RNA–Protein interactions for RNA: ENST00000288602.10

BRAF-201, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAF, Length 2,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-201ENST00000288602 LGALS3P17931 250 aaKnown RBP13.73□□□□□ -0.21
BRAF-201ENST00000288602 RPL36AP83881 106 aaKnown RBP13.73□□□□□ -0.21
BRAF-201ENST00000288602 SAMD5Q5TGI4 173 aa13.73□□□□□ -0.21
BRAF-201ENST00000288602 RPL36ALQ969Q0 106 aaKnown RBP13.73□□□□□ -0.21
BRAF-201ENST00000288602 TRAV8-3A0A0A6YYJ7 113 aa13.73□□□□□ -0.21
BRAF-201ENST00000288602 FABP2P12104 132 aa13.73□□□□□ -0.21
BRAF-201ENST00000288602 NTM-AS1Q6ZSK4 140 aa13.73□□□□□ -0.21
BRAF-201ENST00000288602 SPANXA1Q9NS26 97 aa13.73□□□□□ -0.21
BRAF-201ENST00000288602 MRPS36P82909 103 aaKnown RBP13.72□□□□□ -0.21
BRAF-201ENST00000288602 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.72□□□□□ -0.21
BRAF-201ENST00000288602 CRLF1O75462 422 aa13.71□□□□□ -0.21
BRAF-201ENST00000288602 LEPROTO15243 131 aa13.71□□□□□ -0.21
BRAF-201ENST00000288602 FLNBO75369 2602 aaKnown RBP13.71□□□□□ -0.22
BRAF-201ENST00000288602 A8MZ25 164 aa13.7□□□□□ -0.22
BRAF-201ENST00000288602 UBE2D3P61077 147 aa13.7□□□□□ -0.22
BRAF-201ENST00000288602 UBE2D2P62837 147 aa13.7□□□□□ -0.22
BRAF-201ENST00000288602 RPL24P83731 157 aaKnown RBP13.7□□□□□ -0.22
BRAF-201ENST00000288602 DGAT2L7PQ6IED9 249 aa13.7□□□□□ -0.22
BRAF-201ENST00000288602 OVOL2Q9BRP0 275 aa13.7□□□□□ -0.22
BRAF-201ENST00000288602 TRBV10-1A0A0K0K1A3 114 aa13.69□□□□□ -0.22
BRAF-201ENST00000288602 TRGV4A0A0C4DH28 118 aa13.68□□□□□ -0.22
BRAF-201ENST00000288602 IGHV3-30-3P0DP02 117 aa13.68□□□□□ -0.22
BRAF-201ENST00000288602 DEFB130BP0DP73 79 aa13.68□□□□□ -0.22
BRAF-201ENST00000288602 DEFB130AP0DP74 79 aa13.68□□□□□ -0.22
BRAF-201ENST00000288602 IGLL5B9A064 214 aa13.68□□□□□ -0.22
BRAF-201ENST00000288602 SPINK8P0C7L1 97 aa13.68□□□□□ -0.22
BRAF-201ENST00000288602 CRYBA4P53673 196 aa13.68□□□□□ -0.22
BRAF-201ENST00000288602 TIMM21Q9BVV7 248 aa13.68□□□□□ -0.22
BRAF-201ENST00000288602 C9orf66Q5T8R8 295 aa13.67□□□□□ -0.22
BRAF-201ENST00000288602 DAZ4Q86SG3 579 aaKnown RBP13.67□□□□□ -0.22
BRAF-201ENST00000288602 DAZ3Q9NR90 486 aaKnown RBP13.67□□□□□ -0.22
BRAF-201ENST00000288602 TEX48A0A1B0GUV7 120 aa13.66□□□□□ -0.22
BRAF-201ENST00000288602 TINCRA0A1B0GVN0 87 aa13.66□□□□□ -0.22
BRAF-201ENST00000288602 F8P00451 2351 aa13.66□□□□□ -0.22
BRAF-201ENST00000288602 UBE2D1P51668 147 aa13.66□□□□□ -0.22
BRAF-201ENST00000288602 C10orf126Q8N4M7 172 aa13.66□□□□□ -0.22
BRAF-201ENST00000288602 COX6A2Q02221 97 aa13.65□□□□□ -0.22
BRAF-201ENST00000288602 IGHV3-30P01768 117 aa13.65□□□□□ -0.22
BRAF-201ENST00000288602 IGHV3-30-5P0DP03 117 aa13.65□□□□□ -0.22
BRAF-201ENST00000288602 FHL2Q14192 279 aa13.65□□□□□ -0.22
BRAF-201ENST00000288602 CITED1Q99966 193 aa13.65□□□□□ -0.22
BRAF-201ENST00000288602 GEMIN7Q9H840 131 aaKnown RBP13.65□□□□□ -0.22
BRAF-201ENST00000288602 APOMO95445 188 aa13.64□□□□□ -0.23
BRAF-201ENST00000288602 INSL3P51460 131 aa13.64□□□□□ -0.23
BRAF-201ENST00000288602 CDKN2A-AS1Q9UH64 79 aa13.64□□□□□ -0.23
BRAF-201ENST00000288602 A0A1B0GWB2 263 aa13.63□□□□□ -0.23
BRAF-201ENST00000288602 IGHV1-58A0A0C4DH39 117 aa13.63□□□□□ -0.23
BRAF-201ENST00000288602 TRBV6-4A0A1B0GX49 114 aa13.63□□□□□ -0.23
BRAF-201ENST00000288602 X6R8D5 127 aa13.63□□□□□ -0.23
BRAF-201ENST00000288602 TRAV13-1A0A0B4J241 112 aa13.62□□□□□ -0.23
BRAF-201ENST00000288602 DEFB4AO15263 64 aa13.62□□□□□ -0.23
BRAF-201ENST00000288602 SFTA2Q6UW10 78 aa13.62□□□□□ -0.23
BRAF-201ENST00000288602 SBSPONQ8IVN8 264 aa13.62□□□□□ -0.23
BRAF-201ENST00000288602 SPANXB1Q9NS25 103 aaPredicted RBP13.62□□□□□ -0.23
BRAF-201ENST00000288602 VSIG2Q96IQ7 327 aa13.61□□□□□ -0.23
BRAF-201ENST00000288602 PGPEP1Q9NXJ5 209 aa13.61□□□□□ -0.23
BRAF-201ENST00000288602 TMEM238LA0A1B0GVL6 79 aa13.61□□□□□ -0.23
BRAF-201ENST00000288602 A6NJY4 79 aa13.61□□□□□ -0.23
BRAF-201ENST00000288602 DEFB135Q30KP9 77 aa13.61□□□□□ -0.23
BRAF-201ENST00000288602 A0A0J9YXY3 114 aa13.6□□□□□ -0.23
BRAF-201ENST00000288602 UBE2L6O14933 153 aa13.59□□□□□ -0.23
BRAF-201ENST00000288602 LINC00242Q5T6M2 205 aa13.59□□□□□ -0.23
BRAF-201ENST00000288602 GTSF1LQ9H1H1 148 aa13.59□□□□□ -0.23
BRAF-201ENST00000288602 TMEM243Q9BU79 118 aa13.58□□□□□ -0.23
BRAF-201ENST00000288602 CDC42SE2Q9NRR3 84 aa13.58□□□□□ -0.23
BRAF-201ENST00000288602 NDUFA12Q9UI09 145 aa13.58□□□□□ -0.23
BRAF-201ENST00000288602 CFC1BP0CG36 223 aa13.57□□□□□ -0.24
BRAF-201ENST00000288602 CFC1P0CG37 223 aa13.57□□□□□ -0.24
BRAF-201ENST00000288602 WFDC2Q14508 124 aa13.57□□□□□ -0.24
BRAF-201ENST00000288602 GAGE6Q13070 117 aa13.57□□□□□ -0.24
BRAF-201ENST00000288602 MUSTN1Q8IVN3 82 aa13.57□□□□□ -0.24
BRAF-201ENST00000288602 CIDEAO60543 219 aa13.56□□□□□ -0.24
BRAF-201ENST00000288602 TMEM101Q96IK0 257 aa13.56□□□□□ -0.24
BRAF-201ENST00000288602 TIRAPP58753 221 aa13.56□□□□□ -0.24
BRAF-201ENST00000288602 KIR2DL5BQ8NHK3 375 aa13.56□□□□□ -0.24
BRAF-201ENST00000288602 CSDC2Q9Y534 153 aaKnown RBP13.56□□□□□ -0.24
BRAF-201ENST00000288602 A4D1N5 150 aa13.55□□□□□ -0.24
BRAF-201ENST00000288602 H3BMG7 143 aa13.55□□□□□ -0.24
BRAF-201ENST00000288602 TSPAN13O95857 204 aa13.55□□□□□ -0.24
BRAF-201ENST00000288602 SMAGPQ0VAQ4 97 aa13.55□□□□□ -0.24
BRAF-201ENST00000288602 ADAMTSL4-AS1Q5T5F5 129 aa13.55□□□□□ -0.24
BRAF-201ENST00000288602 IGKV3OR2-268A0A0C4DH90 116 aa13.55□□□□□ -0.24
BRAF-201ENST00000288602 FAM222AQ5U5X8 452 aa13.55□□□□□ -0.24
BRAF-201ENST00000288602 SIGMAR1Q99720 223 aa13.55□□□□□ -0.24
BRAF-201ENST00000288602 IGLV5-45A0A087WSX0 123 aa13.54□□□□□ -0.24
BRAF-201ENST00000288602 NPC2P61916 151 aa13.54□□□□□ -0.24
BRAF-201ENST00000288602 MTURNQ8N3F0 131 aa13.54□□□□□ -0.24
BRAF-201ENST00000288602 LITAFQ99732 161 aa13.54□□□□□ -0.24
BRAF-201ENST00000288602 A0A096LPF7 62 aa13.53□□□□□ -0.24
BRAF-201ENST00000288602 EIF4EBP3O60516 100 aaPredicted RBP13.53□□□□□ -0.24
BRAF-201ENST00000288602 HERVK_113P63121 156 aa13.53□□□□□ -0.24
BRAF-201ENST00000288602 SH2D6Q7Z4S9 175 aa13.53□□□□□ -0.24
BRAF-201ENST00000288602 TRBV6-8A0A0A6YYG3 113 aa13.53□□□□□ -0.24
BRAF-201ENST00000288602 PRSS2P07478 247 aa13.53□□□□□ -0.24
BRAF-201ENST00000288602 GYPEP15421 78 aa13.53□□□□□ -0.24
BRAF-201ENST00000288602 LINC00612Q8N6U2 182 aa13.53□□□□□ -0.24
BRAF-201ENST00000288602 IGLV4-60A0A075B6I1 120 aa13.52□□□□□ -0.24
BRAF-201ENST00000288602 CHCHD5Q9BSY4 110 aa13.52□□□□□ -0.24
BRAF-201ENST00000288602 LOC107984156A0A0G2JMH3 177 aa13.52□□□□□ -0.25
BRAF-201ENST00000288602 F8W1H4 67 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms