RNA–Protein interactions for RNA: ENST00000315585.11

CHFR-202, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-202ENST00000315585 CRLF1O75462 422 aa10.75□□□□□ -0.69
CHFR-202ENST00000315585 C1orf158Q8N1D5 194 aa10.75□□□□□ -0.69
CHFR-202ENST00000315585 FAM104AQ969W3 186 aa10.75□□□□□ -0.69
CHFR-202ENST00000315585 RNF183Q96D59 192 aa10.75□□□□□ -0.69
CHFR-202ENST00000315585 C1QTNF4Q9BXJ3 329 aa10.75□□□□□ -0.69
CHFR-202ENST00000315585 CSDC2Q9Y534 153 aaKnown RBP10.75□□□□□ -0.69
CHFR-202ENST00000315585 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.75□□□□□ -0.69
CHFR-202ENST00000315585 TRAV4A0A0B4J268 109 aa10.75□□□□□ -0.69
CHFR-202ENST00000315585 IGKV2-29A2NJV5 120 aaPredicted RBP10.75□□□□□ -0.69
CHFR-202ENST00000315585 TIMM17BO60830 172 aa10.75□□□□□ -0.69
CHFR-202ENST00000315585 SH2D6Q7Z4S9 175 aa10.75□□□□□ -0.69
CHFR-202ENST00000315585 SPANXDQ9BXN6 97 aa10.75□□□□□ -0.69
CHFR-202ENST00000315585 SPANXCQ9NY87 97 aa10.75□□□□□ -0.69
CHFR-202ENST00000315585 IGHV3OR16-12A0A075B7B8 117 aa10.74□□□□□ -0.69
CHFR-202ENST00000315585 HERVK_113P63121 156 aa10.74□□□□□ -0.69
CHFR-202ENST00000315585 CEMP1Q6PRD7 247 aaPredicted RBP10.74□□□□□ -0.69
CHFR-202ENST00000315585 SIGMAR1Q99720 223 aa10.74□□□□□ -0.69
CHFR-202ENST00000315585 HECTD1Q9ULT8 2610 aa10.74□□□□□ -0.69
CHFR-202ENST00000315585 PF4P02776 101 aa10.74□□□□□ -0.69
CHFR-202ENST00000315585 CIRBPQ14011 172 aaKnown RBP10.74□□□□□ -0.69
CHFR-202ENST00000315585 COPS9Q8WXC6 57 aa10.74□□□□□ -0.69
CHFR-202ENST00000315585 K7EQD1 137 aa10.73□□□□□ -0.69
CHFR-202ENST00000315585 IGLV1-51P01701 117 aa10.73□□□□□ -0.69
CHFR-202ENST00000315585 IGHV3-33P01772 117 aa10.73□□□□□ -0.69
CHFR-202ENST00000315585 IFITM1P13164 125 aa10.73□□□□□ -0.69
CHFR-202ENST00000315585 ZFAND6Q6FIF0 208 aa10.73□□□□□ -0.69
CHFR-202ENST00000315585 IGLV5-45A0A087WSX0 123 aa10.73□□□□□ -0.69
CHFR-202ENST00000315585 Q6ZUT4 128 aa10.73□□□□□ -0.69
CHFR-202ENST00000315585 C16orf74Q96GX8 76 aa10.73□□□□□ -0.69
CHFR-202ENST00000315585 IGHV3-38A0A0C4DH36 116 aa10.72□□□□□ -0.69
CHFR-202ENST00000315585 GAGE12HA6NDE8 117 aa10.72□□□□□ -0.69
CHFR-202ENST00000315585 M0QXV9 152 aa10.72□□□□□ -0.69
CHFR-202ENST00000315585 PRSS2P07478 247 aa10.72□□□□□ -0.69
CHFR-202ENST00000315585 SCGB1A1P11684 91 aa10.72□□□□□ -0.69
CHFR-202ENST00000315585 NACAE9PAV3 2078 aa10.72□□□□□ -0.69
CHFR-202ENST00000315585 TCL1BO95988 128 aa10.72□□□□□ -0.69
CHFR-202ENST00000315585 FOXI1Q12951 378 aa10.72□□□□□ -0.69
CHFR-202ENST00000315585 TRAV8-3A0A0A6YYJ7 113 aa10.71□□□□□ -0.69
CHFR-202ENST00000315585 Q1RN00 199 aa10.71□□□□□ -0.69
CHFR-202ENST00000315585 SPATA25Q9BR10 227 aa10.71□□□□□ -0.69
CHFR-202ENST00000315585 COX6CP09669 75 aa10.7□□□□□ -0.7
CHFR-202ENST00000315585 MIAQ16674 131 aa10.7□□□□□ -0.7
CHFR-202ENST00000315585 SFTA2Q6UW10 78 aa10.7□□□□□ -0.7
CHFR-202ENST00000315585 FAM19A3Q7Z5A8 133 aa10.7□□□□□ -0.7
CHFR-202ENST00000315585 TEN1Q86WV5 123 aa10.7□□□□□ -0.7
CHFR-202ENST00000315585 SBSPONQ8IVN8 264 aa10.7□□□□□ -0.7
CHFR-202ENST00000315585 Q9UF83 564 aa10.7□□□□□ -0.7
CHFR-202ENST00000315585 RNASE13Q5GAN3 156 aaKnown RBP10.7□□□□□ -0.7
CHFR-202ENST00000315585 PPDPFLQ8WWR9 84 aa10.7□□□□□ -0.7
CHFR-202ENST00000315585 AKAP9Q99996 3911 aa10.7□□□□□ -0.7
CHFR-202ENST00000315585 TRBV30A0A0K0K1B3 111 aa10.69□□□□□ -0.7
CHFR-202ENST00000315585 SPINK8P0C7L1 97 aa10.69□□□□□ -0.7
CHFR-202ENST00000315585 ATXN8Q156A1 80 aa10.69□□□□□ -0.7
CHFR-202ENST00000315585 MTURNQ8N3F0 131 aa10.69□□□□□ -0.7
CHFR-202ENST00000315585 GTSF1LQ9H1H1 148 aa10.69□□□□□ -0.7
CHFR-202ENST00000315585 H7C423 109 aa10.69□□□□□ -0.7
CHFR-202ENST00000315585 NDUFA1O15239 70 aa10.69□□□□□ -0.7
CHFR-202ENST00000315585 KRTAP10-3P60369 221 aa10.69□□□□□ -0.7
CHFR-202ENST00000315585 LITAFQ99732 161 aa10.69□□□□□ -0.7
CHFR-202ENST00000315585 TMEM101Q96IK0 257 aa10.68□□□□□ -0.7
CHFR-202ENST00000315585 CDKN2A-AS1Q9UH64 79 aa10.68□□□□□ -0.7
CHFR-202ENST00000315585 SMCPP49901 116 aaPredicted RBP10.67□□□□□ -0.7
CHFR-202ENST00000315585 Q6ZTI0 123 aa10.67□□□□□ -0.7
CHFR-202ENST00000315585 LINC00482Q8N8I6 264 aa10.67□□□□□ -0.7
CHFR-202ENST00000315585 MTORP42345 2549 aa10.67□□□□□ -0.7
CHFR-202ENST00000315585 UBE2L6O14933 153 aa10.67□□□□□ -0.7
CHFR-202ENST00000315585 INSL3P51460 131 aa10.67□□□□□ -0.7
CHFR-202ENST00000315585 ANK3Q12955 4377 aaKnown RBP10.67□□□□□ -0.7
CHFR-202ENST00000315585 TRGV2A0A075B6R0 118 aa10.66□□□□□ -0.7
CHFR-202ENST00000315585 TRBV6-4A0A1B0GX49 114 aa10.66□□□□□ -0.7
CHFR-202ENST00000315585 NOP10Q9NPE3 64 aaKnown RBP10.66□□□□□ -0.7
CHFR-202ENST00000315585 H7C2G1 150 aa10.65□□□□□ -0.7
CHFR-202ENST00000315585 SLC25A20O43772 301 aa10.65□□□□□ -0.7
CHFR-202ENST00000315585 OVOL2Q9BRP0 275 aa10.65□□□□□ -0.7
CHFR-202ENST00000315585 TMEM243Q9BU79 118 aa10.65□□□□□ -0.7
CHFR-202ENST00000315585 IGLV5-39A0A0G2JS06 123 aa10.65□□□□□ -0.71
CHFR-202ENST00000315585 LINC00242Q5T6M2 205 aa10.65□□□□□ -0.71
CHFR-202ENST00000315585 TMEM262E9PQX1 116 aa10.64□□□□□ -0.71
CHFR-202ENST00000315585 HERV-K104P63124 156 aa10.64□□□□□ -0.71
CHFR-202ENST00000315585 GAGE12JA6NER3 117 aa10.63□□□□□ -0.71
CHFR-202ENST00000315585 GAGE4Q13068 117 aa10.63□□□□□ -0.71
CHFR-202ENST00000315585 GAGE5Q13069 117 aa10.63□□□□□ -0.71
CHFR-202ENST00000315585 ADAMTSL4-AS1Q5T5F5 129 aa10.63□□□□□ -0.71
CHFR-202ENST00000315585 C9orf66Q5T8R8 295 aa10.63□□□□□ -0.71
CHFR-202ENST00000315585 CDC42SE2Q9NRR3 84 aa10.63□□□□□ -0.71
CHFR-202ENST00000315585 NOTCH2Q04721 2471 aa10.63□□□□□ -0.71
CHFR-202ENST00000315585 C9JAW5 83 aa10.63□□□□□ -0.71
CHFR-202ENST00000315585 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.62□□□□□ -0.71
CHFR-202ENST00000315585 LINC01600Q96MT4 127 aa10.62□□□□□ -0.71
CHFR-202ENST00000315585 TRGV4A0A0C4DH28 118 aa10.62□□□□□ -0.71
CHFR-202ENST00000315585 EIF4EBP3O60516 100 aaPredicted RBP10.62□□□□□ -0.71
CHFR-202ENST00000315585 GIG44P09565 113 aaPredicted RBP10.62□□□□□ -0.71
CHFR-202ENST00000315585 PPDPFQ9H3Y8 114 aa10.62□□□□□ -0.71
CHFR-202ENST00000315585 C19orf73Q9NVV2 129 aa10.62□□□□□ -0.71
CHFR-202ENST00000315585 ICOSQ9Y6W8 199 aa10.62□□□□□ -0.71
CHFR-202ENST00000315585 NTM-AS1Q6ZSK4 140 aa10.61□□□□□ -0.71
CHFR-202ENST00000315585 ANKRD29Q8N6D5 301 aa10.61□□□□□ -0.71
CHFR-202ENST00000315585 CITED1Q99966 193 aa10.61□□□□□ -0.71
CHFR-202ENST00000315585 OTOGQ6ZRI0 2925 aa10.61□□□□□ -0.71
CHFR-202ENST00000315585 TRAV13-1A0A0B4J241 112 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 133.8 ms