RNA–Protein interactions for RNA: YLR147C

SMD3, Transcript of Core Sm protein Sm D3, yeast

Gene SMD3, Length 306 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SMD3	YLR147C	PRP45	P28004	379 aa	Predicted RBP	4.66	□□□□□ -1.66
SMD3	YLR147C	SCS2	P40075	244 aa	Known RBP	4.66	□□□□□ -1.66
SMD3	YLR147C	GSM1	P42950	618 aa		4.66	□□□□□ -1.66
SMD3	YLR147C	YNL034W	P53963	612 aa		4.66	□□□□□ -1.66
SMD3	YLR147C	GFD1	Q04839	188 aa	Known RBP	4.66	□□□□□ -1.66
SMD3	YLR147C	SEC3	P33332	1336 aa	Known RBP	4.66	□□□□□ -1.66
SMD3	YLR147C	YMR084W	A2P2R3	262 aa		4.65	□□□□□ -1.67
SMD3	YLR147C	HEM1	P09950	548 aa	Predicted RBP	4.65	□□□□□ -1.67
SMD3	YLR147C	APN1	P22936	367 aa		4.65	□□□□□ -1.67
SMD3	YLR147C	RPC34	P32910	317 aa		4.65	□□□□□ -1.67
SMD3	YLR147C	TGL1	P34163	548 aa		4.65	□□□□□ -1.67
SMD3	YLR147C	STB5	P38699	743 aa		4.65	□□□□□ -1.67
SMD3	YLR147C	TDA10	P42938	290 aa		4.65	□□□□□ -1.67
SMD3	YLR147C	CNM67	P53865	581 aa	Known RBP	4.65	□□□□□ -1.67
SMD3	YLR147C	WAR1	Q03631	944 aa		4.65	□□□□□ -1.67
SMD3	YLR147C	NUP1	P20676	1076 aa		4.64	□□□□□ -1.67
SMD3	YLR147C	CBP3	P21560	335 aa		4.64	□□□□□ -1.67
SMD3	YLR147C	PHO3	P24031	467 aa		4.64	□□□□□ -1.67
SMD3	YLR147C	YJU2	P28320	278 aa	Predicted RBP	4.64	□□□□□ -1.67
SMD3	YLR147C	SDH8	P38345	138 aa		4.64	□□□□□ -1.67
SMD3	YLR147C	TRI1	Q05024	226 aa		4.64	□□□□□ -1.67
SMD3	YLR147C	NUR1	Q12066	484 aa		4.64	□□□□□ -1.67
SMD3	YLR147C	FRE7	Q12333	620 aa		4.64	□□□□□ -1.67
SMD3	YLR147C	ADH4	P10127	382 aa		4.63	□□□□□ -1.67
SMD3	YLR147C	MRPL9	P31334	269 aa		4.63	□□□□□ -1.67
SMD3	YLR147C	BNA3	P47039	444 aa	Known RBP	4.63	□□□□□ -1.67
SMD3	YLR147C	PEX8	P53248	589 aa		4.63	□□□□□ -1.67
SMD3	YLR147C	CEG1	Q01159	459 aa	Predicted RBP	4.63	□□□□□ -1.67
SMD3	YLR147C	ACS1	Q01574	713 aa		4.63	□□□□□ -1.67
SMD3	YLR147C	VAS1	P07806	1104 aa	Known RBP	4.62	□□□□□ -1.67
SMD3	YLR147C	IMA5	P40884	581 aa		4.62	□□□□□ -1.67
SMD3	YLR147C	OPT1	P40897	799 aa		4.62	□□□□□ -1.67
SMD3	YLR147C	BST1	P43571	1029 aa		4.62	□□□□□ -1.67
SMD3	YLR147C	YJL043W	P47053	257 aa		4.62	□□□□□ -1.67
SMD3	YLR147C	SND1	Q04007	877 aa		4.62	□□□□□ -1.67
SMD3	YLR147C	ENT2	Q05785	613 aa		4.62	□□□□□ -1.67
SMD3	YLR147C	GSY2	P27472	705 aa		4.61	□□□□□ -1.67
SMD3	YLR147C	SDS22	P36047	338 aa		4.61	□□□□□ -1.67
SMD3	YLR147C	SAE2	P46946	345 aa		4.61	□□□□□ -1.67
SMD3	YLR147C	ATG36	P46983	293 aa		4.61	□□□□□ -1.67
SMD3	YLR147C	CRT10	Q08226	957 aa		4.61	□□□□□ -1.67
SMD3	YLR147C	MPD2	Q99316	277 aa		4.61	□□□□□ -1.67
SMD3	YLR147C	Q0010	Q9ZZX9	128 aa		4.61	□□□□□ -1.67
SMD3	YLR147C	PRE2	P30656	287 aa	Known RBP	4.6	□□□□□ -1.67
SMD3	YLR147C	GDA1	P32621	518 aa		4.6	□□□□□ -1.67
SMD3	YLR147C	VPS8	P39702	1274 aa		4.6	□□□□□ -1.67
SMD3	YLR147C	SWD1	P39706	426 aa		4.6	□□□□□ -1.67
SMD3	YLR147C	SAW1	P39735	261 aa		4.6	□□□□□ -1.67
SMD3	YLR147C	LTP1	P40347	161 aa		4.6	□□□□□ -1.67
SMD3	YLR147C	XBP1	P40489	647 aa		4.6	□□□□□ -1.67
SMD3	YLR147C	IDS2	P46958	469 aa		4.6	□□□□□ -1.67
SMD3	YLR147C	ASK10	P48361	1146 aa		4.6	□□□□□ -1.67
SMD3	YLR147C	TRS31	Q03337	283 aa		4.6	□□□□□ -1.67
SMD3	YLR147C	RAD33	Q04231	177 aa		4.6	□□□□□ -1.67
SMD3	YLR147C	HRD3	Q05787	833 aa		4.6	□□□□□ -1.67
SMD3	YLR147C	AHA1	Q12449	350 aa	Known RBP	4.6	□□□□□ -1.67
SMD3	YLR147C	AMD2	P22580	549 aa		4.59	□□□□□ -1.67
SMD3	YLR147C	YCR061W	P25639	631 aa		4.59	□□□□□ -1.67
SMD3	YLR147C	TOM20	P35180	183 aa		4.59	□□□□□ -1.67
SMD3	YLR147C	APD1	P38281	316 aa		4.59	□□□□□ -1.67
SMD3	YLR147C	YLF2	P38746	405 aa		4.59	□□□□□ -1.67
SMD3	YLR147C	VFA1	P40080	203 aa		4.59	□□□□□ -1.67
SMD3	YLR147C	POL31	P46957	487 aa		4.59	□□□□□ -1.67
SMD3	YLR147C	ATP23	P53722	227 aa		4.59	□□□□□ -1.67
SMD3	YLR147C	YML119W	Q03208	357 aa		4.59	□□□□□ -1.67
SMD3	YLR147C	RDL1	Q12305	139 aa	Known RBP	4.59	□□□□□ -1.67
SMD3	YLR147C	TAF5	P38129	798 aa		4.58	□□□□□ -1.68
SMD3	YLR147C	SPN1	Q06505	410 aa	Predicted RBP	4.58	□□□□□ -1.68
SMD3	YLR147C	BSP1	Q06604	576 aa		4.58	□□□□□ -1.68
SMD3	YLR147C	ARP7	Q12406	477 aa		4.58	□□□□□ -1.68
SMD3	YLR147C	YLR111W	Q12528	110 aa		4.58	□□□□□ -1.68
SMD3	YLR147C	TMA7	Q3E764	64 aa	Known RBP	4.58	□□□□□ -1.68
SMD3	YLR147C	CHO2	P05374	869 aa	Known RBP	4.57	□□□□□ -1.68
SMD3	YLR147C	BEM3	P32873	1128 aa		4.57	□□□□□ -1.68
SMD3	YLR147C	NIC96	P34077	839 aa		4.57	□□□□□ -1.68
SMD3	YLR147C	ARO9	P38840	513 aa	Predicted RBP	4.57	□□□□□ -1.68
SMD3	YLR147C	NMD5	P46970	1048 aa		4.57	□□□□□ -1.68
SMD3	YLR147C	IRC3	Q06683	689 aa		4.57	□□□□□ -1.68
SMD3	YLR147C	CYK3	Q07533	885 aa		4.57	□□□□□ -1.68
SMD3	YLR147C	CRD1	Q07560	283 aa		4.57	□□□□□ -1.68
SMD3	YLR147C	AAD4	Q07747	329 aa		4.57	□□□□□ -1.68
SMD3	YLR147C	AFT2	Q08957	416 aa		4.57	□□□□□ -1.68
SMD3	YLR147C	LCB4	Q12246	624 aa		4.57	□□□□□ -1.68
SMD3	YLR147C	PTP1	P25044	335 aa		4.56	□□□□□ -1.68
SMD3	YLR147C	RRP43	P25359	394 aa	Predicted RBP	4.56	□□□□□ -1.68
SMD3	YLR147C	ARB1	P40024	610 aa	Known RBP	4.56	□□□□□ -1.68
SMD3	YLR147C	ULP2	P40537	1034 aa	Predicted RBP	4.56	□□□□□ -1.68
SMD3	YLR147C	UBP16	Q02863	499 aa		4.56	□□□□□ -1.68
SMD3	YLR147C	ORM2	Q06144	216 aa		4.56	□□□□□ -1.68
SMD3	YLR147C	RPS7A	P26786	190 aa	Known RBP	4.55	□□□□□ -1.68
SMD3	YLR147C	MTG2	P38860	518 aa		4.55	□□□□□ -1.68
SMD3	YLR147C	MAM1	P40065	302 aa		4.55	□□□□□ -1.68
SMD3	YLR147C	LAS21	P40367	830 aa		4.55	□□□□□ -1.68
SMD3	YLR147C	NET1	P47035	1189 aa		4.55	□□□□□ -1.68
SMD3	YLR147C	MAD3	P47074	515 aa		4.55	□□□□□ -1.68
SMD3	YLR147C	BPL1	P48445	690 aa	Predicted RBP	4.55	□□□□□ -1.68
SMD3	YLR147C	SST2	P11972	698 aa	Known RBP	4.54	□□□□□ -1.68
SMD3	YLR147C	KGD2	P19262	463 aa	Predicted RBP	4.54	□□□□□ -1.68
SMD3	YLR147C	MAK32	P23060	363 aa		4.54	□□□□□ -1.68
SMD3	YLR147C	FRD1	P32614	470 aa	Known RBP	4.54	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 27.4 ms