RNA–Protein interactions for RNA: YPL002C

SNF8, Transcript of Component of the ESCRT-II complex, yeastyeast

Gene SNF8, Length 702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF8YPL002C LIF1P53150 421 aa4.7□□□□□ -1.66
SNF8YPL002C YNL034WP53963 612 aa4.7□□□□□ -1.66
SNF8YPL002C YNL018CP53976 612 aa4.7□□□□□ -1.66
SNF8YPL002C GAD1Q04792 585 aa4.7□□□□□ -1.66
SNF8YPL002C ARO10Q06408 635 aa4.7□□□□□ -1.66
SNF8YPL002C TAH18Q12181 623 aa4.7□□□□□ -1.66
SNF8YPL002C SIR3P06701 978 aa4.69□□□□□ -1.66
SNF8YPL002C NUC1P08466 329 aa4.69□□□□□ -1.66
SNF8YPL002C PWP2P25635 923 aaKnown RBP4.69□□□□□ -1.66
SNF8YPL002C KTR3P38130 404 aaPredicted RBP4.69□□□□□ -1.66
SNF8YPL002C APN2P38207 520 aa4.69□□□□□ -1.66
SNF8YPL002C OSH3P38713 996 aaKnown RBP4.69□□□□□ -1.66
SNF8YPL002C YJL206CP39529 758 aa4.69□□□□□ -1.66
SNF8YPL002C ECM1P39715 212 aa4.69□□□□□ -1.66
SNF8YPL002C YIL166CP40445 542 aa4.69□□□□□ -1.66
SNF8YPL002C SNM1P40993 198 aa4.69□□□□□ -1.66
SNF8YPL002C YJL049WP47048 450 aa4.69□□□□□ -1.66
SNF8YPL002C RPS7BP48164 190 aaKnown RBP4.69□□□□□ -1.66
SNF8YPL002C MTL1P53214 551 aa4.69□□□□□ -1.66
SNF8YPL002C ECM16Q04217 1267 aaKnown RBP4.69□□□□□ -1.66
SNF8YPL002C CDC45Q08032 650 aa4.69□□□□□ -1.66
SNF8YPL002C TAF3Q12297 353 aa4.69□□□□□ -1.66
SNF8YPL002C CLF1Q12309 687 aaPredicted RBP4.69□□□□□ -1.66
SNF8YPL002C MDM10P18409 493 aa4.68□□□□□ -1.66
SNF8YPL002C RIT1P23796 513 aa4.68□□□□□ -1.66
SNF8YPL002C PPZ1P26570 692 aa4.68□□□□□ -1.66
SNF8YPL002C EMP70P32802 667 aa4.68□□□□□ -1.66
SNF8YPL002C LYS9P38999 446 aa4.68□□□□□ -1.66
SNF8YPL002C CCT3P39077 534 aaKnown RBP4.68□□□□□ -1.66
SNF8YPL002C MMF1P40185 145 aaKnown RBP4.68□□□□□ -1.66
SNF8YPL002C ALY2P47029 1046 aa4.68□□□□□ -1.66
SNF8YPL002C PRP31P49704 494 aaPredicted RBP4.68□□□□□ -1.66
SNF8YPL002C FMS1P50264 508 aa4.68□□□□□ -1.66
SNF8YPL002C RPS15Q01855 142 aaKnown RBP4.68□□□□□ -1.66
SNF8YPL002C DMC1P25453 334 aa4.67□□□□□ -1.66
SNF8YPL002C DID4P36108 232 aa4.67□□□□□ -1.66
SNF8YPL002C UBS1P38290 277 aa4.67□□□□□ -1.66
SNF8YPL002C YHR112CP38716 378 aa4.67□□□□□ -1.66
SNF8YPL002C FMO1P38866 432 aa4.67□□□□□ -1.66
SNF8YPL002C TPM2P40414 161 aa4.67□□□□□ -1.66
SNF8YPL002C NDC80P40460 691 aa4.67□□□□□ -1.66
SNF8YPL002C YIL092WP40497 633 aa4.67□□□□□ -1.66
SNF8YPL002C FAF1P40546 346 aaPredicted RBP4.67□□□□□ -1.66
SNF8YPL002C OPT1P40897 799 aa4.67□□□□□ -1.66
SNF8YPL002C PAN2P53010 1115 aaPredicted RBP4.67□□□□□ -1.66
SNF8YPL002C YAP1802P53309 568 aa4.67□□□□□ -1.66
SNF8YPL002C COQ11Q05892 277 aa4.67□□□□□ -1.66
SNF8YPL002C RGC1Q06108 1083 aaKnown RBP4.67□□□□□ -1.66
SNF8YPL002C CHO2P05374 869 aaKnown RBP4.66□□□□□ -1.66
SNF8YPL002C SES1P07284 462 aaKnown RBP4.66□□□□□ -1.66
SNF8YPL002C RPL8AP17076 256 aaKnown RBP4.66□□□□□ -1.66
SNF8YPL002C GAL11P19659 1081 aa4.66□□□□□ -1.66
SNF8YPL002C ADE2P21264 571 aaKnown RBP4.66□□□□□ -1.66
SNF8YPL002C OPI1P21957 404 aa4.66□□□□□ -1.66
SNF8YPL002C PRO3P32263 286 aaKnown RBP4.66□□□□□ -1.66
SNF8YPL002C MSS51P32335 436 aa4.66□□□□□ -1.66
SNF8YPL002C BUD2P33314 1104 aa4.66□□□□□ -1.66
SNF8YPL002C NMD2P38798 1089 aaKnown RBP4.66□□□□□ -1.66
SNF8YPL002C SFB3P38810 929 aa4.66□□□□□ -1.66
SNF8YPL002C HRB1P38922 454 aaKnown RBP RIP-Chip data4.66□□□□□ -1.66not detected
SNF8YPL002C REV7P38927 245 aa4.66□□□□□ -1.66
SNF8YPL002C BUD16P39988 312 aa4.66□□□□□ -1.66
SNF8YPL002C HMF1P40037 129 aaKnown RBP4.66□□□□□ -1.66
SNF8YPL002C MDR1P53258 950 aa4.66□□□□□ -1.66
SNF8YPL002C PTA1Q01329 785 aaPredicted RBP4.66□□□□□ -1.66
SNF8YPL002C RPT6Q01939 405 aaKnown RBP4.66□□□□□ -1.66
SNF8YPL002C PNG1Q02890 363 aa4.66□□□□□ -1.66
SNF8YPL002C SUE1Q06524 206 aa4.66□□□□□ -1.66
SNF8YPL002C YNL162W-AQ3E7A8 72 aa4.66□□□□□ -1.66
SNF8YPL002C YKL033W-AQ86ZR7 236 aa4.66□□□□□ -1.66
SNF8YPL002C YLR149CQ99296 730 aa4.66□□□□□ -1.66
SNF8YPL002C PYC1P11154 1178 aaKnown RBP4.65□□□□□ -1.67
SNF8YPL002C ILV6P25605 309 aaKnown RBP4.65□□□□□ -1.67
SNF8YPL002C IMG2P25642 146 aaPredicted RBP4.65□□□□□ -1.67
SNF8YPL002C MVD1P32377 396 aaKnown RBP4.65□□□□□ -1.67
SNF8YPL002C ANP1P32629 500 aa4.65□□□□□ -1.67
SNF8YPL002C DRE2P36152 348 aa4.65□□□□□ -1.67
SNF8YPL002C TVP38P36164 337 aa4.65□□□□□ -1.67
SNF8YPL002C HCR1Q05775 265 aaKnown RBP4.65□□□□□ -1.67
SNF8YPL002C YLR455WQ06188 304 aa4.65□□□□□ -1.67
SNF8YPL002C PIG1Q06216 648 aa4.65□□□□□ -1.67
SNF8YPL002C BRE1Q07457 700 aaKnown RBP4.65□□□□□ -1.67
SNF8YPL002C RVB2Q12464 471 aaKnown RBP4.65□□□□□ -1.67
SNF8YPL002C BET2P20133 325 aa4.64□□□□□ -1.67
SNF8YPL002C UBC1P21734 215 aaKnown RBP4.64□□□□□ -1.67
SNF8YPL002C MBR1P23493 339 aa4.64□□□□□ -1.67
SNF8YPL002C ERG6P25087 383 aaKnown RBP4.64□□□□□ -1.67
SNF8YPL002C RME1P32338 300 aaKnown RBP4.64□□□□□ -1.67
SNF8YPL002C SWE1P32944 819 aa4.64□□□□□ -1.67
SNF8YPL002C MYO3P36006 1272 aa4.64□□□□□ -1.67
SNF8YPL002C SLX1P38324 304 aa4.64□□□□□ -1.67
SNF8YPL002C STB5P38699 743 aa4.64□□□□□ -1.67
SNF8YPL002C PIB2P53191 635 aa4.64□□□□□ -1.67
SNF8YPL002C SUB1P54000 292 aaKnown RBP4.64□□□□□ -1.67
SNF8YPL002C ARG5,6Q01217 863 aa4.64□□□□□ -1.67
SNF8YPL002C HRP1Q99383 534 aaKnown RBP4.64□□□□□ -1.67
SNF8YPL002C Q0142Q9ZZW4 58 aa4.64□□□□□ -1.67
SNF8YPL002C BEM2P39960 2167 aaKnown RBP4.64□□□□□ -1.67
SNF8YPL002C RIF1P29539 1916 aa4.64□□□□□ -1.67
SNF8YPL002C ACC1Q00955 2233 aaKnown RBP4.64□□□□□ -1.67
Retrieved 100 of 5,963 RNA–protein pairs in 37.6 ms