RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 TTC32Q5I0X7 151 aa9.19□□□□□ -0.94
DDX39A-202ENST00000324340 PIK3CD-AS1Q5SR53 167 aa9.19□□□□□ -0.94
DDX39A-202ENST00000324340 IL17DQ8TAD2 202 aa9.19□□□□□ -0.94
DDX39A-202ENST00000324340 TMEM263Q8WUH6 116 aaKnown RBP9.19□□□□□ -0.94
DDX39A-202ENST00000324340 MUC4Q99102 2169 aa9.18□□□□□ -0.94
DDX39A-202ENST00000324340 IGHV3OR16-12A0A075B7B8 117 aa9.18□□□□□ -0.94
DDX39A-202ENST00000324340 M0R381 172 aa9.18□□□□□ -0.94
DDX39A-202ENST00000324340 SPRY2O43597 315 aa9.18□□□□□ -0.94
DDX39A-202ENST00000324340 HERVK_113P61574 105 aa9.18□□□□□ -0.94
DDX39A-202ENST00000324340 RPL32P62910 135 aaKnown RBP9.18□□□□□ -0.94
DDX39A-202ENST00000324340 NRACQ8N912 160 aa9.18□□□□□ -0.94
DDX39A-202ENST00000324340 TOMM6Q96B49 74 aa9.18□□□□□ -0.94
DDX39A-202ENST00000324340 C16orf74Q96GX8 76 aa9.18□□□□□ -0.94
DDX39A-202ENST00000324340 SPXQ9BT56 116 aa9.18□□□□□ -0.94
DDX39A-202ENST00000324340 PLAC8L1A1L4L8 177 aa9.17□□□□□ -0.94
DDX39A-202ENST00000324340 SMIM9A6NGZ8 99 aa9.17□□□□□ -0.94
DDX39A-202ENST00000324340 PPP1R17O96001 155 aa9.17□□□□□ -0.94
DDX39A-202ENST00000324340 C10orf126Q8N4M7 172 aa9.17□□□□□ -0.94
DDX39A-202ENST00000324340 NEXN-AS1Q8NBZ9 246 aa9.17□□□□□ -0.94
DDX39A-202ENST00000324340 ANK2Q01484 3957 aa9.17□□□□□ -0.94
DDX39A-202ENST00000324340 LOC107984156A0A0G2JMH3 177 aa9.16□□□□□ -0.94
DDX39A-202ENST00000324340 FAM240AA0A1B0GVK7 77 aa9.16□□□□□ -0.94
DDX39A-202ENST00000324340 M0R2P5 195 aa9.16□□□□□ -0.94
DDX39A-202ENST00000324340 ARL17AQ8IVW1 177 aa9.16□□□□□ -0.94
DDX39A-202ENST00000324340 ANKRD29Q8N6D5 301 aa9.16□□□□□ -0.94
DDX39A-202ENST00000324340 KIF25-AS1Q9Y6Z4 181 aa9.16□□□□□ -0.94
DDX39A-202ENST00000324340 X6R8D5 127 aa9.16□□□□□ -0.94
DDX39A-202ENST00000324340 ZNF815PA8K554 130 aa9.15□□□□□ -0.94
DDX39A-202ENST00000324340 TCL1BO95988 128 aa9.15□□□□□ -0.94
DDX39A-202ENST00000324340 HERV-K104P63124 156 aa9.15□□□□□ -0.94
DDX39A-202ENST00000324340 SRSF9Q13242 221 aaKnown RBP eCLIP9.15□□□□□ -0.94
DDX39A-202ENST00000324340 ZNF876PQ49A33 203 aa9.15□□□□□ -0.94
DDX39A-202ENST00000324340 POM121L12Q8N7R1 296 aa9.15□□□□□ -0.94
DDX39A-202ENST00000324340 RASL10AQ92737 203 aa9.15□□□□□ -0.94
DDX39A-202ENST00000324340 PRADC1Q9BSG0 188 aa9.15□□□□□ -0.94
DDX39A-202ENST00000324340 SMIM2Q9BVW6 85 aa9.15□□□□□ -0.94
DDX39A-202ENST00000324340 DPH3P1Q9H4G8 78 aa9.15□□□□□ -0.94
DDX39A-202ENST00000324340 DAZ2Q13117 558 aaKnown RBP9.14□□□□□ -0.95
DDX39A-202ENST00000324340 DEFB135Q30KP9 77 aa9.14□□□□□ -0.95
DDX39A-202ENST00000324340 SCGB3A1Q96QR1 104 aa9.14□□□□□ -0.95
DDX39A-202ENST00000324340 OVOL2Q9BRP0 275 aa9.14□□□□□ -0.95
DDX39A-202ENST00000324340 PRO1854Q9UHT4 67 aa9.14□□□□□ -0.95
DDX39A-202ENST00000324340 A0A0B4J2C4 111 aa9.13□□□□□ -0.95
DDX39A-202ENST00000324340 SLC25A20O43772 301 aa9.13□□□□□ -0.95
DDX39A-202ENST00000324340 LINC00315P59091 139 aa9.13□□□□□ -0.95
DDX39A-202ENST00000324340 SCGB1D4Q6XE38 83 aa9.13□□□□□ -0.95
DDX39A-202ENST00000324340 C14orf178Q8N769 122 aaPredicted RBP9.13□□□□□ -0.95
DDX39A-202ENST00000324340 CRYGDP07320 174 aa9.12□□□□□ -0.95
DDX39A-202ENST00000324340 ZFP2Q6ZN57 461 aa9.12□□□□□ -0.95
DDX39A-202ENST00000324340 SLC25A29Q8N8R3 303 aa9.12□□□□□ -0.95
DDX39A-202ENST00000324340 IMUPQ9GZP8 106 aa9.12□□□□□ -0.95
DDX39A-202ENST00000324340 JPT2Q9H910 190 aa9.12□□□□□ -0.95
DDX39A-202ENST00000324340 TP53TG1Q9Y2A0 90 aa9.12□□□□□ -0.95
DDX39A-202ENST00000324340 CMYA5Q8N3K9 4069 aa9.12□□□□□ -0.95
DDX39A-202ENST00000324340 A0A0J9YY99 117 aa9.12□□□□□ -0.95
DDX39A-202ENST00000324340 K7EIL1 84 aa9.12□□□□□ -0.95
DDX39A-202ENST00000324340 PKD1L1Q8TDX9 2849 aa9.12□□□□□ -0.95
DDX39A-202ENST00000324340 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.11□□□□□ -0.95
DDX39A-202ENST00000324340 IGHV3-30P01768 117 aa9.11□□□□□ -0.95
DDX39A-202ENST00000324340 IGHV3-30-5P0DP03 117 aa9.11□□□□□ -0.95
DDX39A-202ENST00000324340 MIFP14174 115 aa9.11□□□□□ -0.95
DDX39A-202ENST00000324340 ATXN8Q156A1 80 aa9.11□□□□□ -0.95
DDX39A-202ENST00000324340 DEFB121Q5J5C9 76 aa9.11□□□□□ -0.95
DDX39A-202ENST00000324340 A0A087WWL8 130 aa9.1□□□□□ -0.95
DDX39A-202ENST00000324340 TRAV8-4A0A0B4J246 113 aa9.1□□□□□ -0.95
DDX39A-202ENST00000324340 TRBV7-7A0A0K0K1E9 115 aa9.1□□□□□ -0.95
DDX39A-202ENST00000324340 RS1O15537 224 aa9.1□□□□□ -0.95
DDX39A-202ENST00000324340 ATP5G1P05496 136 aa9.1□□□□□ -0.95
DDX39A-202ENST00000324340 CFC1BP0CG36 223 aa9.1□□□□□ -0.95
DDX39A-202ENST00000324340 CFC1P0CG37 223 aa9.1□□□□□ -0.95
DDX39A-202ENST00000324340 SMIM20Q8N5G0 67 aa9.1□□□□□ -0.95
DDX39A-202ENST00000324340 LINC00612Q8N6U2 182 aa9.1□□□□□ -0.95
DDX39A-202ENST00000324340 Q8NAQ8 132 aa9.1□□□□□ -0.95
DDX39A-202ENST00000324340 TMEM141Q96I45 108 aa9.1□□□□□ -0.95
DDX39A-202ENST00000324340 NOP10Q9NPE3 64 aaKnown RBP9.1□□□□□ -0.95
DDX39A-202ENST00000324340 TRGV1A0A0A0MS02 117 aa9.09□□□□□ -0.95
DDX39A-202ENST00000324340 TRBV10-2A0A0K0K1G8 114 aa9.09□□□□□ -0.95
DDX39A-202ENST00000324340 C11orf86A6NJI1 115 aa9.09□□□□□ -0.95
DDX39A-202ENST00000324340 H3BT86 120 aa9.09□□□□□ -0.95
DDX39A-202ENST00000324340 Q6ZTI0 123 aa9.09□□□□□ -0.95
DDX39A-202ENST00000324340 BAALCQ8WXS3 180 aa9.09□□□□□ -0.95
DDX39A-202ENST00000324340 EDA2RQ9HAV5 297 aa9.09□□□□□ -0.95
DDX39A-202ENST00000324340 NBEAL1Q6ZS30 2694 aa9.08□□□□□ -0.96
DDX39A-202ENST00000324340 CCDC179H3BU77 68 aa9.08□□□□□ -0.96
DDX39A-202ENST00000324340 GAS8-AS1O95177 125 aa9.08□□□□□ -0.96
DDX39A-202ENST00000324340 PRB2P02812 416 aaPredicted RBP9.08□□□□□ -0.96
DDX39A-202ENST00000324340 ACYP1P07311 99 aa9.08□□□□□ -0.96
DDX39A-202ENST00000324340 MGPP08493 103 aa9.08□□□□□ -0.96
DDX39A-202ENST00000324340 SUMO2P61956 95 aaKnown RBP9.08□□□□□ -0.96
DDX39A-202ENST00000324340 FAM74A4Q5TZK3 123 aa9.08□□□□□ -0.96
DDX39A-202ENST00000324340 TRAV26-2A0A0B4J265 109 aa9.07□□□□□ -0.96
DDX39A-202ENST00000324340 TRAV4A0A0B4J268 109 aa9.07□□□□□ -0.96
DDX39A-202ENST00000324340 IGHV4-28A0A0C4DH34 117 aa9.07□□□□□ -0.96
DDX39A-202ENST00000324340 TRBV30A0A0K0K1B3 111 aa9.07□□□□□ -0.96
DDX39A-202ENST00000324340 IGHV3-33P01772 117 aa9.07□□□□□ -0.96
DDX39A-202ENST00000324340 GATA1P15976 413 aaPredicted RBP9.07□□□□□ -0.96
DDX39A-202ENST00000324340 LINC01620Q4KN68 170 aa9.07□□□□□ -0.96
DDX39A-202ENST00000324340 LYRM9A8MSI8 78 aa9.06□□□□□ -0.96
DDX39A-202ENST00000324340 C9JAW5 83 aa9.06□□□□□ -0.96
DDX39A-202ENST00000324340 SUMO4Q6EEV6 95 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms