RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 Sec11cQ9D8V7 192 aa16.62■□□□□ 0.25
Ccdc88a-202ENSMUST00000109477 Cxcl14Q9WUQ5 99 aa16.62■□□□□ 0.25
Ccdc88a-202ENSMUST00000109477 Trav4-4-dv10A0A075B651 110 aa16.62■□□□□ 0.25
Ccdc88a-202ENSMUST00000109477 1700015F17RikD3YUK8 150 aa16.62■□□□□ 0.25
Ccdc88a-202ENSMUST00000109477 Gm15293D3YX02 93 aa16.62■□□□□ 0.25
Ccdc88a-202ENSMUST00000109477 1700056E22RikF7CNM6 234 aa16.62■□□□□ 0.25
Ccdc88a-202ENSMUST00000109477 Edn2P22389 175 aa16.62■□□□□ 0.25
Ccdc88a-202ENSMUST00000109477 Rhox4fQ2MDF8 205 aa16.62■□□□□ 0.25
Ccdc88a-202ENSMUST00000109477 Rhox4cQ2MDG1 205 aa16.62■□□□□ 0.25
Ccdc88a-202ENSMUST00000109477 Slc2a9Q3T9X0 538 aa16.62■□□□□ 0.25
Ccdc88a-202ENSMUST00000109477 Olfr149Q60888 311 aa16.62■□□□□ 0.25
Ccdc88a-202ENSMUST00000109477 Tmem129Q8K304 362 aa16.62■□□□□ 0.25
Ccdc88a-202ENSMUST00000109477 Rgs13Q8K443 158 aa16.62■□□□□ 0.25
Ccdc88a-202ENSMUST00000109477 Rhox4aQ9D3I8 205 aa16.62■□□□□ 0.25
Ccdc88a-202ENSMUST00000109477 Ighv9-4A0A0A6YWH6 117 aa16.61■□□□□ 0.25
Ccdc88a-202ENSMUST00000109477 Fut9O88819 359 aa16.61■□□□□ 0.25
Ccdc88a-202ENSMUST00000109477 Sdr39u1Q5M8N4 308 aa16.61■□□□□ 0.25
Ccdc88a-202ENSMUST00000109477 Olfr43Q7TRX1 313 aa16.61■□□□□ 0.25
Ccdc88a-202ENSMUST00000109477 Rnf126Q91YL2 313 aa16.61■□□□□ 0.25
Ccdc88a-202ENSMUST00000109477 Cldn16Q925N4 235 aa16.61■□□□□ 0.25
Ccdc88a-202ENSMUST00000109477 Tmem100Q9CQG9 134 aa16.61■□□□□ 0.25
Ccdc88a-202ENSMUST00000109477 PifoQ9D9W1 207 aa16.61■□□□□ 0.25
Ccdc88a-202ENSMUST00000109477 Cyb5r3Q9DCN2 301 aaKnown RBP16.61■□□□□ 0.25
Ccdc88a-202ENSMUST00000109477 Olfr959Q9EQ86 311 aa16.61■□□□□ 0.25
Ccdc88a-202ENSMUST00000109477 Ssna1Q9JJ94 119 aa16.61■□□□□ 0.25
Ccdc88a-202ENSMUST00000109477 Usp9yF8VPU6 2556 aa16.61■□□□□ 0.25
Ccdc88a-202ENSMUST00000109477 Esp23A8R0V5 104 aa16.6■□□□□ 0.25
Ccdc88a-202ENSMUST00000109477 Gm16519F8VQK7 162 aa16.6■□□□□ 0.25
Ccdc88a-202ENSMUST00000109477 Ppt1O88531 306 aa16.6■□□□□ 0.25
Ccdc88a-202ENSMUST00000109477 Olfr113Q8VEU4 312 aa16.6■□□□□ 0.25
Ccdc88a-202ENSMUST00000109477 Ms4a6bQ99N09 244 aa16.6■□□□□ 0.25
Ccdc88a-202ENSMUST00000109477 Rhebl1Q9D8T3 184 aa16.6■□□□□ 0.25
Ccdc88a-202ENSMUST00000109477 Olfr972Q9EQA2 314 aa16.6■□□□□ 0.25
Ccdc88a-202ENSMUST00000109477 Igkv1-132A0A0B4J1H9 120 aa16.59■□□□□ 0.25
Ccdc88a-202ENSMUST00000109477 Gm21994F6T2D2 329 aa16.59■□□□□ 0.25
Ccdc88a-202ENSMUST00000109477 Gm9945Q8BNZ3 91 aa16.59■□□□□ 0.25
Ccdc88a-202ENSMUST00000109477 Ido2Q8R0V5 405 aa16.59■□□□□ 0.25
Ccdc88a-202ENSMUST00000109477 Olfr873Q8VFJ0 319 aa16.59■□□□□ 0.25
Ccdc88a-202ENSMUST00000109477 Vax2Q9WTP9 292 aa16.59■□□□□ 0.25
Ccdc88a-202ENSMUST00000109477 Pfdn5Q9WU28 154 aa16.59■□□□□ 0.25
Ccdc88a-202ENSMUST00000109477 Vsig2Q9Z109 328 aa16.59■□□□□ 0.25
Ccdc88a-202ENSMUST00000109477 Olfr1189A2AV11 306 aa16.59■□□□□ 0.25
Ccdc88a-202ENSMUST00000109477 Amn1B8JKV0 258 aa16.59■□□□□ 0.25
Ccdc88a-202ENSMUST00000109477 Gm37240E9QAY5 252 aa16.59■□□□□ 0.25
Ccdc88a-202ENSMUST00000109477 CluQ06890 448 aa16.59■□□□□ 0.25
Ccdc88a-202ENSMUST00000109477 Olfr1535Q7TQU0 326 aa16.59■□□□□ 0.25
Ccdc88a-202ENSMUST00000109477 Q8C708 225 aa16.59■□□□□ 0.25
Ccdc88a-202ENSMUST00000109477 Lrrc10Q8K3W2 274 aa16.59■□□□□ 0.25
Ccdc88a-202ENSMUST00000109477 Rnf2Q9CQJ4 336 aa16.59■□□□□ 0.25
Ccdc88a-202ENSMUST00000109477 Fbxo24Q9D417 589 aa16.59■□□□□ 0.25
Ccdc88a-202ENSMUST00000109477 Mettl26Q9DCS2 204 aa16.59■□□□□ 0.25
Ccdc88a-202ENSMUST00000109477 PigpQ9JHG1 132 aa16.59■□□□□ 0.25
Ccdc88a-202ENSMUST00000109477 Olfr1436A0PK57 315 aa16.58■□□□□ 0.24
Ccdc88a-202ENSMUST00000109477 BC030500E9Q6W0 185 aa16.58■□□□□ 0.24
Ccdc88a-202ENSMUST00000109477 SrstQ06666 185 aa16.58■□□□□ 0.24
Ccdc88a-202ENSMUST00000109477 Olfr433Q7TRV9 314 aa16.58■□□□□ 0.24
Ccdc88a-202ENSMUST00000109477 Pgam5Q8BX10 288 aa16.58■□□□□ 0.24
Ccdc88a-202ENSMUST00000109477 Olfr127Q8VF25 323 aa16.58■□□□□ 0.24
Ccdc88a-202ENSMUST00000109477 Olfr1002Q8VFK2 318 aa16.58■□□□□ 0.24
Ccdc88a-202ENSMUST00000109477 Cma2Q91VB1 246 aa16.58■□□□□ 0.24
Ccdc88a-202ENSMUST00000109477 Necap2Q9D1J1 266 aa16.58■□□□□ 0.24
Ccdc88a-202ENSMUST00000109477 ApomQ9Z1R3 190 aa16.58■□□□□ 0.24
Ccdc88a-202ENSMUST00000109477 Ighv1-67A0A0G2JFN9 117 aa16.57■□□□□ 0.24
Ccdc88a-202ENSMUST00000109477 BsgP18572 389 aaKnown RBP16.57■□□□□ 0.24
Ccdc88a-202ENSMUST00000109477 F7P70375 446 aa16.57■□□□□ 0.24
Ccdc88a-202ENSMUST00000109477 Psg19Q4KL31 475 aa16.57■□□□□ 0.24
Ccdc88a-202ENSMUST00000109477 Saxo2Q8BQB6 394 aa16.57■□□□□ 0.24
Ccdc88a-202ENSMUST00000109477 Habp2Q8K0D2 558 aa16.57■□□□□ 0.24
Ccdc88a-202ENSMUST00000109477 Glo1Q9CPU0 184 aa16.57■□□□□ 0.24
Ccdc88a-202ENSMUST00000109477 Gm5294J3QP53 216 aa16.56■□□□□ 0.24
Ccdc88a-202ENSMUST00000109477 Csn2P10598 231 aa16.56■□□□□ 0.24
Ccdc88a-202ENSMUST00000109477 Ssty1P13675 232 aa16.56■□□□□ 0.24
Ccdc88a-202ENSMUST00000109477 AmtQ8CFA2 403 aaKnown RBP16.56■□□□□ 0.24
Ccdc88a-202ENSMUST00000109477 Olfr802Q8VGJ2 312 aa16.56■□□□□ 0.24
Ccdc88a-202ENSMUST00000109477 Scgb1b27Q91WB5 92 aa16.56■□□□□ 0.24
Ccdc88a-202ENSMUST00000109477 TecrQ9CY27 308 aa16.56■□□□□ 0.24
Ccdc88a-202ENSMUST00000109477 Trbv13-3A0A0B4J1H2 113 aa16.56■□□□□ 0.24
Ccdc88a-202ENSMUST00000109477 Plcxd2B2RXA1 340 aa16.56■□□□□ 0.24
Ccdc88a-202ENSMUST00000109477 Zfp708F8VPP0 541 aa16.56■□□□□ 0.24
Ccdc88a-202ENSMUST00000109477 Pfdn2O70591 154 aa16.56■□□□□ 0.24
Ccdc88a-202ENSMUST00000109477 Slc45a2P58355 530 aa16.56■□□□□ 0.24
Ccdc88a-202ENSMUST00000109477 BlcapP62951 87 aa16.56■□□□□ 0.24
Ccdc88a-202ENSMUST00000109477 Rasl11aQ6IMB1 242 aa16.56■□□□□ 0.24
Ccdc88a-202ENSMUST00000109477 Olfr823Q7TRH2 315 aa16.56■□□□□ 0.24
Ccdc88a-202ENSMUST00000109477 Commd5Q8R395 224 aa16.56■□□□□ 0.24
Ccdc88a-202ENSMUST00000109477 Olfr824Q8VFU4 315 aa16.56■□□□□ 0.24
Ccdc88a-202ENSMUST00000109477 Gm21913J3KML9 361 aa16.55■□□□□ 0.24
Ccdc88a-202ENSMUST00000109477 Gm21776J3QPJ5 361 aa16.55■□□□□ 0.24
Ccdc88a-202ENSMUST00000109477 P01820 115 aa16.55■□□□□ 0.24
Ccdc88a-202ENSMUST00000109477 Cd74P04441 279 aa16.55■□□□□ 0.24
Ccdc88a-202ENSMUST00000109477 Cnn1Q08091 297 aaKnown RBP16.55■□□□□ 0.24
Ccdc88a-202ENSMUST00000109477 KcnrgQ2TUM3 264 aa16.55■□□□□ 0.24
Ccdc88a-202ENSMUST00000109477 ErasQ7TN89 227 aa16.55■□□□□ 0.24
Ccdc88a-202ENSMUST00000109477 Samd10Q7TST3 202 aa16.55■□□□□ 0.24
Ccdc88a-202ENSMUST00000109477 Mus81Q91ZJ0 551 aa16.55■□□□□ 0.24
Ccdc88a-202ENSMUST00000109477 Rpp25lQ99JH1 163 aa16.55■□□□□ 0.24
Ccdc88a-202ENSMUST00000109477 Olfr1326-ps1A0A140T8J7 311 aa16.54■□□□□ 0.24
Ccdc88a-202ENSMUST00000109477 Gm17727E9Q4V7 109 aa16.54■□□□□ 0.24
Ccdc88a-202ENSMUST00000109477 Sprr3O09116 238 aa16.54■□□□□ 0.24
Ccdc88a-202ENSMUST00000109477 P01748 117 aa16.54■□□□□ 0.24
Retrieved 100 of 22,080 RNA–protein pairs in 37.3 ms