RNA–Protein interactions for RNA: YOR138C

RUP1, Transcript of Protein that regulates ubiquitination of Rsp5p, yeastyeast

Gene RUP1, Length 2,016 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RUP1YOR138C ATG26Q06321 1198 aa7.61□□□□□ -1.19
RUP1YOR138C ATG17Q06410 417 aa7.61□□□□□ -1.19
RUP1YOR138C THI21Q08975 551 aa7.61□□□□□ -1.19
RUP1YOR138C TMA46Q12000 345 aaKnown RBP7.61□□□□□ -1.19
RUP1YOR138C RGS2Q99188 309 aa7.61□□□□□ -1.19
RUP1YOR138C RIF1P29539 1916 aa7.6□□□□□ -1.19
RUP1YOR138C CDC19P00549 500 aaKnown RBP7.6□□□□□ -1.19
RUP1YOR138C TUB1P09733 447 aaKnown RBP7.6□□□□□ -1.19
RUP1YOR138C SSA1P10591 642 aaKnown RBP7.6□□□□□ -1.19
RUP1YOR138C VBA3P25594 458 aa7.6□□□□□ -1.19
RUP1YOR138C IXR1P33417 597 aa7.6□□□□□ -1.19
RUP1YOR138C SEC66P33754 206 aa7.6□□□□□ -1.19
RUP1YOR138C KDX1P36005 433 aa7.6□□□□□ -1.19
RUP1YOR138C VBA5P36172 582 aa7.6□□□□□ -1.19
RUP1YOR138C NOP4P37838 685 aaKnown RBP7.6□□□□□ -1.19
RUP1YOR138C MPH1P40562 993 aa7.6□□□□□ -1.19
RUP1YOR138C GCN20P43535 752 aaKnown RBP7.6□□□□□ -1.19
RUP1YOR138C VMA10P48836 114 aaKnown RBP7.6□□□□□ -1.19
RUP1YOR138C SLT2Q00772 484 aa7.6□□□□□ -1.19
RUP1YOR138C ASA1Q06822 443 aa7.6□□□□□ -1.19
RUP1YOR138C TPO1Q07824 586 aa7.6□□□□□ -1.19
RUP1YOR138C MDM20Q12387 796 aaKnown RBP7.6□□□□□ -1.19
RUP1YOR138C MPH2P0CD99 609 aa7.59□□□□□ -1.19
RUP1YOR138C RGR1P19263 1082 aa7.59□□□□□ -1.19
RUP1YOR138C AMS1P22855 1083 aa7.59□□□□□ -1.19
RUP1YOR138C GID7P25569 745 aa7.59□□□□□ -1.19
RUP1YOR138C ZIP1P31111 875 aa7.59□□□□□ -1.19
RUP1YOR138C SEC31P38968 1273 aaKnown RBP7.59□□□□□ -1.19
RUP1YOR138C DSE1P40077 573 aa7.59□□□□□ -1.19
RUP1YOR138C YGR283CP53336 341 aaPredicted RBP7.59□□□□□ -1.19
RUP1YOR138C DCP2P53550 970 aaKnown RBP7.59□□□□□ -1.19
RUP1YOR138C RCF2P53721 224 aa7.59□□□□□ -1.19
RUP1YOR138C YNL011CP53980 444 aa7.59□□□□□ -1.19
RUP1YOR138C YMR321CQ04898 105 aa7.59□□□□□ -1.19
RUP1YOR138C FMP25Q08023 583 aa7.59□□□□□ -1.19
RUP1YOR138C PEX15Q08215 383 aa7.59□□□□□ -1.19
RUP1YOR138C KCS1Q12494 1050 aa7.59□□□□□ -1.19
RUP1YOR138C AI5_ALPHAQ9ZZX1 630 aa7.59□□□□□ -1.19
RUP1YOR138C SEM1O94742 89 aa7.59□□□□□ -1.19
RUP1YOR138C NPL6P32832 435 aa7.59□□□□□ -1.19
RUP1YOR138C DEF1P35732 738 aaKnown RBP7.59□□□□□ -1.19
RUP1YOR138C GUA1P38625 525 aaKnown RBP7.59□□□□□ -1.19
RUP1YOR138C VPS29P38759 282 aa7.59□□□□□ -1.19
RUP1YOR138C ERP2P39704 215 aa7.59□□□□□ -1.19
RUP1YOR138C GPB2P39717 880 aa7.59□□□□□ -1.19
RUP1YOR138C ARC1P46672 376 aaKnown RBP7.59□□□□□ -1.19
RUP1YOR138C TEL2P53038 688 aa7.59□□□□□ -1.19
RUP1YOR138C YGR127WP53275 312 aa7.59□□□□□ -1.19
RUP1YOR138C TAF11Q04226 346 aa7.59□□□□□ -1.19
RUP1YOR138C FAR10Q06001 478 aa7.59□□□□□ -1.19
RUP1YOR138C YPR027CQ12079 277 aa7.59□□□□□ -1.19
RUP1YOR138C IZH4Q99393 312 aa7.59□□□□□ -1.19
RUP1YOR138C MOT1P32333 1867 aa7.58□□□□□ -1.2
RUP1YOR138C YPR089WO13585 888 aa7.58□□□□□ -1.2
RUP1YOR138C PHA2P32452 334 aa7.58□□□□□ -1.2
RUP1YOR138C SPT16P32558 1035 aaKnown RBP7.58□□□□□ -1.2
RUP1YOR138C SPC42P36094 363 aa7.58□□□□□ -1.2
RUP1YOR138C YMC2P38087 329 aa7.58□□□□□ -1.2
RUP1YOR138C HSL7P38274 827 aa7.58□□□□□ -1.2
RUP1YOR138C GGA2P38817 585 aaKnown RBP7.58□□□□□ -1.2
RUP1YOR138C CRP1P38845 465 aaKnown RBP7.58□□□□□ -1.2
RUP1YOR138C NPT1P39683 429 aaKnown RBP7.58□□□□□ -1.2
RUP1YOR138C YFL040WP43562 540 aa7.58□□□□□ -1.2
RUP1YOR138C ULI1P43604 169 aa7.58□□□□□ -1.2
RUP1YOR138C SET2P46995 733 aaKnown RBP7.58□□□□□ -1.2
RUP1YOR138C DAN4P47179 1161 aa7.58□□□□□ -1.2
RUP1YOR138C NMA2P53204 395 aa7.58□□□□□ -1.2
RUP1YOR138C ASI2P53895 289 aa7.58□□□□□ -1.2
RUP1YOR138C YNL108CP53929 270 aa7.58□□□□□ -1.2
RUP1YOR138C MZM1Q03429 123 aaPredicted RBP7.58□□□□□ -1.2
RUP1YOR138C NSE1Q07913 336 aa7.58□□□□□ -1.2
RUP1YOR138C VPS54Q12071 889 aa7.58□□□□□ -1.2
RUP1YOR138C CHS5Q12114 671 aaKnown RBP7.58□□□□□ -1.2
RUP1YOR138C HRT3Q12347 344 aa7.58□□□□□ -1.2
RUP1YOR138C YEL077CQ3E7X8 1277 aa7.58□□□□□ -1.2
RUP1YOR138C PAB1P04147 577 aaKnown RBP RIP-Chip data7.57□□□□□ -1.2not detected
RUP1YOR138C ERR1P0CX10 437 aa7.57□□□□□ -1.2
RUP1YOR138C ERR2P0CX11 437 aa7.57□□□□□ -1.2
RUP1YOR138C YCL068CP25593 260 aa7.57□□□□□ -1.2
RUP1YOR138C CCR4P31384 837 aaKnown RBP7.57□□□□□ -1.2
RUP1YOR138C HSP78P33416 811 aa7.57□□□□□ -1.2
RUP1YOR138C LHS1P36016 881 aa7.57□□□□□ -1.2
RUP1YOR138C EAP1P36041 632 aaKnown RBP7.57□□□□□ -1.2
RUP1YOR138C DBP7P36120 742 aaKnown RBP7.57□□□□□ -1.2
RUP1YOR138C CTP1P38152 299 aa7.57□□□□□ -1.2
RUP1YOR138C NMD3P38861 518 aaKnown RBP7.57□□□□□ -1.2
RUP1YOR138C LYS9P38999 446 aa7.57□□□□□ -1.2
RUP1YOR138C PIK1P39104 1066 aa7.57□□□□□ -1.2
RUP1YOR138C AIM20P40451 204 aa7.57□□□□□ -1.2
RUP1YOR138C HPM1P40481 377 aa7.57□□□□□ -1.2
RUP1YOR138C MAF1P41910 395 aa7.57□□□□□ -1.2
RUP1YOR138C ERR3P42222 437 aa7.57□□□□□ -1.2
RUP1YOR138C LAM5P43560 674 aa7.57□□□□□ -1.2
RUP1YOR138C SAD1P43589 448 aa7.57□□□□□ -1.2
RUP1YOR138C YJR054WP47114 497 aa7.57□□□□□ -1.2
RUP1YOR138C PRO2P54885 456 aaKnown RBP7.57□□□□□ -1.2
RUP1YOR138C DOT1Q04089 582 aaKnown RBP7.57□□□□□ -1.2
RUP1YOR138C CDD1Q06549 142 aa7.57□□□□□ -1.2
RUP1YOR138C DIS3Q08162 1001 aaKnown RBP7.57□□□□□ -1.2
RUP1YOR138C THI20Q08224 551 aa7.57□□□□□ -1.2
Retrieved 100 of 5,963 RNA–protein pairs in 14.4 ms