RNA–Protein interactions for RNA: ENST00000245908.10

SH2D3A-201, Transcript of SH2 domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2D3A, Length 2,296 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-201ENST00000245908 CFAP161Q6P656 301 aa15.61■□□□□ 0.09
SH2D3A-201ENST00000245908 GAGE12JA6NER3 117 aa15.61■□□□□ 0.09
SH2D3A-201ENST00000245908 GAGE7O76087 117 aa15.61■□□□□ 0.09
SH2D3A-201ENST00000245908 GAGE12FP0CL80 117 aa15.61■□□□□ 0.09
SH2D3A-201ENST00000245908 GAGE12GP0CL81 117 aa15.61■□□□□ 0.09
SH2D3A-201ENST00000245908 GAGE12IP0CL82 117 aa15.61■□□□□ 0.09
SH2D3A-201ENST00000245908 GAGE4Q13068 117 aa15.61■□□□□ 0.09
SH2D3A-201ENST00000245908 IL17DQ8TAD2 202 aa15.61■□□□□ 0.09
SH2D3A-201ENST00000245908 LINC01600Q96MT4 127 aa15.61■□□□□ 0.09
SH2D3A-201ENST00000245908 AKAP9Q99996 3911 aa15.61■□□□□ 0.09
SH2D3A-201ENST00000245908 C9JAW5 83 aa15.6■□□□□ 0.09
SH2D3A-201ENST00000245908 STHQ8IWL8 128 aa15.6■□□□□ 0.09
SH2D3A-201ENST00000245908 VSIG2Q96IQ7 327 aa15.6■□□□□ 0.09
SH2D3A-201ENST00000245908 MYO9AB2RTY4 2548 aa15.6■□□□□ 0.09
SH2D3A-201ENST00000245908 ADARB2-AS1A8MUL3 147 aa15.6■□□□□ 0.09
SH2D3A-201ENST00000245908 C1orf158Q8N1D5 194 aa15.6■□□□□ 0.09
SH2D3A-201ENST00000245908 NDUFA12Q9UI09 145 aa15.59■□□□□ 0.09
SH2D3A-201ENST00000245908 IFITM1P13164 125 aa15.58■□□□□ 0.08
SH2D3A-201ENST00000245908 FAM110AQ9BQ89 295 aa15.58■□□□□ 0.08
SH2D3A-201ENST00000245908 TRAV4A0A0B4J268 109 aa15.57■□□□□ 0.08
SH2D3A-201ENST00000245908 SPANXDQ9BXN6 97 aa15.57■□□□□ 0.08
SH2D3A-201ENST00000245908 SPANXCQ9NY87 97 aa15.57■□□□□ 0.08
SH2D3A-201ENST00000245908 TTC32Q5I0X7 151 aa15.57■□□□□ 0.08
SH2D3A-201ENST00000245908 CCL24O00175 119 aa15.56■□□□□ 0.08
SH2D3A-201ENST00000245908 A0A1W2PRX2 142 aa15.56■□□□□ 0.08
SH2D3A-201ENST00000245908 RPL13AP40429 203 aaKnown RBP15.55■□□□□ 0.08
SH2D3A-201ENST00000245908 C11orf44Q8N8P7 122 aa15.55■□□□□ 0.08
SH2D3A-201ENST00000245908 WFDC11Q8NEX6 87 aa15.55■□□□□ 0.08
SH2D3A-201ENST00000245908 ESM1Q9NQ30 184 aa15.55■□□□□ 0.08
SH2D3A-201ENST00000245908 IGHV3OR16-12A0A075B7B8 117 aa15.55■□□□□ 0.08
SH2D3A-201ENST00000245908 CRLF1O75462 422 aa15.55■□□□□ 0.08
SH2D3A-201ENST00000245908 TIRAPP58753 221 aa15.55■□□□□ 0.08
SH2D3A-201ENST00000245908 IGLV5-45A0A087WSX0 123 aa15.54■□□□□ 0.08
SH2D3A-201ENST00000245908 TRGV1A0A0A0MS02 117 aa15.54■□□□□ 0.08
SH2D3A-201ENST00000245908 CCDC179H3BU77 68 aa15.54■□□□□ 0.08
SH2D3A-201ENST00000245908 ZNF469Q96JG9 3925 aaPredicted RBP15.54■□□□□ 0.08
SH2D3A-201ENST00000245908 ATXN8Q156A1 80 aa15.54■□□□□ 0.08
SH2D3A-201ENST00000245908 ADAMTSL4-AS1Q5T5F5 129 aa15.54■□□□□ 0.08
SH2D3A-201ENST00000245908 NTN5Q8WTR8 489 aaPredicted RBP15.54■□□□□ 0.08
SH2D3A-201ENST00000245908 APCP25054 2843 aa15.53■□□□□ 0.08
SH2D3A-201ENST00000245908 A8MZ25 164 aa15.53■□□□□ 0.08
SH2D3A-201ENST00000245908 H7C2G1 150 aa15.52■□□□□ 0.08
SH2D3A-201ENST00000245908 MIAQ16674 131 aa15.52■□□□□ 0.08
SH2D3A-201ENST00000245908 CDKN2A-AS1Q9UH64 79 aa15.52■□□□□ 0.07
SH2D3A-201ENST00000245908 LINC01620Q4KN68 170 aa15.51■□□□□ 0.07
SH2D3A-201ENST00000245908 DGAT2L7PQ6IED9 249 aa15.51■□□□□ 0.07
SH2D3A-201ENST00000245908 TRAV8-4A0A0B4J246 113 aa15.51■□□□□ 0.07
SH2D3A-201ENST00000245908 ITPR3Q14573 2671 aa15.5■□□□□ 0.07
SH2D3A-201ENST00000245908 TRBV10-1A0A0K0K1A3 114 aa15.5■□□□□ 0.07
SH2D3A-201ENST00000245908 TIMM17BO60830 172 aa15.5■□□□□ 0.07
SH2D3A-201ENST00000245908 PRSS2P07478 247 aa15.5■□□□□ 0.07
SH2D3A-201ENST00000245908 Q1RN00 199 aa15.5■□□□□ 0.07
SH2D3A-201ENST00000245908 CHD6Q8TD26 2715 aa15.5■□□□□ 0.07
SH2D3A-201ENST00000245908 K7EQD1 137 aa15.5■□□□□ 0.07
SH2D3A-201ENST00000245908 CITED2Q99967 270 aaPredicted RBP15.5■□□□□ 0.07
SH2D3A-201ENST00000245908 Q6ZTI0 123 aa15.49■□□□□ 0.07
SH2D3A-201ENST00000245908 TRBV30A0A0K0K1B3 111 aa15.48■□□□□ 0.07
SH2D3A-201ENST00000245908 TRBV10-2A0A0K0K1G8 114 aa15.48■□□□□ 0.07
SH2D3A-201ENST00000245908 RPL36AP83881 106 aaKnown RBP15.48■□□□□ 0.07
SH2D3A-201ENST00000245908 MRPL23Q16540 153 aaKnown RBP15.48■□□□□ 0.07
SH2D3A-201ENST00000245908 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.48■□□□□ 0.07
SH2D3A-201ENST00000245908 RPL36ALQ969Q0 106 aaKnown RBP15.48■□□□□ 0.07
SH2D3A-201ENST00000245908 TMEM101Q96IK0 257 aa15.48■□□□□ 0.07
SH2D3A-201ENST00000245908 TLN2Q9Y4G6 2542 aa15.48■□□□□ 0.07
SH2D3A-201ENST00000245908 NDUFA1O15239 70 aa15.47■□□□□ 0.07
SH2D3A-201ENST00000245908 FAM19A3Q7Z5A8 133 aa15.47■□□□□ 0.07
SH2D3A-201ENST00000245908 C15orf53Q8NAA6 179 aa15.47■□□□□ 0.07
SH2D3A-201ENST00000245908 DAZ2Q13117 558 aaKnown RBP15.47■□□□□ 0.07
SH2D3A-201ENST00000245908 DAZ4Q86SG3 579 aaKnown RBP15.47■□□□□ 0.07
SH2D3A-201ENST00000245908 DAZ3Q9NR90 486 aaKnown RBP15.47■□□□□ 0.07
SH2D3A-201ENST00000245908 YAE1D1Q9NRH1 226 aa15.47■□□□□ 0.07
SH2D3A-201ENST00000245908 EPG5Q9HCE0 2579 aa15.47■□□□□ 0.07
SH2D3A-201ENST00000245908 LINC00694P0DN24 101 aa15.46■□□□□ 0.07
SH2D3A-201ENST00000245908 HERVK_113P63121 156 aa15.46■□□□□ 0.07
SH2D3A-201ENST00000245908 HERV-K104P63124 156 aa15.46■□□□□ 0.07
SH2D3A-201ENST00000245908 COX6A2Q02221 97 aa15.46■□□□□ 0.07
SH2D3A-201ENST00000245908 CSDC2Q9Y534 153 aaKnown RBP15.46■□□□□ 0.07
SH2D3A-201ENST00000245908 CMC4P56277 68 aaPredicted RBP15.46■□□□□ 0.06
SH2D3A-201ENST00000245908 LINC00242Q5T6M2 205 aa15.46■□□□□ 0.06
SH2D3A-201ENST00000245908 SHISA2Q6UWI4 295 aa15.46■□□□□ 0.06
SH2D3A-201ENST00000245908 UBE2WQ96B02 151 aa15.46■□□□□ 0.06
SH2D3A-201ENST00000245908 TEX49A0A1B0GTD5 131 aa15.45■□□□□ 0.06
SH2D3A-201ENST00000245908 TRIAP1O43715 76 aa15.45■□□□□ 0.06
SH2D3A-201ENST00000245908 NTM-AS1Q6ZSK4 140 aa15.45■□□□□ 0.06
SH2D3A-201ENST00000245908 IGLV5-39A0A0G2JS06 123 aa15.45■□□□□ 0.06
SH2D3A-201ENST00000245908 SMIM20Q8N5G0 67 aa15.45■□□□□ 0.06
SH2D3A-201ENST00000245908 GIG44P09565 113 aaPredicted RBP15.44■□□□□ 0.06
SH2D3A-201ENST00000245908 LINC01006Q8NI28 216 aa15.44■□□□□ 0.06
SH2D3A-201ENST00000245908 C16orf95Q9H693 158 aa15.44■□□□□ 0.06
SH2D3A-201ENST00000245908 SONP18583 2426 aaKnown RBP15.43■□□□□ 0.06
SH2D3A-201ENST00000245908 WNK1Q9H4A3 2382 aa15.43■□□□□ 0.06
SH2D3A-201ENST00000245908 NPC2P61916 151 aa15.42■□□□□ 0.06
SH2D3A-201ENST00000245908 KRTAP1-1Q07627 177 aa15.42■□□□□ 0.06
SH2D3A-201ENST00000245908 NOP10Q9NPE3 64 aaKnown RBP15.42■□□□□ 0.06
SH2D3A-201ENST00000245908 ICOSQ9Y6W8 199 aa15.42■□□□□ 0.06
SH2D3A-201ENST00000245908 RNASE1P07998 156 aaKnown RBP15.41■□□□□ 0.06
SH2D3A-201ENST00000245908 FAM240AA0A1B0GVK7 77 aa15.4■□□□□ 0.06
SH2D3A-201ENST00000245908 PLAC8L1A1L4L8 177 aa15.4■□□□□ 0.06
SH2D3A-201ENST00000245908 C16orf74Q96GX8 76 aa15.4■□□□□ 0.06
SH2D3A-201ENST00000245908 NBPF19A0A087WUL8 3843 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms