RNA–Protein interactions for RNA: YNL242W

ATG2, Transcript of Peripheral membrane protein required for autophagic vesicle formation, yeast

Gene ATG2, Length 4,779 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATG2	YNL242W	UBP5	P39944	805 aa		4.09	□□□□□ -1.76
ATG2	YNL242W	ACA1	P39970	489 aa		4.09	□□□□□ -1.76
ATG2	YNL242W	YFL066C	P43538	392 aa		4.09	□□□□□ -1.76
ATG2	YNL242W	PAN2	P53010	1115 aa	Predicted RBP	4.09	□□□□□ -1.76
ATG2	YNL242W	RET3	P53600	189 aa		4.09	□□□□□ -1.76
ATG2	YNL242W	ORC3	P54790	616 aa		4.09	□□□□□ -1.76
ATG2	YNL242W	RPN9	Q04062	393 aa	Known RBP	4.09	□□□□□ -1.76
ATG2	YNL242W	SSQ1	Q05931	657 aa	Predicted RBP	4.09	□□□□□ -1.76
ATG2	YNL242W	YET3	Q07451	203 aa		4.09	□□□□□ -1.76
ATG2	YNL242W	YEL076C-A	P0CX16	216 aa		4.08	□□□□□ -1.76
ATG2	YNL242W	YLR464W	P0CX17	216 aa		4.08	□□□□□ -1.76
ATG2	YNL242W	CDC24	P11433	854 aa	Predicted RBP	4.08	□□□□□ -1.76
ATG2	YNL242W	BUD23	P25627	275 aa	Predicted RBP	4.08	□□□□□ -1.76
ATG2	YNL242W	YDR089W	P38966	869 aa		4.08	□□□□□ -1.76
ATG2	YNL242W	RGA1	P39083	1007 aa		4.08	□□□□□ -1.76
ATG2	YNL242W	YEL076C	P39971	216 aa		4.08	□□□□□ -1.76
ATG2	YNL242W	MDE1	P47095	244 aa		4.08	□□□□□ -1.76
ATG2	YNL242W	ASI3	P53983	676 aa		4.08	□□□□□ -1.76
ATG2	YNL242W	MF(ALPHA)1	P01149	165 aa		4.08	□□□□□ -1.76
ATG2	YNL242W	COR1	P07256	457 aa		4.08	□□□□□ -1.76
ATG2	YNL242W	EXO70	P19658	623 aa		4.08	□□□□□ -1.76
ATG2	YNL242W	HSP60	P19882	572 aa	Known RBP	4.08	□□□□□ -1.76
ATG2	YNL242W	EUG1	P32474	517 aa		4.08	□□□□□ -1.76
ATG2	YNL242W	BOL3	P39724	118 aa		4.08	□□□□□ -1.76
ATG2	YNL242W	DIE2	P50076	525 aa		4.08	□□□□□ -1.76
ATG2	YNL242W	DAK1	P54838	584 aa	Known RBP	4.08	□□□□□ -1.76
ATG2	YNL242W	REX2	P54964	269 aa	Known RBP	4.08	□□□□□ -1.76
ATG2	YNL242W	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	4.08	□□□□□ -1.76	RIP-Chip
ATG2	YNL242W	RSB1	Q08417	382 aa		4.08	□□□□□ -1.76
ATG2	YNL242W	SCM3	Q12334	223 aa		4.08	□□□□□ -1.76
ATG2	YNL242W	SUP45	P12385	437 aa	Known RBP	4.08	□□□□□ -1.76
ATG2	YNL242W	PEP5	P12868	1029 aa		4.08	□□□□□ -1.76
ATG2	YNL242W	YAP1	P19880	650 aa	Known RBP	4.08	□□□□□ -1.76
ATG2	YNL242W	AEP2	P22136	580 aa		4.08	□□□□□ -1.76
ATG2	YNL242W	ADP1	P25371	1049 aa		4.08	□□□□□ -1.76
ATG2	YNL242W	MCM5	P29496	775 aa	Known RBP	4.08	□□□□□ -1.76
ATG2	YNL242W	THI6	P41835	540 aa		4.08	□□□□□ -1.76
ATG2	YNL242W	HOS2	P53096	452 aa	Predicted RBP	4.08	□□□□□ -1.76
ATG2	YNL242W	MPS2	P53159	387 aa		4.08	□□□□□ -1.76
ATG2	YNL242W	TAF12	Q03761	539 aa		4.08	□□□□□ -1.76
ATG2	YNL242W	DBP9	Q06218	594 aa	Known RBP	4.08	□□□□□ -1.76
ATG2	YNL242W	PEX15	Q08215	383 aa		4.08	□□□□□ -1.76
ATG2	YNL242W	DSE3	Q08729	430 aa		4.08	□□□□□ -1.76
ATG2	YNL242W	NCR1	Q12200	1170 aa		4.08	□□□□□ -1.76
ATG2	YNL242W	RRP5	Q05022	1729 aa	Known RBP	4.08	□□□□□ -1.76
ATG2	YNL242W	HEM15	P16622	393 aa		4.07	□□□□□ -1.76
ATG2	YNL242W	DOM34	P33309	386 aa		4.07	□□□□□ -1.76
ATG2	YNL242W	DUG2	P38149	878 aa		4.07	□□□□□ -1.76
ATG2	YNL242W	TDP1	P38319	544 aa		4.07	□□□□□ -1.76
ATG2	YNL242W	MIG2	P53035	382 aa		4.07	□□□□□ -1.76
ATG2	YNL242W	COG5	P53951	403 aa		4.07	□□□□□ -1.76
ATG2	YNL242W	RPA49	Q01080	415 aa	Predicted RBP	4.07	□□□□□ -1.76
ATG2	YNL242W	FOX2	Q02207	900 aa	Known RBP	4.07	□□□□□ -1.76
ATG2	YNL242W	ADI1	Q03677	179 aa		4.07	□□□□□ -1.76
ATG2	YNL242W	UFO1	Q04511	668 aa		4.07	□□□□□ -1.76
ATG2	YNL242W	GYP1	Q08484	637 aa		4.07	□□□□□ -1.76
ATG2	YNL242W	ATG29	Q12092	213 aa		4.07	□□□□□ -1.76
ATG2	YNL242W	GET4	Q12125	312 aa		4.07	□□□□□ -1.76
ATG2	YNL242W	LDB17	Q12342	491 aa		4.07	□□□□□ -1.76
ATG2	YNL242W	SPE4	Q12455	300 aa		4.07	□□□□□ -1.76
ATG2	YNL242W	CYB2	P00175	591 aa		4.07	□□□□□ -1.76
ATG2	YNL242W	HEM1	P09950	548 aa	Predicted RBP	4.07	□□□□□ -1.76
ATG2	YNL242W	FUS1	P11710	512 aa		4.07	□□□□□ -1.76
ATG2	YNL242W	OCA4	P25366	362 aa		4.07	□□□□□ -1.76
ATG2	YNL242W	VAC17	P25591	423 aa		4.07	□□□□□ -1.76
ATG2	YNL242W	KIP2	P28743	706 aa		4.07	□□□□□ -1.76
ATG2	YNL242W	EAP1	P36041	632 aa	Known RBP	4.07	□□□□□ -1.76
ATG2	YNL242W	ALD5	P40047	520 aa	Known RBP	4.07	□□□□□ -1.76
ATG2	YNL242W	HPM1	P40481	377 aa		4.07	□□□□□ -1.76
ATG2	YNL242W	PEX8	P53248	589 aa		4.07	□□□□□ -1.76
ATG2	YNL242W	HXT15	P54854	567 aa		4.07	□□□□□ -1.76
ATG2	YNL242W	PRO2	P54885	456 aa	Known RBP	4.07	□□□□□ -1.76
ATG2	YNL242W	ADE13	Q05911	482 aa	Known RBP	4.07	□□□□□ -1.76
ATG2	YNL242W	ATG20	Q07528	640 aa		4.07	□□□□□ -1.76
ATG2	YNL242W	IWR1	Q07532	353 aa	Predicted RBP	4.07	□□□□□ -1.76
ATG2	YNL242W	LOT6	Q07923	191 aa		4.07	□□□□□ -1.76
ATG2	YNL242W	DNL4	Q08387	944 aa	Predicted RBP	4.07	□□□□□ -1.76
ATG2	YNL242W	FAP7	Q12055	197 aa	Predicted RBP	4.07	□□□□□ -1.76
ATG2	YNL242W	YRF1-2	P40105	1681 aa		4.07	□□□□□ -1.76
ATG2	YNL242W	SNF1	P06782	633 aa	Known RBP	4.07	□□□□□ -1.76
ATG2	YNL242W	PUT2	P07275	575 aa		4.07	□□□□□ -1.76
ATG2	YNL242W	SAN1	P22470	610 aa		4.07	□□□□□ -1.76
ATG2	YNL242W	CCR4	P31384	837 aa	Known RBP	4.07	□□□□□ -1.76
ATG2	YNL242W	TPS2	P31688	896 aa	Known RBP	4.07	□□□□□ -1.76
ATG2	YNL242W	TRM2	P33753	639 aa		4.07	□□□□□ -1.76
ATG2	YNL242W	ETR1	P38071	380 aa		4.07	□□□□□ -1.76
ATG2	YNL242W	FCY21	P40039	528 aa		4.07	□□□□□ -1.76
ATG2	YNL242W	GCV2	P49095	1034 aa		4.07	□□□□□ -1.76
ATG2	YNL242W	IMP4	P53941	290 aa	Known RBP	4.07	□□□□□ -1.76
ATG2	YNL242W	ERO1	Q03103	563 aa		4.07	□□□□□ -1.76
ATG2	YNL242W	YDR239C	Q03780	787 aa		4.07	□□□□□ -1.76
ATG2	YNL242W	SMP3	Q04174	516 aa		4.07	□□□□□ -1.76
ATG2	YNL242W	FAL1	Q12099	399 aa	Known RBP	4.07	□□□□□ -1.76
ATG2	YNL242W	RRP36	Q12481	300 aa	Predicted RBP	4.07	□□□□□ -1.76
ATG2	YNL242W	SIT4	P20604	311 aa		4.07	□□□□□ -1.76
ATG2	YNL242W	RAD54	P32863	898 aa		4.07	□□□□□ -1.76
ATG2	YNL242W	GIP1	P38229	639 aa		4.07	□□□□□ -1.76
ATG2	YNL242W	CCT3	P39077	534 aa	Known RBP	4.07	□□□□□ -1.76
ATG2	YNL242W	UTP18	P40362	594 aa	Predicted RBP	4.07	□□□□□ -1.76
ATG2	YNL242W	PAC11	P40960	533 aa		4.07	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 41.6 ms