RNA–Protein interactions for RNA: ENST00000216294.4

SNAPC1-201, Transcript of small nuclear RNA activating complex polypeptide 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC1, Length 2,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC1-201ENST00000216294 UNC79Q9P2D8 2635 aa11.48□□□□□ -0.57
SNAPC1-201ENST00000216294 SBSPONQ8IVN8 264 aa11.47□□□□□ -0.57
SNAPC1-201ENST00000216294 Q8N2B8 174 aa11.47□□□□□ -0.57
SNAPC1-201ENST00000216294 ODF3Q96PU9 254 aa11.47□□□□□ -0.57
SNAPC1-201ENST00000216294 ANK3Q12955 4377 aaKnown RBP11.47□□□□□ -0.57
SNAPC1-201ENST00000216294 TRGV11A0A075B6L2 103 aa11.47□□□□□ -0.57
SNAPC1-201ENST00000216294 H3BMM0 161 aa11.47□□□□□ -0.57
SNAPC1-201ENST00000216294 CRLF1O75462 422 aa11.47□□□□□ -0.57
SNAPC1-201ENST00000216294 LYRM7Q5U5X0 104 aa11.47□□□□□ -0.57
SNAPC1-201ENST00000216294 RNF152Q8N8N0 203 aa11.47□□□□□ -0.57
SNAPC1-201ENST00000216294 LINC01587Q99440 93 aa11.47□□□□□ -0.57
SNAPC1-201ENST00000216294 IGHV3-53P01767 116 aa11.46□□□□□ -0.57
SNAPC1-201ENST00000216294 XCL2Q9UBD3 114 aa11.46□□□□□ -0.57
SNAPC1-201ENST00000216294 COX6A2Q02221 97 aa11.46□□□□□ -0.58
SNAPC1-201ENST00000216294 KRTAP1-1Q07627 177 aa11.46□□□□□ -0.58
SNAPC1-201ENST00000216294 CDKN2A-AS1Q9UH64 79 aa11.46□□□□□ -0.58
SNAPC1-201ENST00000216294 DNAJC9-AS1A6NH13 148 aa11.45□□□□□ -0.58
SNAPC1-201ENST00000216294 UBE2D4Q9Y2X8 147 aa11.45□□□□□ -0.58
SNAPC1-201ENST00000216294 MRPS36P82909 103 aaKnown RBP11.45□□□□□ -0.58
SNAPC1-201ENST00000216294 LINC01620Q4KN68 170 aa11.44□□□□□ -0.58
SNAPC1-201ENST00000216294 RNF183Q96D59 192 aa11.44□□□□□ -0.58
SNAPC1-201ENST00000216294 ESM1Q9NQ30 184 aa11.44□□□□□ -0.58
SNAPC1-201ENST00000216294 A0A0B4J2C4 111 aa11.43□□□□□ -0.58
SNAPC1-201ENST00000216294 IGHV1-58A0A0C4DH39 117 aa11.43□□□□□ -0.58
SNAPC1-201ENST00000216294 VSIG2Q96IQ7 327 aa11.43□□□□□ -0.58
SNAPC1-201ENST00000216294 A0A1W2PRX2 142 aa11.43□□□□□ -0.58
SNAPC1-201ENST00000216294 YAE1D1Q9NRH1 226 aa11.43□□□□□ -0.58
SNAPC1-201ENST00000216294 LINC00694P0DN24 101 aa11.43□□□□□ -0.58
SNAPC1-201ENST00000216294 TRAV4A0A0B4J268 109 aa11.42□□□□□ -0.58
SNAPC1-201ENST00000216294 MAP6D1Q9H9H5 199 aa11.42□□□□□ -0.58
SNAPC1-201ENST00000216294 TMEM86BQ8N661 226 aa11.41□□□□□ -0.58
SNAPC1-201ENST00000216294 ICOSQ9Y6W8 199 aa11.41□□□□□ -0.58
SNAPC1-201ENST00000216294 FASNP49327 2511 aaKnown RBP11.41□□□□□ -0.58
SNAPC1-201ENST00000216294 ATXN8Q156A1 80 aa11.4□□□□□ -0.58
SNAPC1-201ENST00000216294 C11orf72Q8NBR9 251 aa11.4□□□□□ -0.58
SNAPC1-201ENST00000216294 HECTD1Q9ULT8 2610 aa11.4□□□□□ -0.58
SNAPC1-201ENST00000216294 PYGO1Q9Y3Y4 419 aa11.4□□□□□ -0.59
SNAPC1-201ENST00000216294 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.39□□□□□ -0.59
SNAPC1-201ENST00000216294 TEX29Q8N6K0 151 aa11.39□□□□□ -0.59
SNAPC1-201ENST00000216294 TMEM101Q96IK0 257 aa11.39□□□□□ -0.59
SNAPC1-201ENST00000216294 H7C423 109 aa11.39□□□□□ -0.59
SNAPC1-201ENST00000216294 C4orf3Q8WVX3 66 aa11.39□□□□□ -0.59
SNAPC1-201ENST00000216294 TRAV13-1A0A0B4J241 112 aa11.38□□□□□ -0.59
SNAPC1-201ENST00000216294 RPL13AP40429 203 aaKnown RBP11.38□□□□□ -0.59
SNAPC1-201ENST00000216294 ZNF415Q09FC8 603 aa11.38□□□□□ -0.59
SNAPC1-201ENST00000216294 MIAQ16674 131 aa11.38□□□□□ -0.59
SNAPC1-201ENST00000216294 DGAT2L7PQ6IED9 249 aa11.38□□□□□ -0.59
SNAPC1-201ENST00000216294 C2orf82Q6UX34 121 aa11.38□□□□□ -0.59
SNAPC1-201ENST00000216294 DYNLRB2Q8TF09 96 aa11.38□□□□□ -0.59
SNAPC1-201ENST00000216294 TRGV1A0A0A0MS02 117 aa11.37□□□□□ -0.59
SNAPC1-201ENST00000216294 TINCRA0A1B0GVN0 87 aa11.37□□□□□ -0.59
SNAPC1-201ENST00000216294 TTC32Q5I0X7 151 aa11.36□□□□□ -0.59
SNAPC1-201ENST00000216294 SMR3AQ99954 134 aa11.36□□□□□ -0.59
SNAPC1-201ENST00000216294 TRBV30A0A0K0K1B3 111 aa11.36□□□□□ -0.59
SNAPC1-201ENST00000216294 Q9H8V8 135 aa11.36□□□□□ -0.59
SNAPC1-201ENST00000216294 WFDC10AQ9H1F0 79 aa11.35□□□□□ -0.59
SNAPC1-201ENST00000216294 VWFP04275 2813 aa11.35□□□□□ -0.59
SNAPC1-201ENST00000216294 Q6ZTI0 123 aa11.35□□□□□ -0.59
SNAPC1-201ENST00000216294 CITED2Q99967 270 aaPredicted RBP11.35□□□□□ -0.59
SNAPC1-201ENST00000216294 ANAPC13Q9BS18 74 aa11.35□□□□□ -0.59
SNAPC1-201ENST00000216294 IGKV3OR2-268A0A0C4DH90 116 aa11.34□□□□□ -0.59
SNAPC1-201ENST00000216294 TRBV10-2A0A0K0K1G8 114 aa11.34□□□□□ -0.59
SNAPC1-201ENST00000216294 ZFAND6Q6FIF0 208 aa11.34□□□□□ -0.59
SNAPC1-201ENST00000216294 SOSTDC1Q6X4U4 206 aa11.33□□□□□ -0.59
SNAPC1-201ENST00000216294 UBE2WQ96B02 151 aa11.33□□□□□ -0.59
SNAPC1-201ENST00000216294 DEFB114Q30KQ6 69 aa11.33□□□□□ -0.6
SNAPC1-201ENST00000216294 ODF3L2Q3SX64 289 aa11.33□□□□□ -0.6
SNAPC1-201ENST00000216294 LINC00242Q5T6M2 205 aa11.33□□□□□ -0.6
SNAPC1-201ENST00000216294 NTM-AS1Q6ZSK4 140 aa11.33□□□□□ -0.6
SNAPC1-201ENST00000216294 CITED1Q99966 193 aa11.33□□□□□ -0.6
SNAPC1-201ENST00000216294 SPANXDQ9BXN6 97 aa11.33□□□□□ -0.6
SNAPC1-201ENST00000216294 SPANXCQ9NY87 97 aa11.33□□□□□ -0.6
SNAPC1-201ENST00000216294 PEMTQ9UBM1 199 aa11.33□□□□□ -0.6
SNAPC1-201ENST00000216294 TRAV8-4A0A0B4J246 113 aa11.32□□□□□ -0.6
SNAPC1-201ENST00000216294 GAGE12JA6NER3 117 aa11.32□□□□□ -0.6
SNAPC1-201ENST00000216294 NHLRC4P0CG21 123 aaPredicted RBP11.32□□□□□ -0.6
SNAPC1-201ENST00000216294 GAGE4Q13068 117 aa11.32□□□□□ -0.6
SNAPC1-201ENST00000216294 GAGE5Q13069 117 aa11.32□□□□□ -0.6
SNAPC1-201ENST00000216294 C1orf158Q8N1D5 194 aa11.32□□□□□ -0.6
SNAPC1-201ENST00000216294 SPANXA1Q9NS26 97 aa11.32□□□□□ -0.6
SNAPC1-201ENST00000216294 LOC100131303A0A0U1RQF7 123 aa11.32□□□□□ -0.6
SNAPC1-201ENST00000216294 C15orf53Q8NAA6 179 aa11.32□□□□□ -0.6
SNAPC1-201ENST00000216294 SNCGO76070 127 aa11.31□□□□□ -0.6
SNAPC1-201ENST00000216294 INSP01308 110 aa11.31□□□□□ -0.6
SNAPC1-201ENST00000216294 NOTCH2Q04721 2471 aa11.31□□□□□ -0.6
SNAPC1-201ENST00000216294 PIK3CD-AS1Q5SR53 167 aa11.31□□□□□ -0.6
SNAPC1-201ENST00000216294 SS18L2Q9UHA2 77 aa11.31□□□□□ -0.6
SNAPC1-201ENST00000216294 TMEM262E9PQX1 116 aa11.3□□□□□ -0.6
SNAPC1-201ENST00000216294 RS1O15537 224 aa11.3□□□□□ -0.6
SNAPC1-201ENST00000216294 LINC01006Q8NI28 216 aa11.3□□□□□ -0.6
SNAPC1-201ENST00000216294 LINC00308Q8TCZ7 52 aa11.3□□□□□ -0.6
SNAPC1-201ENST00000216294 RNASE1P07998 156 aaKnown RBP11.29□□□□□ -0.6
SNAPC1-201ENST00000216294 EDA2RQ9HAV5 297 aa11.29□□□□□ -0.6
SNAPC1-201ENST00000216294 B5MCH6 92 aa11.29□□□□□ -0.6
SNAPC1-201ENST00000216294 GAGE2BQ13066 116 aa11.29□□□□□ -0.6
SNAPC1-201ENST00000216294 GAGE2EQ4V326 116 aa11.29□□□□□ -0.6
SNAPC1-201ENST00000216294 NOP10Q9NPE3 64 aaKnown RBP11.29□□□□□ -0.6
SNAPC1-201ENST00000216294 GAGE2DQ9UEU5 116 aa11.29□□□□□ -0.6
SNAPC1-201ENST00000216294 OTOGQ6ZRI0 2925 aa11.28□□□□□ -0.6
SNAPC1-201ENST00000216294 A8MTW9 85 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms