RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 DGAT2L7PQ6IED9 249 aa12.98□□□□□ -0.33
CCDC43-201ENST00000315286 H3BRM9 83 aa12.97□□□□□ -0.33
CCDC43-201ENST00000315286 J3QQQ9 107 aa12.97□□□□□ -0.33
CCDC43-201ENST00000315286 SCGB1D4Q6XE38 83 aa12.97□□□□□ -0.33
CCDC43-201ENST00000315286 SBSPONQ8IVN8 264 aa12.97□□□□□ -0.33
CCDC43-201ENST00000315286 FBN1P35555 2871 aaKnown RBP12.97□□□□□ -0.33
CCDC43-201ENST00000315286 IGHV3-64A0A075B6Q5 118 aa12.97□□□□□ -0.33
CCDC43-201ENST00000315286 PTTG1IPP53801 180 aa12.97□□□□□ -0.33
CCDC43-201ENST00000315286 LEPROTO15243 131 aa12.96□□□□□ -0.33
CCDC43-201ENST00000315286 GTSF1LQ9H1H1 148 aa12.96□□□□□ -0.33
CCDC43-201ENST00000315286 TINCRA0A1B0GVN0 87 aa12.95□□□□□ -0.34
CCDC43-201ENST00000315286 VAMP3Q15836 100 aa12.95□□□□□ -0.34
CCDC43-201ENST00000315286 BAHCC1Q9P281 2608 aa12.95□□□□□ -0.34
CCDC43-201ENST00000315286 LGALS3P17931 250 aaKnown RBP12.95□□□□□ -0.34
CCDC43-201ENST00000315286 UBE2D1P51668 147 aa12.95□□□□□ -0.34
CCDC43-201ENST00000315286 RAB37Q96AX2 223 aa12.95□□□□□ -0.34
CCDC43-201ENST00000315286 STAB1Q9NY15 2570 aa12.94□□□□□ -0.34
CCDC43-201ENST00000315286 A0A0J9YY99 117 aa12.93□□□□□ -0.34
CCDC43-201ENST00000315286 CYSRT1A8MQ03 144 aa12.93□□□□□ -0.34
CCDC43-201ENST00000315286 DEFB4AO15263 64 aa12.93□□□□□ -0.34
CCDC43-201ENST00000315286 FAM222AQ5U5X8 452 aa12.93□□□□□ -0.34
CCDC43-201ENST00000315286 CSDC2Q9Y534 153 aaKnown RBP12.93□□□□□ -0.34
CCDC43-201ENST00000315286 C9orf118A6NHY6 69 aa12.93□□□□□ -0.34
CCDC43-201ENST00000315286 SMIM13P0DJ93 91 aa12.93□□□□□ -0.34
CCDC43-201ENST00000315286 IGHV4-30-4P0DP06 118 aa12.93□□□□□ -0.34
CCDC43-201ENST00000315286 UBE2V1Q13404 147 aa12.93□□□□□ -0.34
CCDC43-201ENST00000315286 K7ERJ3 54 aa12.92□□□□□ -0.34
CCDC43-201ENST00000315286 CCL25O15444 150 aa12.92□□□□□ -0.34
CCDC43-201ENST00000315286 OXLD1Q5BKU9 147 aa12.92□□□□□ -0.34
CCDC43-201ENST00000315286 AMMECR1LQ6DCA0 310 aa12.92□□□□□ -0.34
CCDC43-201ENST00000315286 TMEM243Q9BU79 118 aa12.92□□□□□ -0.34
CCDC43-201ENST00000315286 NHP2Q9NX24 153 aaKnown RBP12.92□□□□□ -0.34
CCDC43-201ENST00000315286 NAA38Q9BRA0 125 aaKnown RBP12.92□□□□□ -0.34
CCDC43-201ENST00000315286 TRAV8-3A0A0A6YYJ7 113 aa12.91□□□□□ -0.34
CCDC43-201ENST00000315286 IGHV4-28A0A0C4DH34 117 aa12.91□□□□□ -0.34
CCDC43-201ENST00000315286 IGHV3-30-3P0DP02 117 aa12.91□□□□□ -0.34
CCDC43-201ENST00000315286 GEMIN7Q9H840 131 aaKnown RBP12.91□□□□□ -0.34
CCDC43-201ENST00000315286 LYRM9A8MSI8 78 aa12.9□□□□□ -0.34
CCDC43-201ENST00000315286 CDC42SE2Q9NRR3 84 aa12.9□□□□□ -0.34
CCDC43-201ENST00000315286 H3BUT2 72 aa12.9□□□□□ -0.34
CCDC43-201ENST00000315286 UBE2L6O14933 153 aa12.9□□□□□ -0.34
CCDC43-201ENST00000315286 SRSF9Q13242 221 aaKnown RBP eCLIP12.9□□□□□ -0.34
CCDC43-201ENST00000315286 C3orf56Q8N813 242 aa12.9□□□□□ -0.34
CCDC43-201ENST00000315286 TIRAPP58753 221 aa12.89□□□□□ -0.35
CCDC43-201ENST00000315286 OR5A1Q8NGJ0 315 aa12.89□□□□□ -0.35
CCDC43-201ENST00000315286 IGHV1-58A0A0C4DH39 117 aa12.89□□□□□ -0.35
CCDC43-201ENST00000315286 SPINK8P0C7L1 97 aa12.89□□□□□ -0.35
CCDC43-201ENST00000315286 COX6A2Q02221 97 aa12.89□□□□□ -0.35
CCDC43-201ENST00000315286 CDKN2A-AS1Q9UH64 79 aa12.89□□□□□ -0.35
CCDC43-201ENST00000315286 TRBV6-8A0A0A6YYG3 113 aa12.88□□□□□ -0.35
CCDC43-201ENST00000315286 GYPEP15421 78 aa12.88□□□□□ -0.35
CCDC43-201ENST00000315286 SMAGPQ0VAQ4 97 aa12.88□□□□□ -0.35
CCDC43-201ENST00000315286 PKD1L1Q8TDX9 2849 aa12.87□□□□□ -0.35
CCDC43-201ENST00000315286 C12orf74Q32Q52 190 aa12.87□□□□□ -0.35
CCDC43-201ENST00000315286 LINC00242Q5T6M2 205 aa12.87□□□□□ -0.35
CCDC43-201ENST00000315286 Q8NAQ8 132 aa12.87□□□□□ -0.35
CCDC43-201ENST00000315286 VSIG2Q96IQ7 327 aa12.87□□□□□ -0.35
CCDC43-201ENST00000315286 CMYA5Q8N3K9 4069 aa12.87□□□□□ -0.35
CCDC43-201ENST00000315286 IGLV5-45A0A087WSX0 123 aa12.87□□□□□ -0.35
CCDC43-201ENST00000315286 KRTAP10-11P60412 298 aa12.87□□□□□ -0.35
CCDC43-201ENST00000315286 PRIMA1Q86XR5 153 aa12.87□□□□□ -0.35
CCDC43-201ENST00000315286 RNF183Q96D59 192 aa12.87□□□□□ -0.35
CCDC43-201ENST00000315286 PRO0255Q9UI72 69 aa12.87□□□□□ -0.35
CCDC43-201ENST00000315286 TRAV13-1A0A0B4J241 112 aa12.86□□□□□ -0.35
CCDC43-201ENST00000315286 A8MZ25 164 aa12.86□□□□□ -0.35
CCDC43-201ENST00000315286 H7C423 109 aa12.86□□□□□ -0.35
CCDC43-201ENST00000315286 MIFP14174 115 aa12.86□□□□□ -0.35
CCDC43-201ENST00000315286 GAGE6Q13070 117 aa12.86□□□□□ -0.35
CCDC43-201ENST00000315286 TMEM101Q96IK0 257 aa12.86□□□□□ -0.35
CCDC43-201ENST00000315286 SPANXB1Q9NS25 103 aaPredicted RBP12.86□□□□□ -0.35
CCDC43-201ENST00000315286 MAST4O15021 2626 aa12.86□□□□□ -0.35
CCDC43-201ENST00000315286 C10orf126Q8N4M7 172 aa12.85□□□□□ -0.35
CCDC43-201ENST00000315286 SHISA2Q6UWI4 295 aa12.85□□□□□ -0.35
CCDC43-201ENST00000315286 FAM19A3Q7Z5A8 133 aa12.85□□□□□ -0.35
CCDC43-201ENST00000315286 HERVK_113P63121 156 aa12.84□□□□□ -0.35
CCDC43-201ENST00000315286 ATP6V0E2Q8NHE4 81 aa12.84□□□□□ -0.35
CCDC43-201ENST00000315286 CELA1Q9UNI1 258 aa12.84□□□□□ -0.35
CCDC43-201ENST00000315286 CHCHD5Q9BSY4 110 aa12.84□□□□□ -0.35
CCDC43-201ENST00000315286 A0A1B0GWB2 263 aa12.83□□□□□ -0.36
CCDC43-201ENST00000315286 A0A1W2PPM0 123 aa12.83□□□□□ -0.36
CCDC43-201ENST00000315286 IGHV3-30P01768 117 aa12.83□□□□□ -0.36
CCDC43-201ENST00000315286 IGHV3-30-5P0DP03 117 aa12.83□□□□□ -0.36
CCDC43-201ENST00000315286 DAD1P61803 113 aa12.83□□□□□ -0.36
CCDC43-201ENST00000315286 SAMD5Q5TGI4 173 aa12.83□□□□□ -0.36
CCDC43-201ENST00000315286 A0A0J9YXY3 114 aa12.82□□□□□ -0.36
CCDC43-201ENST00000315286 PAX4O43316 350 aa12.82□□□□□ -0.36
CCDC43-201ENST00000315286 NDUFA12Q9UI09 145 aa12.82□□□□□ -0.36
CCDC43-201ENST00000315286 IGLV4-60A0A075B6I1 120 aa12.81□□□□□ -0.36
CCDC43-201ENST00000315286 A0A096LPF7 62 aa12.81□□□□□ -0.36
CCDC43-201ENST00000315286 GAGE10A6NGK3 116 aa12.81□□□□□ -0.36
CCDC43-201ENST00000315286 EGFEM1PQ0D2K5 195 aa12.81□□□□□ -0.36
CCDC43-201ENST00000315286 TMEM238LA0A1B0GVL6 79 aa12.8□□□□□ -0.36
CCDC43-201ENST00000315286 A6NJY4 79 aa12.8□□□□□ -0.36
CCDC43-201ENST00000315286 IGLL5B9A064 214 aa12.8□□□□□ -0.36
CCDC43-201ENST00000315286 SPART-AS1P0CW21 52 aa12.79□□□□□ -0.36
CCDC43-201ENST00000315286 ZFAND6Q6FIF0 208 aa12.79□□□□□ -0.36
CCDC43-201ENST00000315286 COL6A5A8TX70 2615 aa12.79□□□□□ -0.36
CCDC43-201ENST00000315286 IGLV5-39A0A0G2JS06 123 aa12.78□□□□□ -0.36
CCDC43-201ENST00000315286 ATP5G1P05496 136 aa12.78□□□□□ -0.36
CCDC43-201ENST00000315286 FABP2P12104 132 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms