RNA–Protein interactions for RNA: YOL038W

PRE6, Transcript of Alpha 4 subunit of the 20S proteasome, yeastyeast

Gene PRE6, Length 765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE6YOL038W APL4Q12028 832 aa10.98□□□□□ -0.65
PRE6YOL038W KAR9P32526 644 aa10.97□□□□□ -0.65
PRE6YOL038W TFB1P32776 642 aa10.97□□□□□ -0.65
PRE6YOL038W STL1P39932 569 aa10.97□□□□□ -0.65
PRE6YOL038W INP2Q03824 705 aa10.97□□□□□ -0.65
PRE6YOL038W CLP1Q08685 445 aaPredicted RBP10.97□□□□□ -0.65
PRE6YOL038W CIR2Q08822 631 aa10.97□□□□□ -0.65
PRE6YOL038W IZH4Q99393 312 aa10.97□□□□□ -0.65
PRE6YOL038W ERG11P10614 530 aa10.96□□□□□ -0.65
PRE6YOL038W APM3P38153 483 aa10.96□□□□□ -0.65
PRE6YOL038W PFS1P38872 237 aa10.96□□□□□ -0.65
PRE6YOL038W SMC2P38989 1170 aaKnown RBP10.96□□□□□ -0.65
PRE6YOL038W ERP2P39704 215 aa10.96□□□□□ -0.65
PRE6YOL038W YJR061WP40355 935 aa10.96□□□□□ -0.65
PRE6YOL038W REF2P42073 533 aaPredicted RBP10.96□□□□□ -0.65
PRE6YOL038W MNN10P50108 393 aaKnown RBP10.96□□□□□ -0.65
PRE6YOL038W YGL140CP53120 1219 aa10.96□□□□□ -0.65
PRE6YOL038W YNL040WP53960 456 aaPredicted RBP10.96□□□□□ -0.65
PRE6YOL038W SYH1Q02875 849 aaKnown RBP10.96□□□□□ -0.65
PRE6YOL038W SND1Q04007 877 aa10.96□□□□□ -0.65
PRE6YOL038W YCR015CP25616 317 aa10.95□□□□□ -0.66
PRE6YOL038W MRPL40P36534 297 aa10.95□□□□□ -0.66
PRE6YOL038W NRD1P53617 575 aaKnown RBP RIP-Chip data10.95□□□□□ -0.66not detected
PRE6YOL038W ERG5P54781 538 aa10.95□□□□□ -0.66
PRE6YOL038W RPL34AP87262 121 aaPredicted RBP10.95□□□□□ -0.66
PRE6YOL038W PEX11Q12462 236 aa10.95□□□□□ -0.66
PRE6YOL038W PXA2P34230 853 aa10.94□□□□□ -0.66
PRE6YOL038W ALY1P36117 915 aa10.94□□□□□ -0.66
PRE6YOL038W VAC8P39968 578 aa10.94□□□□□ -0.66
PRE6YOL038W TIF34P40217 347 aaKnown RBP10.94□□□□□ -0.66
PRE6YOL038W TRF5P48561 642 aaKnown RBP10.94□□□□□ -0.66
PRE6YOL038W AIM14P53109 570 aa10.94□□□□□ -0.66
PRE6YOL038W YGR021WP53212 290 aa10.94□□□□□ -0.66
PRE6YOL038W DOS2P54858 310 aa10.94□□□□□ -0.66
PRE6YOL038W DIG1Q03063 452 aaKnown RBP10.94□□□□□ -0.66
PRE6YOL038W STB3Q12427 513 aa10.94□□□□□ -0.66
PRE6YOL038W OCA6Q12454 224 aa10.94□□□□□ -0.66
PRE6YOL038W NAG1Q8TGN9 163 aa10.94□□□□□ -0.66
PRE6YOL038W CLC1P17891 233 aa10.93□□□□□ -0.66
PRE6YOL038W YEL028WP39989 153 aa10.93□□□□□ -0.66
PRE6YOL038W ATM1P40416 690 aa10.93□□□□□ -0.66
PRE6YOL038W YPS6P40583 537 aa10.93□□□□□ -0.66
PRE6YOL038W BRO1P48582 844 aa10.93□□□□□ -0.66
PRE6YOL038W COQ5P49017 307 aa10.93□□□□□ -0.66
PRE6YOL038W PRM1P53835 661 aa10.93□□□□□ -0.66
PRE6YOL038W YNL108CP53929 270 aa10.93□□□□□ -0.66
PRE6YOL038W ERV41Q04651 352 aa10.93□□□□□ -0.66
PRE6YOL038W YPR148CQ06523 435 aa10.93□□□□□ -0.66
PRE6YOL038W SWC7Q06707 132 aa10.93□□□□□ -0.66
PRE6YOL038W SAM4Q08985 325 aaKnown RBP10.93□□□□□ -0.66
PRE6YOL038W GPM3Q12326 303 aa10.93□□□□□ -0.66
PRE6YOL038W AFI1Q99222 893 aa10.93□□□□□ -0.66
PRE6YOL038W BRR2P32639 2163 aaKnown RBP10.93□□□□□ -0.66
PRE6YOL038W RAD10P06838 210 aa10.92□□□□□ -0.66
PRE6YOL038W PYC1P11154 1178 aaKnown RBP10.92□□□□□ -0.66
PRE6YOL038W MRPL8P22353 238 aa10.92□□□□□ -0.66
PRE6YOL038W SPC110P32380 944 aa10.92□□□□□ -0.66
PRE6YOL038W SLX5P32828 619 aaKnown RBP10.92□□□□□ -0.66
PRE6YOL038W PMT1P33775 817 aa10.92□□□□□ -0.66
PRE6YOL038W SRP68P38687 599 aaKnown RBP10.92□□□□□ -0.66
PRE6YOL038W PAN6P40459 309 aa10.92□□□□□ -0.66
PRE6YOL038W RPS10BP46784 105 aaKnown RBP10.92□□□□□ -0.66
PRE6YOL038W NOG2P53742 486 aaKnown RBP10.92□□□□□ -0.66
PRE6YOL038W CLU1Q03690 1277 aaKnown RBP10.92□□□□□ -0.66
PRE6YOL038W YMR018WQ04364 514 aa10.92□□□□□ -0.66
PRE6YOL038W UFO1Q04511 668 aa10.92□□□□□ -0.66
PRE6YOL038W GRX8Q05926 109 aa10.92□□□□□ -0.66
PRE6YOL038W KAP95Q06142 861 aaKnown RBP10.92□□□□□ -0.66
PRE6YOL038W YLR001CQ07895 862 aa10.92□□□□□ -0.66
PRE6YOL038W RPS10AQ08745 105 aaPredicted RBP10.92□□□□□ -0.66
PRE6YOL038W MIS1P09440 975 aaKnown RBP10.91□□□□□ -0.66
PRE6YOL038W YHR078WP38799 552 aa10.91□□□□□ -0.66
PRE6YOL038W DLD2P46681 530 aaKnown RBP10.91□□□□□ -0.66
PRE6YOL038W ALY2P47029 1046 aa10.91□□□□□ -0.66
PRE6YOL038W MTO1P53070 669 aa10.91□□□□□ -0.66
PRE6YOL038W IVY1Q04934 453 aa10.91□□□□□ -0.66
PRE6YOL038W OPI10Q08202 246 aa10.91□□□□□ -0.66
PRE6YOL038W LEU1P07264 779 aaKnown RBP10.9□□□□□ -0.66
PRE6YOL038W MTF2P10849 440 aa10.9□□□□□ -0.66
PRE6YOL038W RAD57P25301 460 aa10.9□□□□□ -0.66
PRE6YOL038W RRP43P25359 394 aaPredicted RBP10.9□□□□□ -0.66
PRE6YOL038W CIN8P27895 1000 aa10.9□□□□□ -0.66
PRE6YOL038W MEI4P29467 408 aa10.9□□□□□ -0.66
PRE6YOL038W ADD66P36040 267 aa10.9□□□□□ -0.66
PRE6YOL038W BIT2P38346 545 aa10.9□□□□□ -0.66
PRE6YOL038W HIS2P38635 335 aa10.9□□□□□ -0.66
PRE6YOL038W MNT2P53059 558 aa10.9□□□□□ -0.66
PRE6YOL038W YGR127WP53275 312 aa10.9□□□□□ -0.66
PRE6YOL038W SNO2P53823 222 aa10.9□□□□□ -0.66
PRE6YOL038W Q0182Q9ZZW1 134 aa10.9□□□□□ -0.66
PRE6YOL038W SST2P11972 698 aaKnown RBP10.89□□□□□ -0.67
PRE6YOL038W AAT2P23542 418 aaKnown RBP10.89□□□□□ -0.67
PRE6YOL038W DBF4P32325 704 aa10.89□□□□□ -0.67
PRE6YOL038W TYE7P33122 291 aaPredicted RBP10.89□□□□□ -0.67
PRE6YOL038W FUI1P38196 639 aa10.89□□□□□ -0.67
PRE6YOL038W RRT2P38332 387 aa10.89□□□□□ -0.67
PRE6YOL038W OCA5P38738 679 aa10.89□□□□□ -0.67
PRE6YOL038W AIM18P38884 321 aa10.89□□□□□ -0.67
PRE6YOL038W COG7P53195 279 aa10.89□□□□□ -0.67
PRE6YOL038W ORC3P54790 616 aa10.89□□□□□ -0.67
Retrieved 100 of 5,963 RNA–protein pairs in 29.6 ms