RNA–Protein interactions for RNA: YMR017W

SPO20, Transcript of Meiosis-specific subunit of the t-SNARE complex, yeast

Gene SPO20, Length 1,194 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPO20	YMR017W	HIM1	Q06674	414 aa		5.23	□□□□□ -1.57
SPO20	YMR017W	CRD1	Q07560	283 aa		5.23	□□□□□ -1.57
SPO20	YMR017W	AAD4	Q07747	329 aa		5.23	□□□□□ -1.57
SPO20	YMR017W	RPA135	P22138	1203 aa	Known RBP	5.22	□□□□□ -1.57
SPO20	YMR017W	SAT4	P25333	603 aa	Known RBP	5.22	□□□□□ -1.57
SPO20	YMR017W	RPS7A	P26786	190 aa	Known RBP	5.22	□□□□□ -1.57
SPO20	YMR017W	PPZ2	P33329	710 aa		5.22	□□□□□ -1.57
SPO20	YMR017W	APM3	P38153	483 aa		5.22	□□□□□ -1.57
SPO20	YMR017W	SDH8	P38345	138 aa		5.22	□□□□□ -1.57
SPO20	YMR017W	STT3	P39007	718 aa	Known RBP	5.22	□□□□□ -1.57
SPO20	YMR017W	SAP4	P53036	818 aa		5.22	□□□□□ -1.57
SPO20	YMR017W	YGL117W	P53133	265 aa		5.22	□□□□□ -1.57
SPO20	YMR017W	COQ6	P53318	479 aa		5.22	□□□□□ -1.57
SPO20	YMR017W	CPA2	P03965	1118 aa	Known RBP	5.21	□□□□□ -1.58
SPO20	YMR017W	PGI1	P12709	554 aa	Known RBP	5.21	□□□□□ -1.58
SPO20	YMR017W	PRE2	P30656	287 aa	Known RBP	5.21	□□□□□ -1.58
SPO20	YMR017W	IDS2	P46958	469 aa		5.21	□□□□□ -1.58
SPO20	YMR017W	PAP2	P53632	584 aa	Known RBP	5.21	□□□□□ -1.58
SPO20	YMR017W	GIS1	Q03833	894 aa		5.21	□□□□□ -1.58
SPO20	YMR017W	CTT1	P06115	562 aa		5.2	□□□□□ -1.58
SPO20	YMR017W	WHI2	P12611	486 aa		5.2	□□□□□ -1.58
SPO20	YMR017W	UGP1	P32861	499 aa	Known RBP	5.2	□□□□□ -1.58
SPO20	YMR017W	YPT10	P38146	199 aa		5.2	□□□□□ -1.58
SPO20	YMR017W	PAC2	P39937	518 aa		5.2	□□□□□ -1.58
SPO20	YMR017W	VPS64	Q03944	604 aa		5.2	□□□□□ -1.58
SPO20	YMR017W	BNR1	P40450	1375 aa		5.19	□□□□□ -1.58
SPO20	YMR017W	LEU2	P04173	364 aa	Predicted RBP	5.19	□□□□□ -1.58
SPO20	YMR017W	PHO81	P17442	1178 aa		5.19	□□□□□ -1.58
SPO20	YMR017W	SEC18	P18759	758 aa	Known RBP	5.19	□□□□□ -1.58
SPO20	YMR017W	RNR3	P21672	869 aa	Known RBP	5.19	□□□□□ -1.58
SPO20	YMR017W	SIR1	P21691	654 aa		5.19	□□□□□ -1.58
SPO20	YMR017W	MSH1	P25846	959 aa		5.19	□□□□□ -1.58
SPO20	YMR017W	YMC1	P32331	307 aa		5.19	□□□□□ -1.58
SPO20	YMR017W	CDC5	P32562	705 aa		5.19	□□□□□ -1.58
SPO20	YMR017W	FRD1	P32614	470 aa	Known RBP	5.19	□□□□□ -1.58
SPO20	YMR017W	SPC72	P39723	622 aa		5.19	□□□□□ -1.58
SPO20	YMR017W	VPS27	P40343	622 aa	Known RBP	5.19	□□□□□ -1.58
SPO20	YMR017W	ARG7	Q04728	441 aa		5.19	□□□□□ -1.58
SPO20	YMR017W	EIS1	Q05050	843 aa	Known RBP	5.19	□□□□□ -1.58
SPO20	YMR017W	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	5.19	□□□□□ -1.58	not detected
SPO20	YMR017W	ULA1	Q12059	462 aa		5.19	□□□□□ -1.58
SPO20	YMR017W	YPK1	P12688	680 aa	Known RBP	5.18	□□□□□ -1.58
SPO20	YMR017W	POL3	P15436	1097 aa		5.18	□□□□□ -1.58
SPO20	YMR017W	APA1	P16550	321 aa	Known RBP	5.18	□□□□□ -1.58
SPO20	YMR017W	RIX1	P38883	763 aa	Predicted RBP	5.18	□□□□□ -1.58
SPO20	YMR017W	GFD1	Q04839	188 aa	Known RBP	5.18	□□□□□ -1.58
SPO20	YMR017W	ARO10	Q06408	635 aa		5.18	□□□□□ -1.58
SPO20	YMR017W	AAC1	P04710	309 aa		5.17	□□□□□ -1.58
SPO20	YMR017W	RPL7A	P05737	244 aa	Known RBP	5.17	□□□□□ -1.58
SPO20	YMR017W	ADE5,7	P07244	802 aa	Known RBP	5.17	□□□□□ -1.58
SPO20	YMR017W	PMA2	P19657	947 aa		5.17	□□□□□ -1.58
SPO20	YMR017W	YCR061W	P25639	631 aa		5.17	□□□□□ -1.58
SPO20	YMR017W	CPR6	P53691	371 aa	Known RBP	5.17	□□□□□ -1.58
SPO20	YMR017W	IWR1	Q07532	353 aa	Predicted RBP	5.17	□□□□□ -1.58
SPO20	YMR017W	CRT10	Q08226	957 aa		5.17	□□□□□ -1.58
SPO20	YMR017W	RPL7B	Q12213	244 aa	Known RBP	5.17	□□□□□ -1.58
SPO20	YMR017W	TAD3	Q9URQ3	322 aa		5.17	□□□□□ -1.58
SPO20	YMR017W	TUB1	P09733	447 aa	Known RBP	5.16	□□□□□ -1.58
SPO20	YMR017W	RIT1	P23796	513 aa		5.16	□□□□□ -1.58
SPO20	YMR017W	MCM3	P24279	971 aa	Known RBP	5.16	□□□□□ -1.58
SPO20	YMR017W	ILV6	P25605	309 aa	Known RBP	5.16	□□□□□ -1.58
SPO20	YMR017W	AAD3	P25612	363 aa		5.16	□□□□□ -1.58
SPO20	YMR017W	FLO10	P36170	1169 aa		5.16	□□□□□ -1.58
SPO20	YMR017W	ACA1	P39970	489 aa		5.16	□□□□□ -1.58
SPO20	YMR017W	ARB1	P40024	610 aa	Known RBP	5.16	□□□□□ -1.58
SPO20	YMR017W	ESF2	P53743	316 aa	Known RBP	5.16	□□□□□ -1.58
SPO20	YMR017W	FMP30	Q02883	468 aa		5.16	□□□□□ -1.58
SPO20	YMR017W	CRF1	Q04930	467 aa		5.16	□□□□□ -1.58
SPO20	YMR017W	AIM6	Q07716	390 aa		5.16	□□□□□ -1.58
SPO20	YMR017W	PCL8	Q08966	492 aa		5.16	□□□□□ -1.58
SPO20	YMR017W	ADE3	P07245	946 aa	Known RBP	5.15	□□□□□ -1.59
SPO20	YMR017W	SWI4	P25302	1093 aa	Known RBP	5.15	□□□□□ -1.59
SPO20	YMR017W	LNP1	P38878	278 aa		5.15	□□□□□ -1.59
SPO20	YMR017W	RPT2	P40327	437 aa	Known RBP	5.15	□□□□□ -1.59
SPO20	YMR017W	CAB2	P40506	365 aa		5.15	□□□□□ -1.59
SPO20	YMR017W	YFL015C	P43578	164 aa		5.15	□□□□□ -1.59
SPO20	YMR017W	YNL092W	P53934	400 aa		5.15	□□□□□ -1.59
SPO20	YMR017W	WAR1	Q03631	944 aa		5.15	□□□□□ -1.59
SPO20	YMR017W	ARA2	Q04212	335 aa		5.15	□□□□□ -1.59
SPO20	YMR017W	ICL2	Q12031	575 aa		5.15	□□□□□ -1.59
SPO20	YMR017W	YER175W-A	Q8TGU4	54 aa		5.15	□□□□□ -1.59
SPO20	YMR017W	MIS1	P09440	975 aa	Known RBP	5.14	□□□□□ -1.59
SPO20	YMR017W	MRPL9	P31334	269 aa		5.14	□□□□□ -1.59
SPO20	YMR017W	ARO9	P38840	513 aa	Predicted RBP	5.14	□□□□□ -1.59
SPO20	YMR017W	SEC3	P33332	1336 aa	Known RBP	5.14	□□□□□ -1.59
SPO20	YMR017W	HEM1	P09950	548 aa	Predicted RBP	5.13	□□□□□ -1.59
SPO20	YMR017W	MSM1	P22438	575 aa		5.13	□□□□□ -1.59
SPO20	YMR017W	GDA1	P32621	518 aa		5.13	□□□□□ -1.59
SPO20	YMR017W	YML119W	Q03208	357 aa		5.13	□□□□□ -1.59
SPO20	YMR017W	SLK19	Q08581	821 aa	Known RBP	5.13	□□□□□ -1.59
SPO20	YMR017W	YMR084W	A2P2R3	262 aa		5.12	□□□□□ -1.59
SPO20	YMR017W	AMD2	P22580	549 aa		5.12	□□□□□ -1.59
SPO20	YMR017W	PEX2	P32800	271 aa		5.12	□□□□□ -1.59
SPO20	YMR017W	VPS24	P36095	224 aa	Known RBP	5.12	□□□□□ -1.59
SPO20	YMR017W	MTG2	P38860	518 aa		5.12	□□□□□ -1.59
SPO20	YMR017W	MAM1	P40065	302 aa		5.12	□□□□□ -1.59
SPO20	YMR017W	PUG1	P40100	303 aa		5.12	□□□□□ -1.59
SPO20	YMR017W	ATG16	Q03818	150 aa		5.12	□□□□□ -1.59
SPO20	YMR017W	VMS1	Q04311	632 aa	Known RBP	5.12	□□□□□ -1.59
SPO20	YMR017W	AHA1	Q12449	350 aa	Known RBP	5.12	□□□□□ -1.59

Retrieved 100 of 5,963 RNA–protein pairs in 21.9 ms