RNA–Protein interactions for RNA: YLR440C

SEC39, Transcript of Component of the Dsl1p tethering complex, yeast

Gene SEC39, Length 2,130 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEC39	YLR440C	LCB5	Q06147	687 aa	Known RBP	5.15	□□□□□ -1.59
SEC39	YLR440C	YFT2	Q06676	274 aa		5.15	□□□□□ -1.59
SEC39	YLR440C	KEL3	Q08979	651 aa	Predicted RBP	5.15	□□□□□ -1.59
SEC39	YLR440C	RBD2	Q12270	262 aa		5.15	□□□□□ -1.59
SEC39	YLR440C	CYT1	P07143	309 aa		5.14	□□□□□ -1.59
SEC39	YLR440C	CBP3	P21560	335 aa		5.14	□□□□□ -1.59
SEC39	YLR440C	MIH1	P23748	554 aa		5.14	□□□□□ -1.59
SEC39	YLR440C	CAD1	P24813	409 aa	Known RBP	5.14	□□□□□ -1.59
SEC39	YLR440C	RPS7A	P26786	190 aa	Known RBP	5.14	□□□□□ -1.59
SEC39	YLR440C	TYE7	P33122	291 aa	Predicted RBP	5.14	□□□□□ -1.59
SEC39	YLR440C	YHR054C	P38780	354 aa		5.14	□□□□□ -1.59
SEC39	YLR440C	FLC2	P39719	783 aa		5.14	□□□□□ -1.59
SEC39	YLR440C	IRC6	P43615	237 aa		5.14	□□□□□ -1.59
SEC39	YLR440C	LOH1	P47055	219 aa		5.14	□□□□□ -1.59
SEC39	YLR440C	NIT3	P49954	291 aa		5.14	□□□□□ -1.59
SEC39	YLR440C	YNR068C	P53754	272 aa		5.14	□□□□□ -1.59
SEC39	YLR440C	EMI2	Q04409	500 aa	Known RBP	5.14	□□□□□ -1.59
SEC39	YLR440C	GIM5	Q04493	163 aa		5.14	□□□□□ -1.59
SEC39	YLR440C	YCS4	Q06156	1176 aa		5.14	□□□□□ -1.59
SEC39	YLR440C	YLR455W	Q06188	304 aa		5.14	□□□□□ -1.59
SEC39	YLR440C	RGA2	Q06407	1009 aa		5.14	□□□□□ -1.59
SEC39	YLR440C	INP54	Q08227	384 aa	Known RBP	5.14	□□□□□ -1.59
SEC39	YLR440C	SOG2	Q08817	791 aa		5.14	□□□□□ -1.59
SEC39	YLR440C	HOS1	Q12214	470 aa		5.14	□□□□□ -1.59
SEC39	YLR440C	TRP5	P00931	707 aa	Known RBP	5.14	□□□□□ -1.59
SEC39	YLR440C	RAP1	P11938	827 aa		5.14	□□□□□ -1.59
SEC39	YLR440C	YAK1	P14680	807 aa		5.14	□□□□□ -1.59
SEC39	YLR440C	UTR1	P21373	530 aa		5.14	□□□□□ -1.59
SEC39	YLR440C	SEC62	P21825	274 aa		5.14	□□□□□ -1.59
SEC39	YLR440C	KIN3	P22209	435 aa		5.14	□□□□□ -1.59
SEC39	YLR440C	NPR1	P22211	790 aa		5.14	□□□□□ -1.59
SEC39	YLR440C	MNE1	P24720	663 aa		5.14	□□□□□ -1.59
SEC39	YLR440C	EAP1	P36041	632 aa	Known RBP	5.14	□□□□□ -1.59
SEC39	YLR440C	PCH2	P38126	564 aa		5.14	□□□□□ -1.59
SEC39	YLR440C	BSD2	P38356	321 aa		5.14	□□□□□ -1.59
SEC39	YLR440C	RPN10	P38886	268 aa	Known RBP	5.14	□□□□□ -1.59
SEC39	YLR440C	GIP4	P39732	760 aa		5.14	□□□□□ -1.59
SEC39	YLR440C	OSW5	P40219	148 aa		5.14	□□□□□ -1.59
SEC39	YLR440C	UTP25	P40498	721 aa	Known RBP	5.14	□□□□□ -1.59
SEC39	YLR440C	RTS2	P40962	232 aa		5.14	□□□□□ -1.59
SEC39	YLR440C	HLJ1	P48353	224 aa		5.14	□□□□□ -1.59
SEC39	YLR440C	PAN2	P53010	1115 aa	Predicted RBP	5.14	□□□□□ -1.59
SEC39	YLR440C	HIM1	Q06674	414 aa		5.14	□□□□□ -1.59
SEC39	YLR440C	YOS9	Q99220	542 aa		5.14	□□□□□ -1.59
SEC39	YLR440C	RIM15	P43565	1770 aa		5.13	□□□□□ -1.59
SEC39	YLR440C	PRB1	P09232	635 aa		5.13	□□□□□ -1.59
SEC39	YLR440C	PCT1	P13259	424 aa		5.13	□□□□□ -1.59
SEC39	YLR440C	CMK1	P27466	446 aa	Known RBP	5.13	□□□□□ -1.59
SEC39	YLR440C	POT1	P27796	417 aa	Known RBP RIP-Chip data	5.13	□□□□□ -1.59	not detected
SEC39	YLR440C	RPC19	P28000	142 aa	Known RBP	5.13	□□□□□ -1.59
SEC39	YLR440C	FUN30	P31380	1131 aa		5.13	□□□□□ -1.59
SEC39	YLR440C	VMA6	P32366	345 aa	Known RBP	5.13	□□□□□ -1.59
SEC39	YLR440C	PAH1	P32567	862 aa		5.13	□□□□□ -1.59
SEC39	YLR440C	RAD54	P32863	898 aa		5.13	□□□□□ -1.59
SEC39	YLR440C	LOS1	P33418	1100 aa	Predicted RBP	5.13	□□□□□ -1.59
SEC39	YLR440C	YKL069W	P36088	180 aa		5.13	□□□□□ -1.59
SEC39	YLR440C	TPA1	P40032	644 aa	Known RBP	5.13	□□□□□ -1.59
SEC39	YLR440C	MVP1	P40959	511 aa	Known RBP	5.13	□□□□□ -1.59
SEC39	YLR440C	STB2	P46679	850 aa		5.13	□□□□□ -1.59
SEC39	YLR440C	YGR012W	P53206	393 aa		5.13	□□□□□ -1.59
SEC39	YLR440C	MNT4	P53745	580 aa		5.13	□□□□□ -1.59
SEC39	YLR440C	RLI1	Q03195	608 aa	Known RBP	5.13	□□□□□ -1.59
SEC39	YLR440C	URC2	Q04411	772 aa		5.13	□□□□□ -1.59
SEC39	YLR440C	YMR114C	Q04471	368 aa	Known RBP	5.13	□□□□□ -1.59
SEC39	YLR440C	YPL225W	Q08971	146 aa	Known RBP	5.13	□□□□□ -1.59
SEC39	YLR440C	GPR1	Q12361	961 aa		5.13	□□□□□ -1.59
SEC39	YLR440C	ARP7	Q12406	477 aa		5.13	□□□□□ -1.59
SEC39	YLR440C	ATG11	Q12527	1178 aa		5.13	□□□□□ -1.59
SEC39	YLR440C	WHI2	P12611	486 aa		5.12	□□□□□ -1.59
SEC39	YLR440C	THR1	P17423	357 aa	Known RBP	5.12	□□□□□ -1.59
SEC39	YLR440C	SAN1	P22470	610 aa		5.12	□□□□□ -1.59
SEC39	YLR440C	PEX1	P24004	1043 aa		5.12	□□□□□ -1.59
SEC39	YLR440C	MRPL37	P36532	105 aa		5.12	□□□□□ -1.59
SEC39	YLR440C	GND1	P38720	489 aa	Known RBP	5.12	□□□□□ -1.59
SEC39	YLR440C	YHL041W	P38730	149 aa		5.12	□□□□□ -1.59
SEC39	YLR440C	OSH7	P38755	437 aa		5.12	□□□□□ -1.59
SEC39	YLR440C	GDI1	P39958	451 aa	Known RBP	5.12	□□□□□ -1.59
SEC39	YLR440C	YER184C	P39961	794 aa		5.12	□□□□□ -1.59
SEC39	YLR440C	GIM4	P40005	111 aa	Known RBP	5.12	□□□□□ -1.59
SEC39	YLR440C	FCY21	P40039	528 aa		5.12	□□□□□ -1.59
SEC39	YLR440C	EMP65	P40085	556 aa		5.12	□□□□□ -1.59
SEC39	YLR440C	YJL068C	P40363	299 aa		5.12	□□□□□ -1.59
SEC39	YLR440C	STB1	P42845	420 aa		5.12	□□□□□ -1.59
SEC39	YLR440C	YJR039W	P47107	1121 aa		5.12	□□□□□ -1.59
SEC39	YLR440C	GCV2	P49095	1034 aa		5.12	□□□□□ -1.59
SEC39	YLR440C	YKE2	P52553	114 aa		5.12	□□□□□ -1.59
SEC39	YLR440C	SFB2	P53953	876 aa		5.12	□□□□□ -1.59
SEC39	YLR440C	HEF3	P53978	1044 aa	Known RBP	5.12	□□□□□ -1.59
SEC39	YLR440C	ARP4	P80428	489 aa		5.12	□□□□□ -1.59
SEC39	YLR440C	ECM38	Q05902	660 aa	Predicted RBP	5.12	□□□□□ -1.59
SEC39	YLR440C	DDC1	Q08949	612 aa		5.12	□□□□□ -1.59
SEC39	YLR440C	VPS54	Q12071	889 aa		5.12	□□□□□ -1.59
SEC39	YLR440C	IES3	Q12345	250 aa		5.12	□□□□□ -1.59
SEC39	YLR440C	RAD61	Q99359	647 aa		5.12	□□□□□ -1.59
SEC39	YLR440C	TDH1	P00360	332 aa	Known RBP	5.12	□□□□□ -1.59
SEC39	YLR440C	HIS4	P00815	799 aa	Known RBP	5.12	□□□□□ -1.59
SEC39	YLR440C	CBP2	P03874	630 aa	Predicted RBP	5.12	□□□□□ -1.59
SEC39	YLR440C	HSF1	P10961	833 aa		5.12	□□□□□ -1.59
SEC39	YLR440C	TAL1	P15019	335 aa	Known RBP	5.12	□□□□□ -1.59
SEC39	YLR440C	RDS2	P19541	446 aa	Known RBP	5.12	□□□□□ -1.59

Retrieved 100 of 5,963 RNA–protein pairs in 14.4 ms