RNA–Protein interactions for RNA: YKR094C

RPL40B, Transcript of Ubiquitin-ribosomal 60S subunit protein L40B fusion protein, yeastyeast

Gene RPL40B, Length 387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPL40BYKR094C VPS33P20795 691 aa2.91□□□□□ -1.94
RPL40BYKR094C GDA1P32621 518 aa2.91□□□□□ -1.94
RPL40BYKR094C HXT6P39003 570 aaKnown RBP2.91□□□□□ -1.94
RPL40BYKR094C HXT7P39004 570 aa2.91□□□□□ -1.94
RPL40BYKR094C YJL193WP39542 402 aa2.91□□□□□ -1.94
RPL40BYKR094C TES1P41903 349 aaKnown RBP2.91□□□□□ -1.94
RPL40BYKR094C YGL260WP53056 76 aa2.91□□□□□ -1.94
RPL40BYKR094C YNL092WP53934 400 aa2.91□□□□□ -1.94
RPL40BYKR094C RAD33Q04231 177 aa2.91□□□□□ -1.94
RPL40BYKR094C GRS2Q06817 618 aa2.91□□□□□ -1.94
RPL40BYKR094C UBX3Q12229 455 aa2.91□□□□□ -1.94
RPL40BYKR094C CDC26P14724 124 aa2.9□□□□□ -1.95
RPL40BYKR094C MAK32P23060 363 aa2.9□□□□□ -1.95
RPL40BYKR094C FTH1P38310 465 aa2.9□□□□□ -1.95
RPL40BYKR094C ARC40P38328 384 aaKnown RBP2.9□□□□□ -1.95
RPL40BYKR094C CKB2P38930 258 aa2.9□□□□□ -1.95
RPL40BYKR094C VID28P40547 921 aa2.9□□□□□ -1.95
RPL40BYKR094C YJR096WP47137 282 aa2.9□□□□□ -1.95
RPL40BYKR094C YGR153WP48238 217 aa2.9□□□□□ -1.95
RPL40BYKR094C SDA1P53313 767 aaKnown RBP2.9□□□□□ -1.95
RPL40BYKR094C AAT1Q01802 451 aa2.9□□□□□ -1.95
RPL40BYKR094C YMR034CQ05131 434 aaPredicted RBP2.9□□□□□ -1.95
RPL40BYKR094C FAT1P38225 669 aa2.89□□□□□ -1.95
RPL40BYKR094C CIN1P40987 1014 aa2.89□□□□□ -1.95
RPL40BYKR094C ATX2Q12067 313 aa2.89□□□□□ -1.95
RPL40BYKR094C PCK1P10963 549 aa2.88□□□□□ -1.95
RPL40BYKR094C MF(ALPHA)2P32435 120 aa2.88□□□□□ -1.95
RPL40BYKR094C CDC5P32562 705 aa2.88□□□□□ -1.95
RPL40BYKR094C DSS4P32601 143 aa2.88□□□□□ -1.95
RPL40BYKR094C OAF3P36023 863 aa2.88□□□□□ -1.95
RPL40BYKR094C SCO2P38072 301 aa2.88□□□□□ -1.95
RPL40BYKR094C DED81P38707 554 aaKnown RBP2.88□□□□□ -1.95
RPL40BYKR094C CRT10Q08226 957 aa2.88□□□□□ -1.95
RPL40BYKR094C PFA4Q12006 378 aa2.88□□□□□ -1.95
RPL40BYKR094C BET2P20133 325 aa2.87□□□□□ -1.95
RPL40BYKR094C PRP19P32523 503 aaKnown RBP2.87□□□□□ -1.95
RPL40BYKR094C RMA1P36001 430 aaKnown RBP2.87□□□□□ -1.95
RPL40BYKR094C SDS24P38314 527 aa2.87□□□□□ -1.95
RPL40BYKR094C MET30P39014 640 aa2.87□□□□□ -1.95
RPL40BYKR094C ECM9Q02202 377 aa2.87□□□□□ -1.95
RPL40BYKR094C YHM2Q04013 314 aa2.87□□□□□ -1.95
RPL40BYKR094C MLH2Q07980 695 aa2.87□□□□□ -1.95
RPL40BYKR094C ILS1P09436 1072 aaKnown RBP2.86□□□□□ -1.95
RPL40BYKR094C YOX1P34161 385 aa2.86□□□□□ -1.95
RPL40BYKR094C OCA5P38738 679 aa2.86□□□□□ -1.95
RPL40BYKR094C MNN1P39106 762 aa2.86□□□□□ -1.95
RPL40BYKR094C YIL169CP40442 995 aa2.86□□□□□ -1.95
RPL40BYKR094C GET3Q12154 354 aaKnown RBP2.86□□□□□ -1.95
RPL40BYKR094C RTC1Q08281 1341 aa2.86□□□□□ -1.95
RPL40BYKR094C TUF1P02992 437 aaKnown RBP2.85□□□□□ -1.95
RPL40BYKR094C RPS21AP0C0V8 87 aaKnown RBP2.85□□□□□ -1.95
RPL40BYKR094C RRP43P25359 394 aaPredicted RBP2.85□□□□□ -1.95
RPL40BYKR094C FMP46P36141 133 aaKnown RBP2.85□□□□□ -1.95
RPL40BYKR094C RTT107P38850 1070 aa2.85□□□□□ -1.95
RPL40BYKR094C YML119WQ03208 357 aa2.85□□□□□ -1.95
RPL40BYKR094C YOR389WQ08912 624 aa2.85□□□□□ -1.95
RPL40BYKR094C HFI1Q12060 488 aa2.85□□□□□ -1.95
RPL40BYKR094C Q0010Q9ZZX9 128 aa2.85□□□□□ -1.95
RPL40BYKR094C TOM71P38825 639 aaKnown RBP2.84□□□□□ -1.95
RPL40BYKR094C CIR1P42940 261 aa2.84□□□□□ -1.95
RPL40BYKR094C HOS2P53096 452 aaPredicted RBP2.84□□□□□ -1.95
RPL40BYKR094C SQS1P53866 767 aaKnown RBP2.84□□□□□ -1.95
RPL40BYKR094C MTD1Q02046 320 aaKnown RBP2.84□□□□□ -1.95
RPL40BYKR094C VTC3Q02725 835 aa2.84□□□□□ -1.95
RPL40BYKR094C YMR317WQ04893 1140 aa2.84□□□□□ -1.95
RPL40BYKR094C RTT103Q05543 409 aa2.84□□□□□ -1.95
RPL40BYKR094C RAD34Q06665 692 aa2.84□□□□□ -1.95
RPL40BYKR094C YMR230W-AQ3E7B5 62 aa2.84□□□□□ -1.95
RPL40BYKR094C SEC18P18759 758 aaKnown RBP2.83□□□□□ -1.96
RPL40BYKR094C SFP1P32432 683 aa2.83□□□□□ -1.96
RPL40BYKR094C SDH8P38345 138 aa2.83□□□□□ -1.96
RPL40BYKR094C ORC1P54784 914 aaPredicted RBP2.83□□□□□ -1.96
RPL40BYKR094C APM4Q99186 491 aa2.83□□□□□ -1.96
RPL40BYKR094C YFL068WP0CX99 160 aa2.82□□□□□ -1.96
RPL40BYKR094C YLL066W-AP0CY00 160 aa2.82□□□□□ -1.96
RPL40BYKR094C YLL067W-AP0CY01 160 aa2.82□□□□□ -1.96
RPL40BYKR094C AMD2P22580 549 aa2.82□□□□□ -1.96
RPL40BYKR094C DGR2P32330 852 aa2.82□□□□□ -1.96
RPL40BYKR094C HXT4P32467 576 aa2.82□□□□□ -1.96
RPL40BYKR094C ERV46P39727 415 aa2.82□□□□□ -1.96
RPL40BYKR094C YPT11P48559 417 aa2.82□□□□□ -1.96
RPL40BYKR094C COG2P53271 262 aa2.82□□□□□ -1.96
RPL40BYKR094C YNL058CP53947 316 aa2.82□□□□□ -1.96
RPL40BYKR094C PTA1Q01329 785 aaPredicted RBP2.82□□□□□ -1.96
RPL40BYKR094C DIG1Q03063 452 aaKnown RBP2.82□□□□□ -1.96
RPL40BYKR094C ARA2Q04212 335 aa2.82□□□□□ -1.96
RPL40BYKR094C LYS21Q12122 440 aaKnown RBP2.82□□□□□ -1.96
RPL40BYKR094C SEC12P11655 471 aa2.81□□□□□ -1.96
RPL40BYKR094C RPL8AP17076 256 aaKnown RBP2.81□□□□□ -1.96
RPL40BYKR094C CNA1P23287 553 aa2.81□□□□□ -1.96
RPL40BYKR094C UBP16Q02863 499 aa2.81□□□□□ -1.96
RPL40BYKR094C ECM22Q05958 814 aaPredicted RBP2.81□□□□□ -1.96
RPL40BYKR094C RRI1Q12468 440 aa2.81□□□□□ -1.96
RPL40BYKR094C CHO2P05374 869 aaKnown RBP2.8□□□□□ -1.96
RPL40BYKR094C RPL42AP0CX27 106 aaKnown RBP2.8□□□□□ -1.96
RPL40BYKR094C RPL42BP0CX28 106 aaKnown RBP2.8□□□□□ -1.96
RPL40BYKR094C KES1P35844 434 aaKnown RBP2.8□□□□□ -1.96
RPL40BYKR094C SAP1P39955 897 aaKnown RBP2.8□□□□□ -1.96
RPL40BYKR094C GZF3P42944 551 aaKnown RBP2.8□□□□□ -1.96
RPL40BYKR094C SAD1P43589 448 aa2.8□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 34.5 ms