RNA–Protein interactions for RNA: YKL043W

PHD1, Transcript of Transcriptional activator that enhances pseudohyphal growth, yeast

Gene PHD1, Length 1,101 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PHD1	YKL043W	GAL83	Q04739	417 aa		3.14	□□□□□ -1.91
PHD1	YKL043W	HEL2	Q05580	639 aa	Known RBP	3.14	□□□□□ -1.91
PHD1	YKL043W	YPR078C	Q06813	372 aa		3.14	□□□□□ -1.91
PHD1	YKL043W	YLR001C	Q07895	862 aa		3.14	□□□□□ -1.91
PHD1	YKL043W	RCN2	Q12044	265 aa		3.14	□□□□□ -1.91
PHD1	YKL043W	VPS54	Q12071	889 aa		3.14	□□□□□ -1.91
PHD1	YKL043W	TAH18	Q12181	623 aa		3.14	□□□□□ -1.91
PHD1	YKL043W	HER1	Q12276	1246 aa		3.14	□□□□□ -1.91
PHD1	YKL043W	HRT3	Q12347	344 aa		3.14	□□□□□ -1.91
PHD1	YKL043W	RRI2	Q12348	645 aa		3.14	□□□□□ -1.91
PHD1	YKL043W	GRX6	Q12438	231 aa		3.14	□□□□□ -1.91
PHD1	YKL043W	PTC5	Q12511	572 aa		3.14	□□□□□ -1.91
PHD1	YKL043W	PGA3	Q12746	312 aa	Known RBP	3.14	□□□□□ -1.91
PHD1	YKL043W	FLO11	P08640	1367 aa		3.13	□□□□□ -1.91
PHD1	YKL043W	MF(ALPHA)1	P01149	165 aa		3.13	□□□□□ -1.91
PHD1	YKL043W	MPH2	P0CD99	609 aa		3.13	□□□□□ -1.91
PHD1	YKL043W	WHI2	P12611	486 aa		3.13	□□□□□ -1.91
PHD1	YKL043W	RED1	P14291	827 aa		3.13	□□□□□ -1.91
PHD1	YKL043W	HEM15	P16622	393 aa		3.13	□□□□□ -1.91
PHD1	YKL043W	CKA2	P19454	339 aa		3.13	□□□□□ -1.91
PHD1	YKL043W	HSP60	P19882	572 aa	Known RBP	3.13	□□□□□ -1.91
PHD1	YKL043W	PEX1	P24004	1043 aa		3.13	□□□□□ -1.91
PHD1	YKL043W	DAL1	P32375	460 aa		3.13	□□□□□ -1.91
PHD1	YKL043W	DOM34	P33309	386 aa		3.13	□□□□□ -1.91
PHD1	YKL043W	RER2	P35196	286 aa		3.13	□□□□□ -1.91
PHD1	YKL043W	TEF4	P36008	412 aa	Known RBP	3.13	□□□□□ -1.91
PHD1	YKL043W	VPS21	P36017	210 aa	Known RBP	3.13	□□□□□ -1.91
PHD1	YKL043W	CUE2	P36075	443 aa	Known RBP	3.13	□□□□□ -1.91
PHD1	YKL043W	TRZ1	P36159	838 aa	Predicted RBP	3.13	□□□□□ -1.91
PHD1	YKL043W	MAK5	P38112	773 aa	Predicted RBP	3.13	□□□□□ -1.91
PHD1	YKL043W	MAL31	P38156	614 aa		3.13	□□□□□ -1.91
PHD1	YKL043W	YBL036C	P38197	257 aa		3.13	□□□□□ -1.91
PHD1	YKL043W	GIP1	P38229	639 aa		3.13	□□□□□ -1.91
PHD1	YKL043W	SPL2	P38839	148 aa		3.13	□□□□□ -1.91
PHD1	YKL043W	MTG2	P38860	518 aa		3.13	□□□□□ -1.91
PHD1	YKL043W	SPC97	P38863	823 aa		3.13	□□□□□ -1.91
PHD1	YKL043W	ICP55	P40051	511 aa		3.13	□□□□□ -1.91
PHD1	YKL043W	PSY2	P40164	858 aa		3.13	□□□□□ -1.91
PHD1	YKL043W	UTP18	P40362	594 aa	Predicted RBP	3.13	□□□□□ -1.91
PHD1	YKL043W	GSM1	P42950	618 aa		3.13	□□□□□ -1.91
PHD1	YKL043W	EPL1	P43572	832 aa		3.13	□□□□□ -1.91
PHD1	YKL043W	LSB3	P43603	459 aa	Known RBP	3.13	□□□□□ -1.91
PHD1	YKL043W	TY4A-J	P47023	414 aa		3.13	□□□□□ -1.91
PHD1	YKL043W	LIA1	P47120	325 aa	Known RBP	3.13	□□□□□ -1.91
PHD1	YKL043W	LYS5	P50113	272 aa		3.13	□□□□□ -1.91
PHD1	YKL043W	NUT1	P53114	1132 aa		3.13	□□□□□ -1.91
PHD1	YKL043W	DCP2	P53550	970 aa	Known RBP	3.13	□□□□□ -1.91
PHD1	YKL043W	NSG2	P53898	299 aa		3.13	□□□□□ -1.91
PHD1	YKL043W	PRO2	P54885	456 aa	Known RBP	3.13	□□□□□ -1.91
PHD1	YKL043W	SED5	Q01590	340 aa		3.13	□□□□□ -1.91
PHD1	YKL043W	OSH6	Q02201	448 aa		3.13	□□□□□ -1.91
PHD1	YKL043W	MMT1	Q03218	510 aa		3.13	□□□□□ -1.91
PHD1	YKL043W	NSE5	Q03718	556 aa		3.13	□□□□□ -1.91
PHD1	YKL043W	SMP3	Q04174	516 aa		3.13	□□□□□ -1.91
PHD1	YKL043W	EMI2	Q04409	500 aa	Known RBP	3.13	□□□□□ -1.91
PHD1	YKL043W	COX20	Q04935	205 aa		3.13	□□□□□ -1.91
PHD1	YKL043W	SVF1	Q05515	481 aa		3.13	□□□□□ -1.91
PHD1	YKL043W	COQ9	Q05779	260 aa		3.13	□□□□□ -1.91
PHD1	YKL043W	PNP1	Q05788	311 aa		3.13	□□□□□ -1.91
PHD1	YKL043W	YLR257W	Q06146	321 aa	Known RBP	3.13	□□□□□ -1.91
PHD1	YKL043W	YPR196W	Q06595	470 aa		3.13	□□□□□ -1.91
PHD1	YKL043W	ADY3	Q07732	790 aa		3.13	□□□□□ -1.91
PHD1	YKL043W	YEH2	Q07950	538 aa		3.13	□□□□□ -1.91
PHD1	YKL043W	PUS7	Q08647	676 aa	Known RBP	3.13	□□□□□ -1.91
PHD1	YKL043W	RPN8	Q08723	338 aa	Known RBP	3.13	□□□□□ -1.91
PHD1	YKL043W	SOG2	Q08817	791 aa		3.13	□□□□□ -1.91
PHD1	YKL043W	ICL2	Q12031	575 aa		3.13	□□□□□ -1.91
PHD1	YKL043W	CWC2	Q12046	339 aa	Predicted RBP	3.13	□□□□□ -1.91
PHD1	YKL043W	ATP2	P00830	511 aa	Known RBP	3.12	□□□□□ -1.91
PHD1	YKL043W	MRP13	P12686	339 aa		3.12	□□□□□ -1.91
PHD1	YKL043W	DAT1	P13483	248 aa	Known RBP	3.12	□□□□□ -1.91
PHD1	YKL043W	POL30	P15873	258 aa	Known RBP	3.12	□□□□□ -1.91
PHD1	YKL043W	OM45	P16547	393 aa		3.12	□□□□□ -1.91
PHD1	YKL043W	SPO16	P17122	198 aa		3.12	□□□□□ -1.91
PHD1	YKL043W	DAP2	P18962	818 aa		3.12	□□□□□ -1.91
PHD1	YKL043W	KIN3	P22209	435 aa		3.12	□□□□□ -1.91
PHD1	YKL043W	KRE2	P27809	442 aa		3.12	□□□□□ -1.91
PHD1	YKL043W	PEP7	P32609	515 aa		3.12	□□□□□ -1.91
PHD1	YKL043W	UTR2	P32623	467 aa		3.12	□□□□□ -1.91
PHD1	YKL043W	GLG1	P36143	616 aa		3.12	□□□□□ -1.91
PHD1	YKL043W	GRS1	P38088	690 aa	Known RBP	3.12	□□□□□ -1.91
PHD1	YKL043W	ECM2	P38241	364 aa	Known RBP	3.12	□□□□□ -1.91
PHD1	YKL043W	RXT2	P38255	430 aa		3.12	□□□□□ -1.91
PHD1	YKL043W	TIF5	P38431	405 aa	Known RBP	3.12	□□□□□ -1.91
PHD1	YKL043W	DIA4	P38705	446 aa	Predicted RBP	3.12	□□□□□ -1.91
PHD1	YKL043W	TRM5	P38793	499 aa		3.12	□□□□□ -1.91
PHD1	YKL043W	LSM12	P38828	187 aa	Known RBP	3.12	□□□□□ -1.91
PHD1	YKL043W	ATG7	P38862	630 aa		3.12	□□□□□ -1.91
PHD1	YKL043W	FRT2	P39734	528 aa		3.12	□□□□□ -1.91
PHD1	YKL043W	STL1	P39932	569 aa		3.12	□□□□□ -1.91
PHD1	YKL043W	LCP5	P40079	357 aa	Predicted RBP	3.12	□□□□□ -1.91
PHD1	YKL043W	YRB2	P40517	327 aa		3.12	□□□□□ -1.91
PHD1	YKL043W	SBE2	P42223	864 aa	Known RBP	3.12	□□□□□ -1.91
PHD1	YKL043W	YFL066C	P43538	392 aa		3.12	□□□□□ -1.91
PHD1	YKL043W	YFL034W	P43564	1073 aa		3.12	□□□□□ -1.91
PHD1	YKL043W	IML2	P47031	731 aa		3.12	□□□□□ -1.91
PHD1	YKL043W	ATP22	P50273	684 aa	Predicted RBP	3.12	□□□□□ -1.91
PHD1	YKL043W	YPT32	P51996	222 aa	Known RBP	3.12	□□□□□ -1.91
PHD1	YKL043W	NUP84	P52891	726 aa		3.12	□□□□□ -1.91
PHD1	YKL043W	USE1	P53146	245 aa		3.12	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms