RNA–Protein interactions for RNA: YPR028W

YOP1, Transcript of Membrane protein that interacts with Yip1p to mediate membrane traffic, yeastyeast

Gene YOP1, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YOP1YPR028W SDA1P53313 767 aaKnown RBP2.36□□□□□ -2.03
YOP1YPR028W USA1Q03714 838 aa2.36□□□□□ -2.03
YOP1YPR028W YMR317WQ04893 1140 aa2.36□□□□□ -2.03
YOP1YPR028W YCG1Q06680 1035 aa2.36□□□□□ -2.03
YOP1YPR028W ADR1P07248 1323 aa2.36□□□□□ -2.03
YOP1YPR028W SFP1P32432 683 aa2.35□□□□□ -2.03
YOP1YPR028W YPT10P38146 199 aa2.35□□□□□ -2.03
YOP1YPR028W CDS1P38221 457 aa2.35□□□□□ -2.03
YOP1YPR028W YHR033WP38690 423 aa2.35□□□□□ -2.03
YOP1YPR028W CKB2P38930 258 aa2.35□□□□□ -2.03
YOP1YPR028W YIL152WP40455 235 aa2.35□□□□□ -2.03
YOP1YPR028W TES1P41903 349 aaKnown RBP2.35□□□□□ -2.03
YOP1YPR028W SNU56Q03782 492 aaKnown RBP2.35□□□□□ -2.03
YOP1YPR028W SMA2Q04658 369 aa2.35□□□□□ -2.03
YOP1YPR028W HRD3Q05787 833 aa2.35□□□□□ -2.03
YOP1YPR028W CYK3Q07533 885 aa2.35□□□□□ -2.03
YOP1YPR028W THI73Q07904 523 aa2.35□□□□□ -2.03
YOP1YPR028W DSE3Q08729 430 aa2.35□□□□□ -2.03
YOP1YPR028W UBX3Q12229 455 aa2.35□□□□□ -2.03
YOP1YPR028W PNO1Q99216 274 aaKnown RBP2.35□□□□□ -2.03
YOP1YPR028W AAC1P04710 309 aa2.34□□□□□ -2.03
YOP1YPR028W YJU2P28320 278 aaPredicted RBP2.34□□□□□ -2.03
YOP1YPR028W TYS1P36421 394 aaKnown RBP2.34□□□□□ -2.03
YOP1YPR028W GND1P38720 489 aaKnown RBP2.34□□□□□ -2.03
YOP1YPR028W HXT6P39003 570 aaKnown RBP2.34□□□□□ -2.03
YOP1YPR028W HXT7P39004 570 aa2.34□□□□□ -2.03
YOP1YPR028W LRO1P40345 661 aa2.34□□□□□ -2.03
YOP1YPR028W YNR029CP53729 429 aaKnown RBP2.34□□□□□ -2.03
YOP1YPR028W YNL058CP53947 316 aa2.34□□□□□ -2.03
YOP1YPR028W ECM9Q02202 377 aa2.34□□□□□ -2.03
YOP1YPR028W MTQ2Q03920 221 aaPredicted RBP2.34□□□□□ -2.03
YOP1YPR028W UTP14Q04500 899 aaKnown RBP2.34□□□□□ -2.03
YOP1YPR028W RPS21BQ3E754 87 aaKnown RBP2.34□□□□□ -2.03
YOP1YPR028W YMR230W-AQ3E7B5 62 aa2.34□□□□□ -2.03
YOP1YPR028W ILS1P09436 1072 aaKnown RBP2.33□□□□□ -2.04
YOP1YPR028W YPK1P12688 680 aaKnown RBP2.33□□□□□ -2.04
YOP1YPR028W ACO1P19414 778 aaKnown RBP RIP-Chip data2.33□□□□□ -2.04not detected
YOP1YPR028W IES1P43579 692 aa2.33□□□□□ -2.04
YOP1YPR028W YJR142WP47173 342 aa2.33□□□□□ -2.04
YOP1YPR028W HLJ1P48353 224 aa2.33□□□□□ -2.04
YOP1YPR028W GPG1P53130 126 aa2.33□□□□□ -2.04
YOP1YPR028W ARR3Q06598 404 aa2.33□□□□□ -2.04
YOP1YPR028W CRT10Q08226 957 aa2.33□□□□□ -2.04
YOP1YPR028W MRN1Q08925 612 aaKnown RBP RIP-Chip data2.33□□□□□ -2.04not detected
YOP1YPR028W GLN4P13188 809 aaKnown RBP2.32□□□□□ -2.04
YOP1YPR028W BET2P20133 325 aa2.32□□□□□ -2.04
YOP1YPR028W SEC65P29478 273 aa2.32□□□□□ -2.04
YOP1YPR028W PRP19P32523 503 aaKnown RBP2.32□□□□□ -2.04
YOP1YPR028W FPR3P38911 411 aaKnown RBP2.32□□□□□ -2.04
YOP1YPR028W YJL193WP39542 402 aa2.32□□□□□ -2.04
YOP1YPR028W DOS2P54858 310 aa2.32□□□□□ -2.04
YOP1YPR028W HFI1Q12060 488 aa2.32□□□□□ -2.04
YOP1YPR028W ATX2Q12067 313 aa2.32□□□□□ -2.04
YOP1YPR028W CET1O13297 549 aaPredicted RBP2.31□□□□□ -2.04
YOP1YPR028W TUF1P02992 437 aaKnown RBP2.31□□□□□ -2.04
YOP1YPR028W RPS21AP0C0V8 87 aaKnown RBP2.31□□□□□ -2.04
YOP1YPR028W FAT1P38225 669 aa2.31□□□□□ -2.04
YOP1YPR028W FTH1P38310 465 aa2.31□□□□□ -2.04
YOP1YPR028W GPP1P41277 250 aaKnown RBP2.31□□□□□ -2.04
YOP1YPR028W GZF3P42944 551 aaKnown RBP2.31□□□□□ -2.04
YOP1YPR028W SAD1P43589 448 aa2.31□□□□□ -2.04
YOP1YPR028W YGR153WP48238 217 aa2.31□□□□□ -2.04
YOP1YPR028W UME1Q03010 460 aa2.31□□□□□ -2.04
YOP1YPR028W YOR389WQ08912 624 aa2.31□□□□□ -2.04
YOP1YPR028W SEC12P11655 471 aa2.3□□□□□ -2.04
YOP1YPR028W HMG2P12684 1045 aa2.3□□□□□ -2.04
YOP1YPR028W CDC26P14724 124 aa2.3□□□□□ -2.04
YOP1YPR028W VPS33P20795 691 aa2.3□□□□□ -2.04
YOP1YPR028W OAF3P36023 863 aa2.3□□□□□ -2.04
YOP1YPR028W YIL169CP40442 995 aa2.3□□□□□ -2.04
YOP1YPR028W CIR1P42940 261 aa2.3□□□□□ -2.04
YOP1YPR028W MNN11P46985 422 aaKnown RBP2.3□□□□□ -2.04
YOP1YPR028W PMT3P47190 753 aa2.3□□□□□ -2.04
YOP1YPR028W MTD1Q02046 320 aaKnown RBP2.3□□□□□ -2.04
YOP1YPR028W YMR034CQ05131 434 aaPredicted RBP2.3□□□□□ -2.04
YOP1YPR028W YTM1Q12024 460 aaPredicted RBP2.3□□□□□ -2.04
YOP1YPR028W APM4Q99186 491 aa2.3□□□□□ -2.04
YOP1YPR028W PCK1P10963 549 aa2.29□□□□□ -2.04
YOP1YPR028W DSS4P32601 143 aa2.29□□□□□ -2.04
YOP1YPR028W GDA1P32621 518 aa2.29□□□□□ -2.04
YOP1YPR028W MTC7P32633 139 aa2.29□□□□□ -2.04
YOP1YPR028W IMD2P38697 523 aaKnown RBP2.29□□□□□ -2.04
YOP1YPR028W TOM71P38825 639 aaKnown RBP2.29□□□□□ -2.04
YOP1YPR028W DHH1P39517 506 aaKnown RBP2.29□□□□□ -2.04
YOP1YPR028W VRG4P40107 337 aa2.29□□□□□ -2.04
YOP1YPR028W YDL183CP48569 320 aa2.29□□□□□ -2.04
YOP1YPR028W IMD3P50095 523 aaKnown RBP2.29□□□□□ -2.04
YOP1YPR028W HOS2P53096 452 aaPredicted RBP2.29□□□□□ -2.04
YOP1YPR028W SQS1P53866 767 aaKnown RBP2.29□□□□□ -2.04
YOP1YPR028W VTC3Q02725 835 aa2.29□□□□□ -2.04
YOP1YPR028W YHM2Q04013 314 aa2.29□□□□□ -2.04
YOP1YPR028W RAD33Q04231 177 aa2.29□□□□□ -2.04
YOP1YPR028W MLH2Q07980 695 aa2.29□□□□□ -2.04
YOP1YPR028W YGR161W-CQ3E744 92 aa2.29□□□□□ -2.04
YOP1YPR028W MF(ALPHA)2P32435 120 aa2.28□□□□□ -2.04
YOP1YPR028W DAL3P32459 195 aa2.28□□□□□ -2.04
YOP1YPR028W DID4P36108 232 aa2.28□□□□□ -2.04
YOP1YPR028W EXO84P38261 753 aa2.28□□□□□ -2.04
YOP1YPR028W RAD26P40352 1085 aa2.28□□□□□ -2.04
YOP1YPR028W VID28P40547 921 aa2.28□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 23.9 ms