RNA–Protein interactions for RNA: ENST00000320857.7

SSR4-201, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSR4, Length 1,671 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-201ENST00000320857 Q6ZVH6 145 aa12.04□□□□□ -0.48
SSR4-201ENST00000320857 CEND1Q8N111 149 aa12.04□□□□□ -0.48
SSR4-201ENST00000320857 TM2D2Q9BX73 214 aa12.04□□□□□ -0.48
SSR4-201ENST00000320857 H3BRM9 83 aa12.03□□□□□ -0.48
SSR4-201ENST00000320857 LGALS3P17931 250 aaKnown RBP12.03□□□□□ -0.48
SSR4-201ENST00000320857 HIST1H4GQ99525 98 aa12.03□□□□□ -0.48
SSR4-201ENST00000320857 ANK2Q01484 3957 aa12.03□□□□□ -0.48
SSR4-201ENST00000320857 TINCRA0A1B0GVN0 87 aa12.03□□□□□ -0.48
SSR4-201ENST00000320857 LYRM9A8MSI8 78 aa12.03□□□□□ -0.48
SSR4-201ENST00000320857 J3QQQ9 107 aa12.03□□□□□ -0.48
SSR4-201ENST00000320857 RNASE13Q5GAN3 156 aaKnown RBP12.03□□□□□ -0.48
SSR4-201ENST00000320857 SCGB1D4Q6XE38 83 aa12.03□□□□□ -0.48
SSR4-201ENST00000320857 NTM-AS1Q6ZSK4 140 aa12.03□□□□□ -0.48
SSR4-201ENST00000320857 PLEKHB2Q96CS7 222 aa12.03□□□□□ -0.48
SSR4-201ENST00000320857 CSDC2Q9Y534 153 aaKnown RBP12.03□□□□□ -0.48
SSR4-201ENST00000320857 DNHD1Q96M86 4753 aa12.03□□□□□ -0.48
SSR4-201ENST00000320857 PTTG1IPP53801 180 aa12.02□□□□□ -0.49
SSR4-201ENST00000320857 DEFB135Q30KP9 77 aa12.02□□□□□ -0.49
SSR4-201ENST00000320857 SBSPONQ8IVN8 264 aa12.02□□□□□ -0.49
SSR4-201ENST00000320857 TMEM243Q9BU79 118 aa12.02□□□□□ -0.49
SSR4-201ENST00000320857 LOC100131303A0A0U1RQF7 123 aa12.01□□□□□ -0.49
SSR4-201ENST00000320857 FXYD2P54710 66 aa12.01□□□□□ -0.49
SSR4-201ENST00000320857 H7C423 109 aa12□□□□□ -0.49
SSR4-201ENST00000320857 UBE2L6O14933 153 aa12□□□□□ -0.49
SSR4-201ENST00000320857 SMIM13P0DJ93 91 aa12□□□□□ -0.49
SSR4-201ENST00000320857 UBE2D1P51668 147 aa12□□□□□ -0.49
SSR4-201ENST00000320857 TSPEAR-AS2P59090 65 aa12□□□□□ -0.49
SSR4-201ENST00000320857 GEMIN7Q9H840 131 aaKnown RBP12□□□□□ -0.49
SSR4-201ENST00000320857 LINC00694P0DN24 101 aa11.99□□□□□ -0.49
SSR4-201ENST00000320857 IGHV4-30-4P0DP06 118 aa11.99□□□□□ -0.49
SSR4-201ENST00000320857 VAMP3Q15836 100 aa11.99□□□□□ -0.49
SSR4-201ENST00000320857 FAM222AQ5U5X8 452 aa11.99□□□□□ -0.49
SSR4-201ENST00000320857 MIFP14174 115 aa11.98□□□□□ -0.49
SSR4-201ENST00000320857 TIRAPP58753 221 aa11.98□□□□□ -0.49
SSR4-201ENST00000320857 AMMECR1LQ6DCA0 310 aa11.98□□□□□ -0.49
SSR4-201ENST00000320857 OR5A1Q8NGJ0 315 aa11.98□□□□□ -0.49
SSR4-201ENST00000320857 TMEM101Q96IK0 257 aa11.98□□□□□ -0.49
SSR4-201ENST00000320857 IGHV4-28A0A0C4DH34 117 aa11.97□□□□□ -0.49
SSR4-201ENST00000320857 C9orf118A6NHY6 69 aa11.97□□□□□ -0.49
SSR4-201ENST00000320857 TRRAPQ9Y4A5 3859 aa11.97□□□□□ -0.49
SSR4-201ENST00000320857 A0A0J9YY99 117 aa11.97□□□□□ -0.49
SSR4-201ENST00000320857 IGHV3-64A0A075B6Q5 118 aa11.96□□□□□ -0.5
SSR4-201ENST00000320857 IGHV1-58A0A0C4DH39 117 aa11.96□□□□□ -0.5
SSR4-201ENST00000320857 SRSF9Q13242 221 aaKnown RBP eCLIP11.96□□□□□ -0.5
SSR4-201ENST00000320857 UBE2V1Q13404 147 aa11.96□□□□□ -0.5
SSR4-201ENST00000320857 OXLD1Q5BKU9 147 aa11.96□□□□□ -0.5
SSR4-201ENST00000320857 RNF183Q96D59 192 aa11.96□□□□□ -0.5
SSR4-201ENST00000320857 PRO0255Q9UI72 69 aa11.96□□□□□ -0.5
SSR4-201ENST00000320857 K7EP13 123 aa11.95□□□□□ -0.5
SSR4-201ENST00000320857 CDC42SE2Q9NRR3 84 aa11.95□□□□□ -0.5
SSR4-201ENST00000320857 SPANXB1Q9NS25 103 aaPredicted RBP11.95□□□□□ -0.5
SSR4-201ENST00000320857 NHP2Q9NX24 153 aaKnown RBP11.95□□□□□ -0.5
SSR4-201ENST00000320857 IGLV5-45A0A087WSX0 123 aa11.94□□□□□ -0.5
SSR4-201ENST00000320857 TRBV6-8A0A0A6YYG3 113 aa11.94□□□□□ -0.5
SSR4-201ENST00000320857 IGHV3-30-3P0DP02 117 aa11.94□□□□□ -0.5
SSR4-201ENST00000320857 GYPEP15421 78 aa11.94□□□□□ -0.5
SSR4-201ENST00000320857 HERVK_113P63121 156 aa11.94□□□□□ -0.5
SSR4-201ENST00000320857 FAM19A3Q7Z5A8 133 aa11.94□□□□□ -0.5
SSR4-201ENST00000320857 RAB37Q96AX2 223 aa11.94□□□□□ -0.5
SSR4-201ENST00000320857 DAD1P61803 113 aa11.94□□□□□ -0.5
SSR4-201ENST00000320857 EGFEM1PQ0D2K5 195 aa11.94□□□□□ -0.5
SSR4-201ENST00000320857 Q8NAQ8 132 aa11.94□□□□□ -0.5
SSR4-201ENST00000320857 TMEM238LA0A1B0GVL6 79 aa11.93□□□□□ -0.5
SSR4-201ENST00000320857 A6NJY4 79 aa11.93□□□□□ -0.5
SSR4-201ENST00000320857 KRTAP10-11P60412 298 aa11.93□□□□□ -0.5
SSR4-201ENST00000320857 ATP6V0E2Q8NHE4 81 aa11.93□□□□□ -0.5
SSR4-201ENST00000320857 VSIG2Q96IQ7 327 aa11.93□□□□□ -0.5
SSR4-201ENST00000320857 H3BUT2 72 aa11.92□□□□□ -0.5
SSR4-201ENST00000320857 DEFB4AO15263 64 aa11.92□□□□□ -0.5
SSR4-201ENST00000320857 TRAV8-3A0A0A6YYJ7 113 aa11.91□□□□□ -0.5
SSR4-201ENST00000320857 PAX4O43316 350 aa11.91□□□□□ -0.5
SSR4-201ENST00000320857 SPINK8P0C7L1 97 aa11.91□□□□□ -0.5
SSR4-201ENST00000320857 GAGE6Q13070 117 aa11.91□□□□□ -0.5
SSR4-201ENST00000320857 C12orf74Q32Q52 190 aa11.91□□□□□ -0.5
SSR4-201ENST00000320857 LINC00242Q5T6M2 205 aa11.91□□□□□ -0.5
SSR4-201ENST00000320857 CHCHD5Q9BSY4 110 aa11.91□□□□□ -0.5
SSR4-201ENST00000320857 CMYA5Q8N3K9 4069 aa11.91□□□□□ -0.5
SSR4-201ENST00000320857 TRAV13-1A0A0B4J241 112 aa11.91□□□□□ -0.5
SSR4-201ENST00000320857 K7ERJ3 54 aa11.91□□□□□ -0.5
SSR4-201ENST00000320857 SPART-AS1P0CW21 52 aa11.91□□□□□ -0.5
SSR4-201ENST00000320857 CDKN2A-AS1Q9UH64 79 aa11.91□□□□□ -0.5
SSR4-201ENST00000320857 A0A1B0GWB2 263 aa11.9□□□□□ -0.5
SSR4-201ENST00000320857 A8MZ25 164 aa11.9□□□□□ -0.5
SSR4-201ENST00000320857 CCL25O15444 150 aa11.9□□□□□ -0.5
SSR4-201ENST00000320857 ATP5G1P05496 136 aa11.89□□□□□ -0.51
SSR4-201ENST00000320857 COX6A2Q02221 97 aa11.89□□□□□ -0.51
SSR4-201ENST00000320857 TMEM238C9JI98 176 aa11.88□□□□□ -0.51
SSR4-201ENST00000320857 SAMD5Q5TGI4 173 aa11.88□□□□□ -0.51
SSR4-201ENST00000320857 NDUFA12Q9UI09 145 aa11.88□□□□□ -0.51
SSR4-201ENST00000320857 A0A0J9YXY3 114 aa11.87□□□□□ -0.51
SSR4-201ENST00000320857 TEX48A0A1B0GUV7 120 aa11.87□□□□□ -0.51
SSR4-201ENST00000320857 IGHV3-30P01768 117 aa11.87□□□□□ -0.51
SSR4-201ENST00000320857 IGHV3-30-5P0DP03 117 aa11.87□□□□□ -0.51
SSR4-201ENST00000320857 C10orf126Q8N4M7 172 aa11.87□□□□□ -0.51
SSR4-201ENST00000320857 A0A1W2PPM0 123 aa11.87□□□□□ -0.51
SSR4-201ENST00000320857 ZFAND6Q6FIF0 208 aa11.87□□□□□ -0.51
SSR4-201ENST00000320857 GTF2H5Q6ZYL4 71 aa11.87□□□□□ -0.51
SSR4-201ENST00000320857 NAA38Q9BRA0 125 aaKnown RBP11.87□□□□□ -0.51
SSR4-201ENST00000320857 CELA1Q9UNI1 258 aa11.87□□□□□ -0.51
SSR4-201ENST00000320857 PKD1L1Q8TDX9 2849 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms