RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 C20orf173Q96LM9 149 aa6.16□□□□□ -1.42
VPS41-202ENST00000310301 DYSFO75923 2080 aa6.16□□□□□ -1.42
VPS41-202ENST00000310301 LRRK2Q5S007 2527 aa6.16□□□□□ -1.42
VPS41-202ENST00000310301 LINC01006Q8NI28 216 aa6.16□□□□□ -1.42
VPS41-202ENST00000310301 EML5Q05BV3 1969 aa6.16□□□□□ -1.42
VPS41-202ENST00000310301 ODF3BA8MYP8 253 aa6.15□□□□□ -1.42
VPS41-202ENST00000310301 LINC00308Q8TCZ7 52 aa6.15□□□□□ -1.42
VPS41-202ENST00000310301 NCKAP5O14513 1909 aa6.15□□□□□ -1.42
VPS41-202ENST00000310301 IGKV1D-37A0A075B6S9 117 aa6.15□□□□□ -1.43
VPS41-202ENST00000310301 SMIM9A6NGZ8 99 aa6.15□□□□□ -1.43
VPS41-202ENST00000310301 ZNF22P17026 224 aaPredicted RBP6.15□□□□□ -1.43
VPS41-202ENST00000310301 FREM1Q5H8C1 2179 aa6.15□□□□□ -1.43
VPS41-202ENST00000310301 SPART-AS1P0CW21 52 aa6.14□□□□□ -1.43
VPS41-202ENST00000310301 CASC2Q6XLA1 102 aa6.14□□□□□ -1.43
VPS41-202ENST00000310301 KLK12Q9UKR0 248 aa6.14□□□□□ -1.43
VPS41-202ENST00000310301 WFDC10BQ8IUB3 73 aa6.14□□□□□ -1.43
VPS41-202ENST00000310301 K7EMT4 169 aa6.14□□□□□ -1.43
VPS41-202ENST00000310301 GPHB5Q86YW7 130 aa6.14□□□□□ -1.43
VPS41-202ENST00000310301 CDKN2A-AS1Q9UH64 79 aa6.14□□□□□ -1.43
VPS41-202ENST00000310301 PRR15LQ9BU68 103 aa6.13□□□□□ -1.43
VPS41-202ENST00000310301 CCL18P55774 89 aa6.13□□□□□ -1.43
VPS41-202ENST00000310301 ZFAND2AQ8N6M9 145 aa6.13□□□□□ -1.43
VPS41-202ENST00000310301 PRR4Q16378 134 aa6.12□□□□□ -1.43
VPS41-202ENST00000310301 LINC00467Q9BRT7 94 aa6.12□□□□□ -1.43
VPS41-202ENST00000310301 A0A0J9YWU9 116 aa6.12□□□□□ -1.43
VPS41-202ENST00000310301 TRBV27A0A0K0K1C4 114 aa6.12□□□□□ -1.43
VPS41-202ENST00000310301 IGLV4-3A0A075B6K6 122 aa6.12□□□□□ -1.43
VPS41-202ENST00000310301 SMIM26A0A096LP01 95 aa6.12□□□□□ -1.43
VPS41-202ENST00000310301 K7ERS5 55 aa6.12□□□□□ -1.43
VPS41-202ENST00000310301 P0C879 139 aa6.12□□□□□ -1.43
VPS41-202ENST00000310301 U3KQK5 164 aa6.12□□□□□ -1.43
VPS41-202ENST00000310301 FAM19A3Q7Z5A8 133 aa6.12□□□□□ -1.43
VPS41-202ENST00000310301 IGF1P05019 195 aa6.12□□□□□ -1.43
VPS41-202ENST00000310301 MED12LQ86YW9 2145 aa6.11□□□□□ -1.43
VPS41-202ENST00000310301 UNQ9165/PRO28630Q6UXU0 137 aa6.11□□□□□ -1.43
VPS41-202ENST00000310301 A0A0J9YX75 114 aa6.11□□□□□ -1.43
VPS41-202ENST00000310301 UFSP1Q6NVU6 142 aa6.11□□□□□ -1.43
VPS41-202ENST00000310301 ABCA2Q9BZC7 2435 aa6.11□□□□□ -1.43
VPS41-202ENST00000310301 ZFAND3Q9H8U3 227 aa6.11□□□□□ -1.43
VPS41-202ENST00000310301 RNF185Q96GF1 192 aa6.1□□□□□ -1.43
VPS41-202ENST00000310301 JMJD1CQ15652 2540 aa6.1□□□□□ -1.43
VPS41-202ENST00000310301 TRBV10-1A0A0K0K1A3 114 aa6.1□□□□□ -1.43
VPS41-202ENST00000310301 F8W735 103 aaPredicted RBP6.1□□□□□ -1.43
VPS41-202ENST00000310301 H7C423 109 aa6.1□□□□□ -1.43
VPS41-202ENST00000310301 LST1O00453 97 aa6.1□□□□□ -1.43
VPS41-202ENST00000310301 DEFB4AO15263 64 aa6.1□□□□□ -1.43
VPS41-202ENST00000310301 Q6Q795 121 aa6.1□□□□□ -1.43
VPS41-202ENST00000310301 B9D2Q9BPU9 175 aa6.1□□□□□ -1.43
VPS41-202ENST00000310301 C16orf95Q9H693 158 aa6.1□□□□□ -1.43
VPS41-202ENST00000310301 LINC00574Q9H8X3 128 aa6.1□□□□□ -1.43
VPS41-202ENST00000310301 ATG2AQ2TAZ0 1938 aa6.1□□□□□ -1.43
VPS41-202ENST00000310301 FLNBO75369 2602 aaKnown RBP6.1□□□□□ -1.43
VPS41-202ENST00000310301 C3orf84H3BNL1 204 aa6.1□□□□□ -1.43
VPS41-202ENST00000310301 CCKP06307 115 aa6.1□□□□□ -1.43
VPS41-202ENST00000310301 PTPRBP23467 1997 aa6.1□□□□□ -1.43
VPS41-202ENST00000310301 LINC00269Q8N2A0 174 aa6.09□□□□□ -1.43
VPS41-202ENST00000310301 SERP1Q9Y6X1 66 aa6.09□□□□□ -1.43
VPS41-202ENST00000310301 CRIP1P50238 77 aa6.09□□□□□ -1.43
VPS41-202ENST00000310301 C4orf48Q5BLP8 95 aa6.09□□□□□ -1.43
VPS41-202ENST00000310301 DSCAML1Q8TD84 2053 aa6.09□□□□□ -1.43
VPS41-202ENST00000310301 A0A1W2PPR1 153 aa6.09□□□□□ -1.43
VPS41-202ENST00000310301 HIGD2AQ9BW72 106 aa6.09□□□□□ -1.43
VPS41-202ENST00000310301 A8MZ25 164 aa6.09□□□□□ -1.43
VPS41-202ENST00000310301 IBA57-AS1B1ANH7 110 aa6.09□□□□□ -1.43
VPS41-202ENST00000310301 PMAIP1Q13794 54 aa6.09□□□□□ -1.43
VPS41-202ENST00000310301 EBI3Q14213 229 aa6.09□□□□□ -1.43
VPS41-202ENST00000310301 A0A096LNI7 61 aa6.09□□□□□ -1.44
VPS41-202ENST00000310301 MRPS36P82909 103 aaKnown RBP6.09□□□□□ -1.44
VPS41-202ENST00000310301 C1orf158Q8N1D5 194 aa6.09□□□□□ -1.44
VPS41-202ENST00000310301 SPATA3Q8NHX4 192 aa6.09□□□□□ -1.44
VPS41-202ENST00000310301 SOSTDC1Q6X4U4 206 aa6.08□□□□□ -1.44
VPS41-202ENST00000310301 LRCOL1A6NCL2 159 aa6.08□□□□□ -1.44
VPS41-202ENST00000310301 LYRM9A8MSI8 78 aa6.08□□□□□ -1.44
VPS41-202ENST00000310301 NHLRC4P0CG21 123 aaPredicted RBP6.08□□□□□ -1.44
VPS41-202ENST00000310301 BRWD1-AS2P59051 145 aa6.08□□□□□ -1.44
VPS41-202ENST00000310301 C6orf99Q4VX62 202 aa6.08□□□□□ -1.44
VPS41-202ENST00000310301 Q6JHZ5 121 aa6.08□□□□□ -1.44
VPS41-202ENST00000310301 ZNF702PQ9H963 129 aa6.08□□□□□ -1.44
VPS41-202ENST00000310301 FAM30AQ9NZY2 134 aa6.08□□□□□ -1.44
VPS41-202ENST00000310301 DOPEY1Q5JWR5 2465 aa6.08□□□□□ -1.44
VPS41-202ENST00000310301 FAM19A5Q7Z5A7 132 aaPredicted RBP6.08□□□□□ -1.44
VPS41-202ENST00000310301 DCANP1Q8TF63 244 aa6.08□□□□□ -1.44
VPS41-202ENST00000310301 RETNQ9HD89 108 aa6.08□□□□□ -1.44
VPS41-202ENST00000310301 MIFP14174 115 aa6.08□□□□□ -1.44
VPS41-202ENST00000310301 REG3AQ06141 175 aa6.08□□□□□ -1.44
VPS41-202ENST00000310301 Q6ZS46 218 aa6.07□□□□□ -1.44
VPS41-202ENST00000310301 PRO0255Q9UI72 69 aa6.07□□□□□ -1.44
VPS41-202ENST00000310301 Q6ZPA2 131 aa6.07□□□□□ -1.44
VPS41-202ENST00000310301 SHANK1Q9Y566 2161 aa6.07□□□□□ -1.44
VPS41-202ENST00000310301 DEFB135Q30KP9 77 aa6.07□□□□□ -1.44
VPS41-202ENST00000310301 CHCHD10Q8WYQ3 142 aaPredicted RBP6.07□□□□□ -1.44
VPS41-202ENST00000310301 CCDC140Q96MF4 163 aa6.07□□□□□ -1.44
VPS41-202ENST00000310301 TRBV6-5A0A0K0K1A5 114 aa6.07□□□□□ -1.44
VPS41-202ENST00000310301 Q6ZTI0 123 aa6.07□□□□□ -1.44
VPS41-202ENST00000310301 WFDC13Q8IUB5 93 aa6.07□□□□□ -1.44
VPS41-202ENST00000310301 LINC00526Q96FQ7 95 aa6.07□□□□□ -1.44
VPS41-202ENST00000310301 NOTCH3Q9UM47 2321 aa6.06□□□□□ -1.44
VPS41-202ENST00000310301 C11orf45Q8TAV5 145 aa6.06□□□□□ -1.44
VPS41-202ENST00000310301 MAP6D1Q9H9H5 199 aa6.06□□□□□ -1.44
VPS41-202ENST00000310301 IGKV2-24A0A0C4DH68 120 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms