RNA–Protein interactions for RNA: snR40

snR40, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR40, Length 97 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR40snR40 EFR3Q03653 782 aaKnown RBP-1.15□□□□□ -2.59
snR40snR40 YDR306CQ06640 478 aa-1.15□□□□□ -2.59
snR40snR40 RRG7Q08774 242 aaPredicted RBP-1.15□□□□□ -2.59
snR40snR40 AHA1Q12449 350 aaKnown RBP-1.15□□□□□ -2.59
snR40snR40 MRS3P10566 314 aa-1.16□□□□□ -2.6
snR40snR40 GLN4P13188 809 aaKnown RBP-1.16□□□□□ -2.6
snR40snR40 SSD1P24276 1250 aaKnown RBP RIP-Chip data-1.16□□□□□ -2.6not detected
snR40snR40 MGR1P25573 417 aa-1.16□□□□□ -2.6
snR40snR40 HGH1P48362 394 aaKnown RBP-1.16□□□□□ -2.6
snR40snR40 SHY1P53266 389 aa-1.16□□□□□ -2.6
snR40snR40 ORC4P54791 529 aa-1.16□□□□□ -2.6
snR40snR40 SMA1Q02651 245 aa-1.16□□□□□ -2.6
snR40snR40 ENV7Q12003 364 aa-1.16□□□□□ -2.6
snR40snR40 TGS1Q12052 315 aa-1.16□□□□□ -2.6
snR40snR40 BSC1Q12140 328 aa-1.16□□□□□ -2.6
snR40snR40 RRP12Q12754 1228 aaKnown RBP-1.16□□□□□ -2.6
snR40snR40 YME2P32843 850 aa-1.17□□□□□ -2.6
snR40snR40 AGP2P38090 596 aa-1.17□□□□□ -2.6
snR40snR40 RFS1P38234 210 aaKnown RBP-1.17□□□□□ -2.6
snR40snR40 ERV46P39727 415 aa-1.17□□□□□ -2.6
snR40snR40 YIR014WP40570 242 aa-1.17□□□□□ -2.6
snR40snR40 YGR210CP42942 411 aa-1.17□□□□□ -2.6
snR40snR40 TAD1P53065 400 aa-1.17□□□□□ -2.6
snR40snR40 ACS1Q01574 713 aa-1.17□□□□□ -2.6
snR40snR40 CAC2Q04199 468 aa-1.17□□□□□ -2.6
snR40snR40 MRN1Q08925 612 aaKnown RBP RIP-Chip data-1.17□□□□□ -2.6not detected
snR40snR40 LYS21Q12122 440 aaKnown RBP-1.17□□□□□ -2.6
snR40snR40 NAM9P27929 486 aa-1.18□□□□□ -2.6
snR40snR40 MET4P32389 672 aa-1.18□□□□□ -2.6
snR40snR40 ARN1P38731 627 aa-1.18□□□□□ -2.6
snR40snR40 FYV10P40492 516 aa-1.18□□□□□ -2.6
snR40snR40 COS10P52924 374 aa-1.18□□□□□ -2.6
snR40snR40 LCD1Q04377 747 aa-1.18□□□□□ -2.6
snR40snR40 ESC2Q06340 456 aa-1.18□□□□□ -2.6
snR40snR40 YBR182C-AQ8TGU6 64 aa-1.18□□□□□ -2.6
snR40snR40 CLN3P13365 580 aa-1.19□□□□□ -2.6
snR40snR40 CYC8P14922 966 aa-1.19□□□□□ -2.6
snR40snR40 SPO7P18410 259 aa-1.19□□□□□ -2.6
snR40snR40 MCK1P21965 375 aaKnown RBP-1.19□□□□□ -2.6
snR40snR40 YPS1P32329 569 aa-1.19□□□□□ -2.6
snR40snR40 AAR2P32357 355 aaPredicted RBP-1.19□□□□□ -2.6
snR40snR40 RPT1P33299 467 aaKnown RBP-1.19□□□□□ -2.6
snR40snR40 MIP6P38760 659 aaKnown RBP-1.19□□□□□ -2.6
snR40snR40 IDP2P41939 412 aa-1.19□□□□□ -2.6
snR40snR40 CEF1Q03654 590 aaPredicted RBP-1.19□□□□□ -2.6
snR40snR40 SPO20Q04359 397 aa-1.19□□□□□ -2.6
snR40snR40 YMR027WQ04371 470 aa-1.19□□□□□ -2.6
snR40snR40 RPN7Q06103 429 aaKnown RBP-1.19□□□□□ -2.6
snR40snR40 POM34Q12445 299 aa-1.19□□□□□ -2.6
snR40snR40 MAS2P11914 482 aa-1.2□□□□□ -2.6
snR40snR40 PGI1P12709 554 aaKnown RBP-1.2□□□□□ -2.6
snR40snR40 HSP26P15992 214 aaKnown RBP RIP-Chip data-1.2□□□□□ -2.6not detected
snR40snR40 PRP9P19736 530 aaKnown RBP-1.2□□□□□ -2.6
snR40snR40 PAH1P32567 862 aa-1.2□□□□□ -2.6
snR40snR40 FMT1P32785 401 aa-1.2□□□□□ -2.6
snR40snR40 DUT1P33317 147 aa-1.2□□□□□ -2.6
snR40snR40 PPE1P38796 400 aa-1.2□□□□□ -2.6
snR40snR40 VPS41P38959 992 aa-1.2□□□□□ -2.6
snR40snR40 CIR1P42940 261 aa-1.2□□□□□ -2.6
snR40snR40 BIO3P50277 480 aa-1.2□□□□□ -2.6
snR40snR40 RAD34Q06665 692 aa-1.2□□□□□ -2.6
snR40snR40 POS5Q06892 414 aa-1.2□□□□□ -2.6
snR40snR40 PLB3Q08108 686 aa-1.2□□□□□ -2.6
snR40snR40 YOR387CQ08910 206 aa-1.2□□□□□ -2.6
snR40snR40 SUP35P05453 685 aaKnown RBP-1.21□□□□□ -2.6
snR40snR40 SPT15P13393 240 aaKnown RBP-1.21□□□□□ -2.6
snR40snR40 SSA4P22202 642 aaKnown RBP-1.21□□□□□ -2.6
snR40snR40 CDC3P32457 520 aaKnown RBP-1.21□□□□□ -2.6
snR40snR40 NOP2P40991 618 aaKnown RBP-1.21□□□□□ -2.6
snR40snR40 ORC5P50874 479 aa-1.21□□□□□ -2.6
snR40snR40 YNL181WP53878 407 aa-1.21□□□□□ -2.6
snR40snR40 RAD33Q04231 177 aa-1.21□□□□□ -2.6
snR40snR40 RPC11Q04307 110 aaPredicted RBP-1.21□□□□□ -2.6
snR40snR40 CIA1Q05583 330 aa-1.21□□□□□ -2.6
snR40snR40 YOR389WQ08912 624 aa-1.21□□□□□ -2.6
snR40snR40 AAC1P04710 309 aa-1.22□□□□□ -2.6
snR40snR40 RPL15AP05748 204 aaKnown RBP-1.22□□□□□ -2.6
snR40snR40 PMR1P13586 950 aa-1.22□□□□□ -2.6
snR40snR40 CCL1P37366 393 aa-1.22□□□□□ -2.6
snR40snR40 ERP5P38819 212 aa-1.22□□□□□ -2.6
snR40snR40 DIM1P41819 318 aaKnown RBP-1.22□□□□□ -2.6
snR40snR40 SHR5P41912 237 aa-1.22□□□□□ -2.6
snR40snR40 ECM11Q04110 302 aa-1.22□□□□□ -2.6
snR40snR40 HCR1Q05775 265 aaKnown RBP-1.22□□□□□ -2.6
snR40snR40 TMS1Q12116 473 aa-1.22□□□□□ -2.6
snR40snR40 INP53Q12271 1107 aa-1.22□□□□□ -2.6
snR40snR40 YCL021W-AQ96VH3 125 aa-1.22□□□□□ -2.6
snR40snR40 RTC1Q08281 1341 aa-1.22□□□□□ -2.61
snR40snR40 SEC15P22224 910 aa-1.23□□□□□ -2.61
snR40snR40 YPT7P32939 208 aa-1.23□□□□□ -2.61
snR40snR40 SEF1P34228 1148 aa-1.23□□□□□ -2.61
snR40snR40 RPH1P39956 796 aa-1.23□□□□□ -2.61
snR40snR40 BAT2P47176 376 aaKnown RBP-1.23□□□□□ -2.61
snR40snR40 NUP57P48837 541 aa-1.23□□□□□ -2.61
snR40snR40 ZDS1P50111 915 aaKnown RBP-1.23□□□□□ -2.61
snR40snR40 YGL036WP53185 909 aaPredicted RBP-1.23□□□□□ -2.61
snR40snR40 EAF7P53911 425 aaKnown RBP-1.23□□□□□ -2.61
snR40snR40 YMR178WQ03219 274 aaKnown RBP-1.23□□□□□ -2.61
snR40snR40 CBP1P07252 654 aa-1.24□□□□□ -2.61
snR40snR40 HOP1P20050 605 aa-1.24□□□□□ -2.61
Retrieved 100 of 5,963 RNA–protein pairs in 19.8 ms