RNA–Protein interactions for RNA: YOR157C

PUP1, Transcript of Beta 2 subunit of the 20S proteasome, yeastyeast

Gene PUP1, Length 786 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUP1YOR157C PEX11Q12462 236 aa8.89□□□□□ -0.99
PUP1YOR157C SRB2P34162 210 aa8.88□□□□□ -0.99
PUP1YOR157C VAC8P39968 578 aa8.88□□□□□ -0.99
PUP1YOR157C EDC3P39998 551 aaKnown RBP8.88□□□□□ -0.99
PUP1YOR157C YER189WP40104 122 aa8.88□□□□□ -0.99
PUP1YOR157C SNG1P46950 547 aa8.88□□□□□ -0.99
PUP1YOR157C MRX6P48564 524 aa8.88□□□□□ -0.99
PUP1YOR157C YML082WQ04533 649 aaKnown RBP8.88□□□□□ -0.99
PUP1YOR157C LEU1P07264 779 aaKnown RBP8.87□□□□□ -0.99
PUP1YOR157C SST2P11972 698 aaKnown RBP8.87□□□□□ -0.99
PUP1YOR157C GLG2P47011 380 aa8.87□□□□□ -0.99
PUP1YOR157C SUR7P54003 302 aa8.87□□□□□ -0.99
PUP1YOR157C HOS3Q02959 697 aaKnown RBP8.87□□□□□ -0.99
PUP1YOR157C COG4Q06096 861 aa8.87□□□□□ -0.99
PUP1YOR157C AAD4Q07747 329 aa8.87□□□□□ -0.99
PUP1YOR157C RED1P14291 827 aa8.86□□□□□ -0.99
PUP1YOR157C LIP5P32875 414 aa8.86□□□□□ -0.99
PUP1YOR157C MPE1P35728 441 aaKnown RBP8.86□□□□□ -0.99
PUP1YOR157C EMW1P42842 904 aaKnown RBP8.86□□□□□ -0.99
PUP1YOR157C CTK3P46963 296 aaPredicted RBP8.86□□□□□ -0.99
PUP1YOR157C YGR237CP50089 785 aa8.86□□□□□ -0.99
PUP1YOR157C ORC3P54790 616 aa8.86□□□□□ -0.99
PUP1YOR157C POB3Q04636 552 aaKnown RBP8.86□□□□□ -0.99
PUP1YOR157C FRE7Q12333 620 aa8.86□□□□□ -0.99
PUP1YOR157C HIS1P00498 297 aaKnown RBP8.85□□□□□ -0.99
PUP1YOR157C IPP1P00817 287 aaKnown RBP8.85□□□□□ -0.99
PUP1YOR157C VMA4P22203 233 aaKnown RBP8.85□□□□□ -0.99
PUP1YOR157C ADD66P36040 267 aa8.85□□□□□ -0.99
PUP1YOR157C APM3P38153 483 aa8.85□□□□□ -0.99
PUP1YOR157C NPR3P38742 1146 aa8.85□□□□□ -0.99
PUP1YOR157C RAD26P40352 1085 aa8.85□□□□□ -0.99
PUP1YOR157C PAN6P40459 309 aa8.85□□□□□ -0.99
PUP1YOR157C CFD1P40558 293 aa8.85□□□□□ -0.99
PUP1YOR157C PHO86P46956 311 aa8.85□□□□□ -0.99
PUP1YOR157C PUS2P53167 370 aa8.85□□□□□ -0.99
PUP1YOR157C HOP2P53187 214 aa8.85□□□□□ -0.99
PUP1YOR157C YMR178WQ03219 274 aaKnown RBP8.85□□□□□ -0.99
PUP1YOR157C UFO1Q04511 668 aa8.85□□□□□ -0.99
PUP1YOR157C AFT2Q08957 416 aa8.85□□□□□ -0.99
PUP1YOR157C SFI1Q12369 946 aa8.85□□□□□ -0.99
PUP1YOR157C MRPL8P22353 238 aa8.84□□□□□ -0.99
PUP1YOR157C ADY2P25613 283 aa8.84□□□□□ -0.99
PUP1YOR157C KAR9P32526 644 aa8.84□□□□□ -0.99
PUP1YOR157C TFC3P34111 1160 aa8.84□□□□□ -0.99
PUP1YOR157C SLD2P34252 453 aa8.84□□□□□ -0.99
PUP1YOR157C SRP68P38687 599 aaKnown RBP8.84□□□□□ -0.99
PUP1YOR157C FSH1P38777 243 aaKnown RBP8.84□□□□□ -0.99
PUP1YOR157C AIP1P46680 615 aaKnown RBP8.84□□□□□ -0.99
PUP1YOR157C YJR124CP47159 448 aa8.84□□□□□ -0.99
PUP1YOR157C ASN2P49090 572 aaKnown RBP8.84□□□□□ -0.99
PUP1YOR157C VAC7P53950 1165 aa8.84□□□□□ -0.99
PUP1YOR157C ELP3Q02908 557 aaKnown RBP8.84□□□□□ -0.99
PUP1YOR157C RSM10Q03201 203 aa8.84□□□□□ -0.99
PUP1YOR157C YAP7Q08182 245 aa8.84□□□□□ -0.99
PUP1YOR157C YOR059CQ08448 450 aaKnown RBP8.84□□□□□ -0.99
PUP1YOR157C SEC39Q12745 709 aa8.84□□□□□ -0.99
PUP1YOR157C UBR1P19812 1950 aa8.84□□□□□ -0.99
PUP1YOR157C CDC33P07260 213 aaKnown RBP8.83□□□□□ -1
PUP1YOR157C PPH21P23594 369 aa8.83□□□□□ -1
PUP1YOR157C MIH1P23748 554 aa8.83□□□□□ -1
PUP1YOR157C PAT1P25644 796 aaKnown RBP8.83□□□□□ -1
PUP1YOR157C RPC25P35718 212 aa8.83□□□□□ -1
PUP1YOR157C KAP104P38217 918 aaKnown RBP8.83□□□□□ -1
PUP1YOR157C ALR2P43553 858 aa8.83□□□□□ -1
PUP1YOR157C YGR283CP53336 341 aaPredicted RBP8.83□□□□□ -1
PUP1YOR157C VHS1Q03785 461 aa8.83□□□□□ -1
PUP1YOR157C VMS1Q04311 632 aaKnown RBP8.83□□□□□ -1
PUP1YOR157C MPH2P0CD99 609 aa8.82□□□□□ -1
PUP1YOR157C BIK1P11709 440 aa8.82□□□□□ -1
PUP1YOR157C KAR3P17119 729 aa8.82□□□□□ -1
PUP1YOR157C NAR1P23503 491 aaKnown RBP8.82□□□□□ -1
PUP1YOR157C APL1P27351 700 aa8.82□□□□□ -1
PUP1YOR157C LYP1P32487 611 aa8.82□□□□□ -1
PUP1YOR157C PXL1P36166 706 aa8.82□□□□□ -1
PUP1YOR157C BCD1P38772 366 aa8.82□□□□□ -1
PUP1YOR157C CHS7P38843 316 aa8.82□□□□□ -1
PUP1YOR157C PRM9P39551 298 aa8.82□□□□□ -1
PUP1YOR157C SAP185P40856 1058 aa8.82□□□□□ -1
PUP1YOR157C YTP1P53584 459 aa8.82□□□□□ -1
PUP1YOR157C YDR131CQ03899 556 aa8.82□□□□□ -1
PUP1YOR157C SPO75Q07798 868 aa8.82□□□□□ -1
PUP1YOR157C YLL032CQ07834 825 aaKnown RBP RIP-Chip data8.82□□□□□ -1not detected
PUP1YOR157C AIM39Q08223 395 aa8.82□□□□□ -1
PUP1YOR157C SNT1P25357 1226 aa8.81□□□□□ -1
PUP1YOR157C SPT5P27692 1063 aaKnown RBP8.81□□□□□ -1
PUP1YOR157C PEX31P53203 462 aa8.81□□□□□ -1
PUP1YOR157C BNI4P53858 892 aa8.81□□□□□ -1
PUP1YOR157C BET4Q00618 327 aa8.81□□□□□ -1
PUP1YOR157C YPR114WQ06107 315 aa8.81□□□□□ -1
PUP1YOR157C MCP2Q06567 569 aa8.81□□□□□ -1
PUP1YOR157C GLE1Q12315 538 aa8.81□□□□□ -1
PUP1YOR157C YKR104WP0CE69 306 aa8.8□□□□□ -1
PUP1YOR157C MNE1P24720 663 aa8.8□□□□□ -1
PUP1YOR157C DBP2P24783 546 aaKnown RBP8.8□□□□□ -1
PUP1YOR157C PCA1P38360 1216 aa8.8□□□□□ -1
PUP1YOR157C CEM1P39525 442 aa8.8□□□□□ -1
PUP1YOR157C TMA108P40462 946 aa8.8□□□□□ -1
PUP1YOR157C HXT16P47185 567 aa8.8□□□□□ -1
PUP1YOR157C HXT15P54854 567 aa8.8□□□□□ -1
PUP1YOR157C YMR018WQ04364 514 aa8.8□□□□□ -1
Retrieved 100 of 5,963 RNA–protein pairs in 101.5 ms