RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Olfr965Q7TRA7 312 aa6.87□□□□□ -1.31
Trim39-201ENSMUST00000042717 Fam78bQ8BQN5 261 aa6.87□□□□□ -1.31
Trim39-201ENSMUST00000042717 Msrb3Q8BU85 253 aa6.87□□□□□ -1.31
Trim39-201ENSMUST00000042717 Gm10309Q8C648 119 aa6.87□□□□□ -1.31
Trim39-201ENSMUST00000042717 Rhox4aQ9D3I8 205 aa6.87□□□□□ -1.31
Trim39-201ENSMUST00000042717 Ssna1Q9JJ94 119 aa6.87□□□□□ -1.31
Trim39-201ENSMUST00000042717 Lsm4Q9QXA5 137 aaKnown RBP6.87□□□□□ -1.31
Trim39-201ENSMUST00000042717 Gm5089A1L3C8 106 aa6.87□□□□□ -1.31
Trim39-201ENSMUST00000042717 Tmem29A2ANF5 204 aa6.87□□□□□ -1.31
Trim39-201ENSMUST00000042717 Gm21994F6T2D2 329 aa6.87□□□□□ -1.31
Trim39-201ENSMUST00000042717 Myod1P10085 318 aa6.87□□□□□ -1.31
Trim39-201ENSMUST00000042717 Tmem88bQ3TYP4 173 aa6.87□□□□□ -1.31
Trim39-201ENSMUST00000042717 Ceacam12Q3UKP4 300 aa6.87□□□□□ -1.31
Trim39-201ENSMUST00000042717 Phox2aQ62066 280 aa6.87□□□□□ -1.31
Trim39-201ENSMUST00000042717 Bst1Q64277 311 aa6.87□□□□□ -1.31
Trim39-201ENSMUST00000042717 Mob4Q6PEB6 225 aa6.87□□□□□ -1.31
Trim39-201ENSMUST00000042717 Habp2Q8K0D2 558 aa6.87□□□□□ -1.31
Trim39-201ENSMUST00000042717 Olfr127Q8VF25 323 aa6.87□□□□□ -1.31
Trim39-201ENSMUST00000042717 Olfr1323Q8VF35 309 aa6.87□□□□□ -1.31
Trim39-201ENSMUST00000042717 Rab4bQ91ZR1 213 aa6.87□□□□□ -1.31
Trim39-201ENSMUST00000042717 Tbx19Q99ME7 446 aa6.87□□□□□ -1.31
Trim39-201ENSMUST00000042717 CklfQ9DAS1 152 aa6.87□□□□□ -1.31
Trim39-201ENSMUST00000042717 Mpdu1Q9R0Q9 247 aa6.87□□□□□ -1.31
Trim39-201ENSMUST00000042717 Olfr1189A2AV11 306 aa6.86□□□□□ -1.31
Trim39-201ENSMUST00000042717 P01787 123 aa6.86□□□□□ -1.31
Trim39-201ENSMUST00000042717 Adrb3P25962 400 aa6.86□□□□□ -1.31
Trim39-201ENSMUST00000042717 PlaurP35456 327 aa6.86□□□□□ -1.31
Trim39-201ENSMUST00000042717 Igfbp1P47876 272 aa6.86□□□□□ -1.31
Trim39-201ENSMUST00000042717 Klhl8P59280 629 aa6.86□□□□□ -1.31
Trim39-201ENSMUST00000042717 Aadacl4Q8BM81 407 aa6.86□□□□□ -1.31
Trim39-201ENSMUST00000042717 Olfr830Q8VFJ5 315 aa6.86□□□□□ -1.31
Trim39-201ENSMUST00000042717 Ms4a6bQ99N09 244 aa6.86□□□□□ -1.31
Trim39-201ENSMUST00000042717 Tmem210Q9D2F0 147 aa6.86□□□□□ -1.31
Trim39-201ENSMUST00000042717 Sgms2Q9D4B1 365 aa6.86□□□□□ -1.31
Trim39-201ENSMUST00000042717 Bola1Q9D8S9 137 aaKnown RBP6.86□□□□□ -1.31
Trim39-201ENSMUST00000042717 Rhebl1Q9D8T3 184 aa6.86□□□□□ -1.31
Trim39-201ENSMUST00000042717 HeylQ9DBX7 326 aa6.86□□□□□ -1.31
Trim39-201ENSMUST00000042717 Bhlha15Q9QYC3 197 aa6.86□□□□□ -1.31
Trim39-201ENSMUST00000042717 Sfrp4Q9Z1N6 351 aa6.86□□□□□ -1.31
Trim39-201ENSMUST00000042717 Atoh7Q9Z2E5 149 aa6.86□□□□□ -1.31
Trim39-201ENSMUST00000042717 Pdzd2E9Q1M1 2796 aa6.86□□□□□ -1.31
Trim39-201ENSMUST00000042717 BC067074F6RXI4 2391 aa6.86□□□□□ -1.31
Trim39-201ENSMUST00000042717 Epg5Q80TA9 2572 aa6.86□□□□□ -1.31
Trim39-201ENSMUST00000042717 Trav4-2A0A075B638 110 aa6.86□□□□□ -1.31
Trim39-201ENSMUST00000042717 Zfp950A0A0U1RQ46 609 aa6.86□□□□□ -1.31
Trim39-201ENSMUST00000042717 Olfr912A0A1L1SSS5 310 aa6.86□□□□□ -1.31
Trim39-201ENSMUST00000042717 Zfp708F8VPP0 541 aa6.86□□□□□ -1.31
Trim39-201ENSMUST00000042717 Gm20825J3QM67 227 aa6.86□□□□□ -1.31
Trim39-201ENSMUST00000042717 Ppt1O88531 306 aa6.86□□□□□ -1.31
Trim39-201ENSMUST00000042717 Csn1s2bP02664 143 aa6.86□□□□□ -1.31
Trim39-201ENSMUST00000042717 Olfr15P23275 312 aa6.86□□□□□ -1.31
Trim39-201ENSMUST00000042717 Ssty2Q149W4 227 aa6.86□□□□□ -1.31
Trim39-201ENSMUST00000042717 Gm21394Q497R7 227 aa6.86□□□□□ -1.31
Trim39-201ENSMUST00000042717 Gm20854Q62461 227 aa6.86□□□□□ -1.31
Trim39-201ENSMUST00000042717 Commd5Q8R395 224 aa6.86□□□□□ -1.31
Trim39-201ENSMUST00000042717 Pfdn5Q9WU28 154 aa6.86□□□□□ -1.31
Trim39-201ENSMUST00000042717 Gm28171A0A087WQ19 227 aa6.85□□□□□ -1.31
Trim39-201ENSMUST00000042717 Ctxnd2A0A1B0GQX3 59 aa6.85□□□□□ -1.31
Trim39-201ENSMUST00000042717 Ctxnd1A0A1B0GST9 59 aa6.85□□□□□ -1.31
Trim39-201ENSMUST00000042717 Ndufb11O09111 151 aa6.85□□□□□ -1.31
Trim39-201ENSMUST00000042717 Khdc1bP0C7A0 126 aa6.85□□□□□ -1.31
Trim39-201ENSMUST00000042717 Hist1h1tQ07133 208 aa6.85□□□□□ -1.31
Trim39-201ENSMUST00000042717 COA4Q8BT51 87 aa6.85□□□□□ -1.31
Trim39-201ENSMUST00000042717 AdtrpQ8C138 230 aa6.85□□□□□ -1.31
Trim39-201ENSMUST00000042717 Pitpnc1Q8K4R4 332 aa6.85□□□□□ -1.31
Trim39-201ENSMUST00000042717 Olfr577Q8VH11 312 aa6.85□□□□□ -1.31
Trim39-201ENSMUST00000042717 Ccdc198Q9CPZ1 294 aa6.85□□□□□ -1.31
Trim39-201ENSMUST00000042717 Vmn1r61W4VSP5 300 aa6.85□□□□□ -1.31
Trim39-201ENSMUST00000042717 Nav3Q80TN7 2359 aa6.85□□□□□ -1.31
Trim39-201ENSMUST00000042717 Olfr978E9Q985 311 aa6.85□□□□□ -1.31
Trim39-201ENSMUST00000042717 Efnb3O35393 340 aa6.85□□□□□ -1.31
Trim39-201ENSMUST00000042717 Ccl6P27784 116 aa6.85□□□□□ -1.31
Trim39-201ENSMUST00000042717 Gsx1P31315 261 aa6.85□□□□□ -1.31
Trim39-201ENSMUST00000042717 Ccl12Q62401 104 aa6.85□□□□□ -1.31
Trim39-201ENSMUST00000042717 Olfr1042Q7TR81 313 aa6.85□□□□□ -1.31
Trim39-201ENSMUST00000042717 Olfr43Q7TRX1 313 aa6.85□□□□□ -1.31
Trim39-201ENSMUST00000042717 Mrps26Q80ZS3 200 aa6.85□□□□□ -1.31
Trim39-201ENSMUST00000042717 Lypd6Q8BPP5 171 aa6.85□□□□□ -1.31
Trim39-201ENSMUST00000042717 Eda2rQ8BX35 297 aa6.85□□□□□ -1.31
Trim39-201ENSMUST00000042717 Mus81Q91ZJ0 551 aa6.85□□□□□ -1.31
Trim39-201ENSMUST00000042717 Olfr959Q9EQ86 311 aa6.85□□□□□ -1.31
Trim39-201ENSMUST00000042717 CompQ9R0G6 755 aa6.85□□□□□ -1.31
Trim39-201ENSMUST00000042717 FlnbQ80X90 2602 aaKnown RBP6.85□□□□□ -1.31
Trim39-201ENSMUST00000042717 Helz2E9QAM5 2947 aaKnown RBP6.85□□□□□ -1.31
Trim39-201ENSMUST00000042717 P01789 122 aa6.85□□□□□ -1.31
Trim39-201ENSMUST00000042717 Ifna4P07351 186 aa6.85□□□□□ -1.31
Trim39-201ENSMUST00000042717 Gnb4P29387 340 aa6.85□□□□□ -1.31
Trim39-201ENSMUST00000042717 ElobP62869 118 aa6.85□□□□□ -1.31
Trim39-201ENSMUST00000042717 F13bQ07968 669 aa6.85□□□□□ -1.31
Trim39-201ENSMUST00000042717 Gata4Q08369 441 aa6.85□□□□□ -1.31
Trim39-201ENSMUST00000042717 Psmb6Q60692 238 aa6.85□□□□□ -1.31
Trim39-201ENSMUST00000042717 Nbl1Q61477 178 aa6.85□□□□□ -1.31
Trim39-201ENSMUST00000042717 Olfr802Q8VGJ2 312 aa6.85□□□□□ -1.31
Trim39-201ENSMUST00000042717 Olfr1258Q8VGN6 311 aa6.85□□□□□ -1.31
Trim39-201ENSMUST00000042717 Rab9aQ9R0M6 201 aa6.85□□□□□ -1.31
Trim39-201ENSMUST00000042717 Igkv14-130A0A0G2JF45 117 aa6.84□□□□□ -1.31
Trim39-201ENSMUST00000042717 Olfr1326-ps1A0A140T8J7 311 aa6.84□□□□□ -1.31
Trim39-201ENSMUST00000042717 Gm16519F8VQK7 162 aa6.84□□□□□ -1.31
Trim39-201ENSMUST00000042717 Vmn1r194J3JS27 296 aa6.84□□□□□ -1.31
Trim39-201ENSMUST00000042717 Cnn1Q08091 297 aaKnown RBP6.84□□□□□ -1.31
Retrieved 100 of 22,080 RNA–protein pairs in 50.9 ms