RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 K7ERU9 68 aa6.73□□□□□ -1.33
PRDM9-201ENST00000296682 SH2D6Q7Z4S9 175 aa6.73□□□□□ -1.33
PRDM9-201ENST00000296682 SLC25A29Q8N8R3 303 aa6.73□□□□□ -1.33
PRDM9-201ENST00000296682 IGLV4-69A0A075B6H9 119 aa6.73□□□□□ -1.33
PRDM9-201ENST00000296682 TMEM238C9JI98 176 aa6.73□□□□□ -1.33
PRDM9-201ENST00000296682 DEFB135Q30KP9 77 aa6.73□□□□□ -1.33
PRDM9-201ENST00000296682 IGLL5B9A064 214 aa6.72□□□□□ -1.33
PRDM9-201ENST00000296682 RHODO00212 210 aa6.72□□□□□ -1.33
PRDM9-201ENST00000296682 RNASE1P07998 156 aaKnown RBP6.72□□□□□ -1.33
PRDM9-201ENST00000296682 TIMM17AQ99595 171 aa6.72□□□□□ -1.33
PRDM9-201ENST00000296682 TENM1Q9UKZ4 2725 aa6.72□□□□□ -1.33
PRDM9-201ENST00000296682 WFDC2Q14508 124 aa6.72□□□□□ -1.33
PRDM9-201ENST00000296682 RHOHQ15669 191 aa6.72□□□□□ -1.33
PRDM9-201ENST00000296682 OCIAD2Q56VL3 154 aa6.72□□□□□ -1.33
PRDM9-201ENST00000296682 K7EP34 96 aa6.72□□□□□ -1.33
PRDM9-201ENST00000296682 HILS1P60008 231 aa6.72□□□□□ -1.33
PRDM9-201ENST00000296682 CLUHP3Q96NS8 147 aa6.72□□□□□ -1.33
PRDM9-201ENST00000296682 NDUFA12Q9UI09 145 aa6.72□□□□□ -1.33
PRDM9-201ENST00000296682 NSD1Q96L73 2696 aaPredicted RBP6.71□□□□□ -1.33
PRDM9-201ENST00000296682 TRBV7-3A0A075B6L6 115 aa6.71□□□□□ -1.33
PRDM9-201ENST00000296682 ZNF22P17026 224 aaPredicted RBP6.71□□□□□ -1.33
PRDM9-201ENST00000296682 PIK3CD-AS1Q5SR53 167 aa6.71□□□□□ -1.33
PRDM9-201ENST00000296682 OR5A1Q8NGJ0 315 aa6.71□□□□□ -1.33
PRDM9-201ENST00000296682 CDKN2A-AS1Q9UH64 79 aa6.71□□□□□ -1.33
PRDM9-201ENST00000296682 LINC00694P0DN24 101 aa6.71□□□□□ -1.34
PRDM9-201ENST00000296682 PDZD2O15018 2839 aa6.71□□□□□ -1.34
PRDM9-201ENST00000296682 A4D1N5 150 aa6.71□□□□□ -1.34
PRDM9-201ENST00000296682 IGHV3-30-3P0DP02 117 aa6.71□□□□□ -1.34
PRDM9-201ENST00000296682 KRTAP1-1Q07627 177 aa6.71□□□□□ -1.34
PRDM9-201ENST00000296682 MUSTN1Q8IVN3 82 aa6.71□□□□□ -1.34
PRDM9-201ENST00000296682 SPATA3Q8NHX4 192 aa6.71□□□□□ -1.34
PRDM9-201ENST00000296682 TRBV6-5A0A0K0K1A5 114 aa6.7□□□□□ -1.34
PRDM9-201ENST00000296682 C11orf72Q8NBR9 251 aa6.7□□□□□ -1.34
PRDM9-201ENST00000296682 TMEM101Q96IK0 257 aa6.7□□□□□ -1.34
PRDM9-201ENST00000296682 TMEM263Q8WUH6 116 aaKnown RBP6.69□□□□□ -1.34
PRDM9-201ENST00000296682 C1QTNF4Q9BXJ3 329 aa6.69□□□□□ -1.34
PRDM9-201ENST00000296682 K7EQD1 137 aa6.69□□□□□ -1.34
PRDM9-201ENST00000296682 C5orf38Q86SI9 138 aa6.69□□□□□ -1.34
PRDM9-201ENST00000296682 TRAV25A0A0B4J276 109 aa6.68□□□□□ -1.34
PRDM9-201ENST00000296682 PRIMA1Q86XR5 153 aa6.68□□□□□ -1.34
PRDM9-201ENST00000296682 TM2D2Q9BX73 214 aa6.68□□□□□ -1.34
PRDM9-201ENST00000296682 TEX48A0A1B0GUV7 120 aa6.68□□□□□ -1.34
PRDM9-201ENST00000296682 IGLV10-54A0A075B6I4 117 aa6.68□□□□□ -1.34
PRDM9-201ENST00000296682 Q9H8V8 135 aa6.68□□□□□ -1.34
PRDM9-201ENST00000296682 IGLV1-51P01701 117 aa6.67□□□□□ -1.34
PRDM9-201ENST00000296682 UFSP1Q6NVU6 142 aa6.67□□□□□ -1.34
PRDM9-201ENST00000296682 TMEM243Q9BU79 118 aa6.67□□□□□ -1.34
PRDM9-201ENST00000296682 ANK3Q12955 4377 aaKnown RBP6.67□□□□□ -1.34
PRDM9-201ENST00000296682 GYPEP15421 78 aa6.67□□□□□ -1.34
PRDM9-201ENST00000296682 PFN2P35080 140 aa6.67□□□□□ -1.34
PRDM9-201ENST00000296682 ERG28Q9UKR5 140 aa6.67□□□□□ -1.34
PRDM9-201ENST00000296682 TMEM223A0PJW6 202 aa6.66□□□□□ -1.34
PRDM9-201ENST00000296682 F5H768 121 aa6.66□□□□□ -1.34
PRDM9-201ENST00000296682 KRTAP10-3P60369 221 aa6.66□□□□□ -1.34
PRDM9-201ENST00000296682 COX6A2Q02221 97 aa6.66□□□□□ -1.34
PRDM9-201ENST00000296682 CHCHD7Q9BUK0 85 aa6.66□□□□□ -1.34
PRDM9-201ENST00000296682 UBE2D4Q9Y2X8 147 aa6.66□□□□□ -1.34
PRDM9-201ENST00000296682 LEPROTO15243 131 aa6.66□□□□□ -1.34
PRDM9-201ENST00000296682 RS1O15537 224 aa6.66□□□□□ -1.34
PRDM9-201ENST00000296682 FHL3Q13643 280 aa6.66□□□□□ -1.34
PRDM9-201ENST00000296682 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.66□□□□□ -1.34
PRDM9-201ENST00000296682 XCL1P47992 114 aa6.66□□□□□ -1.34
PRDM9-201ENST00000296682 TAL2Q16559 108 aa6.66□□□□□ -1.34
PRDM9-201ENST00000296682 C16orf74Q96GX8 76 aa6.65□□□□□ -1.34
PRDM9-201ENST00000296682 PRO1854Q9UHT4 67 aa6.65□□□□□ -1.34
PRDM9-201ENST00000296682 A0A0J9YXY3 114 aa6.65□□□□□ -1.34
PRDM9-201ENST00000296682 CIRBPQ14011 172 aaKnown RBP6.65□□□□□ -1.34
PRDM9-201ENST00000296682 NFE4Q86UQ8 179 aa6.65□□□□□ -1.34
PRDM9-201ENST00000296682 C10orf126Q8N4M7 172 aa6.65□□□□□ -1.34
PRDM9-201ENST00000296682 OXLD1Q5BKU9 147 aa6.65□□□□□ -1.35
PRDM9-201ENST00000296682 FAM222AQ5U5X8 452 aa6.65□□□□□ -1.35
PRDM9-201ENST00000296682 A0A1B0GV72 72 aa6.64□□□□□ -1.35
PRDM9-201ENST00000296682 CFC1BP0CG36 223 aa6.64□□□□□ -1.35
PRDM9-201ENST00000296682 CFC1P0CG37 223 aa6.64□□□□□ -1.35
PRDM9-201ENST00000296682 SPANXA1Q9NS26 97 aa6.64□□□□□ -1.35
PRDM9-201ENST00000296682 C9JAW5 83 aa6.64□□□□□ -1.35
PRDM9-201ENST00000296682 TSPAN13O95857 204 aa6.64□□□□□ -1.35
PRDM9-201ENST00000296682 CMC4P56277 68 aaPredicted RBP6.64□□□□□ -1.35
PRDM9-201ENST00000296682 LINC00158P58513 81 aa6.64□□□□□ -1.35
PRDM9-201ENST00000296682 NTM-AS1Q6ZSK4 140 aa6.64□□□□□ -1.35
PRDM9-201ENST00000296682 NDUFA11Q86Y39 141 aa6.64□□□□□ -1.35
PRDM9-201ENST00000296682 GTSF1LQ9H1H1 148 aa6.64□□□□□ -1.35
PRDM9-201ENST00000296682 TRAV4A0A0B4J268 109 aa6.63□□□□□ -1.35
PRDM9-201ENST00000296682 IGHV1-58A0A0C4DH39 117 aa6.63□□□□□ -1.35
PRDM9-201ENST00000296682 ADAMTSL4-AS1Q5T5F5 129 aa6.63□□□□□ -1.35
PRDM9-201ENST00000296682 OR13C6PQ8NH95 151 aa6.63□□□□□ -1.35
PRDM9-201ENST00000296682 VSIG2Q96IQ7 327 aa6.63□□□□□ -1.35
PRDM9-201ENST00000296682 FAM110AQ9BQ89 295 aa6.63□□□□□ -1.35
PRDM9-201ENST00000296682 PAX4O43316 350 aa6.63□□□□□ -1.35
PRDM9-201ENST00000296682 GIG44P09565 113 aaPredicted RBP6.63□□□□□ -1.35
PRDM9-201ENST00000296682 PRB2P02812 416 aaPredicted RBP6.63□□□□□ -1.35
PRDM9-201ENST00000296682 DAD1P61803 113 aa6.63□□□□□ -1.35
PRDM9-201ENST00000296682 IL17DQ8TAD2 202 aa6.63□□□□□ -1.35
PRDM9-201ENST00000296682 DNAJC30Q96LL9 226 aa6.63□□□□□ -1.35
PRDM9-201ENST00000296682 J3QR89 54 aa6.62□□□□□ -1.35
PRDM9-201ENST00000296682 IGHV3-30P01768 117 aa6.62□□□□□ -1.35
PRDM9-201ENST00000296682 IGHV3-30-5P0DP03 117 aa6.62□□□□□ -1.35
PRDM9-201ENST00000296682 INSL3P51460 131 aa6.62□□□□□ -1.35
PRDM9-201ENST00000296682 DAZ2Q13117 558 aaKnown RBP6.62□□□□□ -1.35
PRDM9-201ENST00000296682 C6orf226Q5I0X4 101 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms