RNA–Protein interactions for RNA: YLR268W

SEC22, Transcript of R-SNARE protein, yeastyeast

Gene SEC22, Length 645 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC22YLR268W TES1P41903 349 aaKnown RBP3.07□□□□□ -1.92
SEC22YLR268W YGR153WP48238 217 aa3.07□□□□□ -1.92
SEC22YLR268W YDL183CP48569 320 aa3.07□□□□□ -1.92
SEC22YLR268W CRT10Q08226 957 aa3.07□□□□□ -1.92
SEC22YLR268W PUF2Q12221 1075 aaKnown RBP RIP-Chip data3.07□□□□□ -1.92not detected
SEC22YLR268W PNO1Q99216 274 aaKnown RBP3.07□□□□□ -1.92
SEC22YLR268W MAK32P23060 363 aa3.06□□□□□ -1.92
SEC22YLR268W YCR043CP25361 127 aa3.06□□□□□ -1.92
SEC22YLR268W RPT3P33298 428 aaKnown RBP3.06□□□□□ -1.92
SEC22YLR268W SDS24P38314 527 aa3.06□□□□□ -1.92
SEC22YLR268W YJL193WP39542 402 aa3.06□□□□□ -1.92
SEC22YLR268W MGS1P40151 587 aa3.06□□□□□ -1.92
SEC22YLR268W YGL260WP53056 76 aa3.06□□□□□ -1.92
SEC22YLR268W NRT1Q08485 598 aa3.06□□□□□ -1.92
SEC22YLR268W VPS33P20795 691 aa3.05□□□□□ -1.92
SEC22YLR268W SEC65P29478 273 aa3.05□□□□□ -1.92
SEC22YLR268W PRP19P32523 503 aaKnown RBP3.05□□□□□ -1.92
SEC22YLR268W PPG1P32838 368 aa3.05□□□□□ -1.92
SEC22YLR268W FTH1P38310 465 aa3.05□□□□□ -1.92
SEC22YLR268W ARC40P38328 384 aaKnown RBP3.05□□□□□ -1.92
SEC22YLR268W HLJ1P48353 224 aa3.05□□□□□ -1.92
SEC22YLR268W SNU56Q03782 492 aaKnown RBP3.05□□□□□ -1.92
SEC22YLR268W HMG2P12684 1045 aa3.04□□□□□ -1.92
SEC22YLR268W MF(ALPHA)2P32435 120 aa3.04□□□□□ -1.92
SEC22YLR268W YHR033WP38690 423 aa3.04□□□□□ -1.92
SEC22YLR268W DED81P38707 554 aaKnown RBP3.04□□□□□ -1.92
SEC22YLR268W NMD2P38798 1089 aaKnown RBP3.04□□□□□ -1.92
SEC22YLR268W MTD1Q02046 320 aaKnown RBP3.04□□□□□ -1.92
SEC22YLR268W RTT103Q05543 409 aa3.04□□□□□ -1.92
SEC22YLR268W MLH2Q07980 695 aa3.04□□□□□ -1.92
SEC22YLR268W NOP14Q99207 810 aaKnown RBP3.04□□□□□ -1.92
SEC22YLR268W ILS1P09436 1072 aaKnown RBP3.03□□□□□ -1.92
SEC22YLR268W YPK1P12688 680 aaKnown RBP3.03□□□□□ -1.92
SEC22YLR268W YOX1P34161 385 aa3.03□□□□□ -1.92
SEC22YLR268W RRP14P36080 434 aaKnown RBP3.03□□□□□ -1.92
SEC22YLR268W IMD2P38697 523 aaKnown RBP3.03□□□□□ -1.92
SEC22YLR268W CIR1P42940 261 aa3.03□□□□□ -1.92
SEC22YLR268W YJR096WP47137 282 aa3.03□□□□□ -1.92
SEC22YLR268W IMD3P50095 523 aaKnown RBP3.03□□□□□ -1.92
SEC22YLR268W YNL092WP53934 400 aa3.03□□□□□ -1.92
SEC22YLR268W PTA1Q01329 785 aaPredicted RBP3.03□□□□□ -1.92
SEC22YLR268W YHM2Q04013 314 aa3.03□□□□□ -1.92
SEC22YLR268W RAD33Q04231 177 aa3.03□□□□□ -1.92
SEC22YLR268W UTP14Q04500 899 aaKnown RBP3.03□□□□□ -1.92
SEC22YLR268W GET3Q12154 354 aaKnown RBP3.03□□□□□ -1.92
SEC22YLR268W PCK1P10963 549 aa3.02□□□□□ -1.93
SEC22YLR268W RPL8AP17076 256 aaKnown RBP3.02□□□□□ -1.93
SEC22YLR268W CDC5P32562 705 aa3.02□□□□□ -1.93
SEC22YLR268W CIN1P40987 1014 aa3.02□□□□□ -1.93
SEC22YLR268W RNH70P53331 553 aa3.02□□□□□ -1.93
SEC22YLR268W GAL4P04386 881 aa3.01□□□□□ -1.93
SEC22YLR268W SEC12P11655 471 aa3.01□□□□□ -1.93
SEC22YLR268W GLN4P13188 809 aaKnown RBP3.01□□□□□ -1.93
SEC22YLR268W DGR2P32330 852 aa3.01□□□□□ -1.93
SEC22YLR268W HXT6P39003 570 aaKnown RBP3.01□□□□□ -1.93
SEC22YLR268W HXT7P39004 570 aa3.01□□□□□ -1.93
SEC22YLR268W MET30P39014 640 aa3.01□□□□□ -1.93
SEC22YLR268W RAD26P40352 1085 aa3.01□□□□□ -1.93
SEC22YLR268W SKP2P42843 763 aa3.01□□□□□ -1.93
SEC22YLR268W GZF3P42944 551 aaKnown RBP3.01□□□□□ -1.93
SEC22YLR268W ALG12P53730 551 aa3.01□□□□□ -1.93
SEC22YLR268W SQS1P53866 767 aaKnown RBP3.01□□□□□ -1.93
SEC22YLR268W YMR317WQ04893 1140 aa3.01□□□□□ -1.93
SEC22YLR268W RPS21BQ3E754 87 aaKnown RBP3.01□□□□□ -1.93
SEC22YLR268W APM4Q99186 491 aa3.01□□□□□ -1.93
SEC22YLR268W CDC26P14724 124 aa3□□□□□ -1.93
SEC22YLR268W BET2P20133 325 aa3□□□□□ -1.93
SEC22YLR268W DSS4P32601 143 aa3□□□□□ -1.93
SEC22YLR268W GDA1P32621 518 aa3□□□□□ -1.93
SEC22YLR268W FMP46P36141 133 aaKnown RBP3□□□□□ -1.93
SEC22YLR268W TYS1P36421 394 aaKnown RBP3□□□□□ -1.93
SEC22YLR268W YIL169CP40442 995 aa3□□□□□ -1.93
SEC22YLR268W YMR034CQ05131 434 aaPredicted RBP3□□□□□ -1.93
SEC22YLR268W YTM1Q12024 460 aaPredicted RBP3□□□□□ -1.93
SEC22YLR268W ADR1P07248 1323 aa2.99□□□□□ -1.93
SEC22YLR268W OAF3P36023 863 aa2.99□□□□□ -1.93
SEC22YLR268W DID4P36108 232 aa2.99□□□□□ -1.93
SEC22YLR268W SCO2P38072 301 aa2.99□□□□□ -1.93
SEC22YLR268W RRP8P38961 392 aaKnown RBP2.99□□□□□ -1.93
SEC22YLR268W MNN1P39106 762 aa2.99□□□□□ -1.93
SEC22YLR268W VID28P40547 921 aa2.99□□□□□ -1.93
SEC22YLR268W NOP2P40991 618 aaKnown RBP2.99□□□□□ -1.93
SEC22YLR268W THI73Q07904 523 aa2.99□□□□□ -1.93
SEC22YLR268W HFI1Q12060 488 aa2.99□□□□□ -1.93
SEC22YLR268W YFL068WP0CX99 160 aa2.98□□□□□ -1.93
SEC22YLR268W YLL066W-AP0CY00 160 aa2.98□□□□□ -1.93
SEC22YLR268W YLL067W-AP0CY01 160 aa2.98□□□□□ -1.93
SEC22YLR268W CBP3P21560 335 aa2.98□□□□□ -1.93
SEC22YLR268W AEP2P22136 580 aa2.98□□□□□ -1.93
SEC22YLR268W KES1P35844 434 aaKnown RBP2.98□□□□□ -1.93
SEC22YLR268W SDH8P38345 138 aa2.98□□□□□ -1.93
SEC22YLR268W FPR3P38911 411 aaKnown RBP2.98□□□□□ -1.93
SEC22YLR268W LAS21P40367 830 aa2.98□□□□□ -1.93
SEC22YLR268W PMT3P47190 753 aa2.98□□□□□ -1.93
SEC22YLR268W ECM9Q02202 377 aa2.98□□□□□ -1.93
SEC22YLR268W LYS21Q12122 440 aaKnown RBP2.98□□□□□ -1.93
SEC22YLR268W YMR230W-AQ3E7B5 62 aa2.98□□□□□ -1.93
SEC22YLR268W CHO2P05374 869 aaKnown RBP2.97□□□□□ -1.93
SEC22YLR268W VRG4P40107 337 aa2.97□□□□□ -1.93
SEC22YLR268W MNN11P46985 422 aaKnown RBP2.97□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 18.6 ms