ 0.23
ITM2C-203ENST00000335005 INAFM1C9JVW0 142 aa16.49■□□□□ 0.23
ITM2C-203ENST00000335005 CIRBPQ14011 172 aaKnown RBP16.49■□□□□ 0.23
ITM2C-203ENST00000335005 Q9H8V8 135 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 108.5 ms