RNA–Protein interactions for RNA: YPL139C

UME1, Transcript of Component of both the Rpd3S and Rpd3L histone deacetylase complexes, yeastyeast

Gene UME1, Length 1,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UME1YPL139C YJR079WP47126 109 aa7.47□□□□□ -1.21
UME1YPL139C YGR021WP53212 290 aa7.47□□□□□ -1.21
UME1YPL139C TDA7P53882 636 aaPredicted RBP7.47□□□□□ -1.21
UME1YPL139C CDC55Q00362 526 aa7.47□□□□□ -1.21
UME1YPL139C SYH1Q02875 849 aaKnown RBP7.47□□□□□ -1.21
UME1YPL139C SOV1Q04748 898 aa7.47□□□□□ -1.21
UME1YPL139C MFB1Q04922 465 aa7.47□□□□□ -1.21
UME1YPL139C AAD4Q07747 329 aa7.47□□□□□ -1.21
UME1YPL139C PEX15Q08215 383 aa7.47□□□□□ -1.21
UME1YPL139C PIN2Q12057 282 aa7.47□□□□□ -1.21
UME1YPL139C PER33Q12144 273 aa7.47□□□□□ -1.21
UME1YPL139C SEN1Q00416 2231 aaKnown RBP7.47□□□□□ -1.21
UME1YPL139C YCR015CP25616 317 aa7.46□□□□□ -1.21
UME1YPL139C STE13P33894 931 aa7.46□□□□□ -1.21
UME1YPL139C ALY2P47029 1046 aa7.46□□□□□ -1.21
UME1YPL139C RSM26P47141 266 aa7.46□□□□□ -1.21
UME1YPL139C PEX31P53203 462 aa7.46□□□□□ -1.21
UME1YPL139C PIR1Q03178 341 aa7.46□□□□□ -1.21
UME1YPL139C RKM2Q03942 479 aa7.46□□□□□ -1.21
UME1YPL139C SXM1Q04175 944 aaKnown RBP7.46□□□□□ -1.21
UME1YPL139C UFO1Q04511 668 aa7.46□□□□□ -1.21
UME1YPL139C THI21Q08975 551 aa7.46□□□□□ -1.21
UME1YPL139C YLR046CQ12253 270 aa7.46□□□□□ -1.21
UME1YPL139C IZH4Q99393 312 aa7.46□□□□□ -1.21
UME1YPL139C CYC8P14922 966 aa7.46□□□□□ -1.22
UME1YPL139C YJU3P28321 313 aa7.46□□□□□ -1.22
UME1YPL139C NUD1P32336 851 aa7.46□□□□□ -1.22
UME1YPL139C RML2P32611 393 aa7.46□□□□□ -1.22
UME1YPL139C GIP1P38229 639 aa7.46□□□□□ -1.22
UME1YPL139C HIS2P38635 335 aa7.46□□□□□ -1.22
UME1YPL139C FMO1P38866 432 aa7.46□□□□□ -1.22
UME1YPL139C PRM9P39551 298 aa7.46□□□□□ -1.22
UME1YPL139C EXO1P39875 702 aa7.46□□□□□ -1.22
UME1YPL139C OSW5P40219 148 aa7.46□□□□□ -1.22
UME1YPL139C SER33P40510 469 aa7.46□□□□□ -1.22
UME1YPL139C MKT1P40850 830 aaKnown RBP7.46□□□□□ -1.22
UME1YPL139C EMW1P42842 904 aaKnown RBP7.46□□□□□ -1.22
UME1YPL139C BST1P43571 1029 aa7.46□□□□□ -1.22
UME1YPL139C ATG36P46983 293 aa7.46□□□□□ -1.22
UME1YPL139C PYK2P52489 506 aaKnown RBP7.46□□□□□ -1.22
UME1YPL139C FLC3P53121 802 aa7.46□□□□□ -1.22
UME1YPL139C NOG2P53742 486 aaKnown RBP7.46□□□□□ -1.22
UME1YPL139C YNL040WP53960 456 aaPredicted RBP7.46□□□□□ -1.22
UME1YPL139C YMR018WQ04364 514 aa7.46□□□□□ -1.22
UME1YPL139C GEX1P25596 615 aa7.45□□□□□ -1.22
UME1YPL139C ADY2P25613 283 aa7.45□□□□□ -1.22
UME1YPL139C HXT1P32465 570 aa7.45□□□□□ -1.22
UME1YPL139C GEX2P36173 615 aa7.45□□□□□ -1.22
UME1YPL139C KAP104P38217 918 aaKnown RBP7.45□□□□□ -1.22
UME1YPL139C GDH3P39708 457 aa7.45□□□□□ -1.22
UME1YPL139C SAP185P40856 1058 aa7.45□□□□□ -1.22
UME1YPL139C ASN2P49090 572 aaKnown RBP7.45□□□□□ -1.22
UME1YPL139C EMC4P53073 190 aa7.45□□□□□ -1.22
UME1YPL139C NRD1P53617 575 aaKnown RBP RIP-Chip data7.45□□□□□ -1.22not detected
UME1YPL139C SMA1Q02651 245 aa7.45□□□□□ -1.22
UME1YPL139C ADI1Q03677 179 aa7.45□□□□□ -1.22
UME1YPL139C YSH1Q06224 779 aaPredicted RBP7.45□□□□□ -1.22
UME1YPL139C RPS9AO13516 197 aaKnown RBP7.44□□□□□ -1.22
UME1YPL139C HIS1P00498 297 aaKnown RBP7.44□□□□□ -1.22
UME1YPL139C RPL40AP0CH08 128 aaKnown RBP7.44□□□□□ -1.22
UME1YPL139C RPL40BP0CH09 128 aaKnown RBP7.44□□□□□ -1.22
UME1YPL139C YPK1P12688 680 aaKnown RBP7.44□□□□□ -1.22
UME1YPL139C CLC1P17891 233 aa7.44□□□□□ -1.22
UME1YPL139C KAR9P32526 644 aa7.44□□□□□ -1.22
UME1YPL139C MIC60P36112 540 aa7.44□□□□□ -1.22
UME1YPL139C RRT2P38332 387 aa7.44□□□□□ -1.22
UME1YPL139C CRP1P38845 465 aaKnown RBP7.44□□□□□ -1.22
UME1YPL139C ERP2P39704 215 aa7.44□□□□□ -1.22
UME1YPL139C SEC9P40357 651 aa7.44□□□□□ -1.22
UME1YPL139C ATM1P40416 690 aa7.44□□□□□ -1.22
UME1YPL139C EFM4P40516 257 aa7.44□□□□□ -1.22
UME1YPL139C OSW7P43611 510 aa7.44□□□□□ -1.22
UME1YPL139C TRF5P48561 642 aaKnown RBP7.44□□□□□ -1.22
UME1YPL139C YNR063WP53749 607 aa7.44□□□□□ -1.22
UME1YPL139C SUB1P54000 292 aaKnown RBP7.44□□□□□ -1.22
UME1YPL139C PEX13P80667 386 aa7.44□□□□□ -1.22
UME1YPL139C INP2Q03824 705 aa7.44□□□□□ -1.22
UME1YPL139C RPC11Q04307 110 aaPredicted RBP7.44□□□□□ -1.22
UME1YPL139C IVY1Q04934 453 aa7.44□□□□□ -1.22
UME1YPL139C YLR012CQ07927 99 aa7.44□□□□□ -1.22
UME1YPL139C OCA6Q12454 224 aa7.44□□□□□ -1.22
UME1YPL139C ACC1Q00955 2233 aaKnown RBP7.43□□□□□ -1.22
UME1YPL139C MEI4P29467 408 aa7.43□□□□□ -1.22
UME1YPL139C DBF4P32325 704 aa7.43□□□□□ -1.22
UME1YPL139C ALY1P36117 915 aa7.43□□□□□ -1.22
UME1YPL139C TCD1P38756 429 aa7.43□□□□□ -1.22
UME1YPL139C REF2P42073 533 aaPredicted RBP7.43□□□□□ -1.22
UME1YPL139C MRX6P48564 524 aa7.43□□□□□ -1.22
UME1YPL139C AQR1P53943 586 aa7.43□□□□□ -1.22
UME1YPL139C RPL34AP87262 121 aaPredicted RBP7.43□□□□□ -1.22
UME1YPL139C YMR187CQ03236 431 aa7.43□□□□□ -1.22
UME1YPL139C SND1Q04007 877 aa7.43□□□□□ -1.22
UME1YPL139C HPF1Q05164 967 aa7.43□□□□□ -1.22
UME1YPL139C VPS38Q05919 439 aa7.43□□□□□ -1.22
UME1YPL139C KAP95Q06142 861 aaKnown RBP7.43□□□□□ -1.22
UME1YPL139C DAS2Q12084 232 aa7.43□□□□□ -1.22
UME1YPL139C ENO1P00924 437 aaKnown RBP7.42□□□□□ -1.22
UME1YPL139C DAL81P21657 970 aa7.42□□□□□ -1.22
UME1YPL139C PYC2P32327 1180 aaKnown RBP7.42□□□□□ -1.22
UME1YPL139C BLI1P35727 113 aa7.42□□□□□ -1.22
Retrieved 100 of 5,963 RNA–protein pairs in 45.1 ms