RNA–Protein interactions for RNA: YKL010C

UFD4, Transcript of Ubiquitin-protein ligase (E3), yeastyeast

Gene UFD4, Length 4,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UFD4YKL010C ASP3-4P0CX79 362 aa2.23□□□□□ -2.05
UFD4YKL010C ASP3-1P0CZ17 362 aa2.23□□□□□ -2.05
UFD4YKL010C CHS2P14180 963 aa2.23□□□□□ -2.05
UFD4YKL010C SPS22P25380 463 aa2.23□□□□□ -2.05
UFD4YKL010C MRP8P35719 219 aa2.23□□□□□ -2.05
UFD4YKL010C PAM1P37304 830 aaKnown RBP2.23□□□□□ -2.05
UFD4YKL010C YBR241CP38142 488 aa2.23□□□□□ -2.05
UFD4YKL010C YBR284WP38150 797 aa2.23□□□□□ -2.05
UFD4YKL010C PCM1P38628 557 aaKnown RBP2.23□□□□□ -2.05
UFD4YKL010C LYS9P38999 446 aa2.23□□□□□ -2.05
UFD4YKL010C VAB2P40003 282 aa2.23□□□□□ -2.05
UFD4YKL010C LSB3P43603 459 aaKnown RBP2.23□□□□□ -2.05
UFD4YKL010C YTP1P53584 459 aa2.23□□□□□ -2.05
UFD4YKL010C YPL109CQ02981 657 aa2.23□□□□□ -2.05
UFD4YKL010C TVP15Q03860 143 aa2.23□□□□□ -2.05
UFD4YKL010C SLD7Q08457 257 aa2.23□□□□□ -2.05
UFD4YKL010C IZH4Q99393 312 aa2.23□□□□□ -2.05
UFD4YKL010C SCP160P06105 1222 aaKnown RBP RIP-Chip data2.23□□□□□ -2.05 RIP-Chip
UFD4YKL010C HVG1P0CE11 249 aa2.23□□□□□ -2.05
UFD4YKL010C MSD1P15179 658 aaKnown RBP2.23□□□□□ -2.05
UFD4YKL010C URA4P20051 364 aa2.23□□□□□ -2.05
UFD4YKL010C SEC14P24280 304 aaKnown RBP2.23□□□□□ -2.05
UFD4YKL010C HEL1P36113 551 aa2.23□□□□□ -2.05
UFD4YKL010C ETR1P38071 380 aa2.23□□□□□ -2.05
UFD4YKL010C GRS1P38088 690 aaKnown RBP2.23□□□□□ -2.05
UFD4YKL010C SAF1P38352 637 aa2.23□□□□□ -2.05
UFD4YKL010C GOS1P38736 223 aa2.23□□□□□ -2.05
UFD4YKL010C ALG5P40350 334 aa2.23□□□□□ -2.05
UFD4YKL010C DPH1P40487 425 aaKnown RBP2.23□□□□□ -2.05
UFD4YKL010C ALA1P40825 983 aaKnown RBP2.23□□□□□ -2.05
UFD4YKL010C FET4P40988 552 aa2.23□□□□□ -2.05
UFD4YKL010C YGL036WP53185 909 aaPredicted RBP2.23□□□□□ -2.05
UFD4YKL010C GND2P53319 492 aa2.23□□□□□ -2.05
UFD4YKL010C KTR5P53966 522 aaPredicted RBP2.23□□□□□ -2.05
UFD4YKL010C CLU1Q03690 1277 aaKnown RBP2.23□□□□□ -2.05
UFD4YKL010C FMP42Q04991 504 aa2.23□□□□□ -2.05
UFD4YKL010C YPQ2Q06328 317 aa2.23□□□□□ -2.05
UFD4YKL010C RSC2Q06488 889 aa2.23□□□□□ -2.05
UFD4YKL010C MPH2P0CD99 609 aa2.23□□□□□ -2.05
UFD4YKL010C TAL1P15019 335 aaKnown RBP2.23□□□□□ -2.05
UFD4YKL010C DAL2P25335 343 aa2.23□□□□□ -2.05
UFD4YKL010C FRE1P32791 686 aa2.23□□□□□ -2.05
UFD4YKL010C MDJ1P35191 511 aa2.23□□□□□ -2.05
UFD4YKL010C SWH1P35845 1188 aa2.23□□□□□ -2.05
UFD4YKL010C PEA2P40091 420 aa2.23□□□□□ -2.05
UFD4YKL010C ATG1P53104 897 aa2.23□□□□□ -2.05
UFD4YKL010C CRD1Q07560 283 aa2.23□□□□□ -2.05
UFD4YKL010C MDM20Q12387 796 aaKnown RBP2.23□□□□□ -2.05
UFD4YKL010C KCS1Q12494 1050 aa2.23□□□□□ -2.05
UFD4YKL010C PRP6P19735 899 aaPredicted RBP2.22□□□□□ -2.05
UFD4YKL010C AEP1P32493 518 aa2.22□□□□□ -2.05
UFD4YKL010C AST1P35183 429 aa2.22□□□□□ -2.05
UFD4YKL010C TFA2P36145 328 aa2.22□□□□□ -2.05
UFD4YKL010C RDH54P38086 958 aa2.22□□□□□ -2.05
UFD4YKL010C ERC1P38767 581 aa2.22□□□□□ -2.05
UFD4YKL010C YGL039WP53183 348 aaKnown RBP2.22□□□□□ -2.05
UFD4YKL010C NOP13P53883 403 aaKnown RBP RIP-Chip data2.22□□□□□ -2.05not detected
UFD4YKL010C CDC55Q00362 526 aa2.22□□□□□ -2.05
UFD4YKL010C GTB1Q04924 702 aa2.22□□□□□ -2.05
UFD4YKL010C OCA6Q12454 224 aa2.22□□□□□ -2.05
UFD4YKL010C CBP1P07252 654 aa2.22□□□□□ -2.05
UFD4YKL010C SAM1P10659 382 aaKnown RBP2.22□□□□□ -2.05
UFD4YKL010C SPO16P17122 198 aa2.22□□□□□ -2.05
UFD4YKL010C AAT2P23542 418 aaKnown RBP2.22□□□□□ -2.05
UFD4YKL010C RRT12P25381 491 aa2.22□□□□□ -2.05
UFD4YKL010C YUR1P26725 428 aa2.22□□□□□ -2.05
UFD4YKL010C TFC1P32367 649 aa2.22□□□□□ -2.05
UFD4YKL010C RGT1P32862 1170 aa2.22□□□□□ -2.05
UFD4YKL010C STB5P38699 743 aa2.22□□□□□ -2.05
UFD4YKL010C APM2P38700 605 aa2.22□□□□□ -2.05
UFD4YKL010C BRL1P38770 471 aa2.22□□□□□ -2.05
UFD4YKL010C RAD55P38953 406 aa2.22□□□□□ -2.05
UFD4YKL010C FHL1P39521 936 aa2.22□□□□□ -2.05
UFD4YKL010C RPN3P40016 523 aaKnown RBP2.22□□□□□ -2.05
UFD4YKL010C IES5P40060 125 aa2.22□□□□□ -2.05
UFD4YKL010C DIM1P41819 318 aaKnown RBP2.22□□□□□ -2.05
UFD4YKL010C GCD14P46959 383 aaPredicted RBP2.22□□□□□ -2.05
UFD4YKL010C BIR1P47134 954 aa2.22□□□□□ -2.05
UFD4YKL010C RSM26P47141 266 aa2.22□□□□□ -2.05
UFD4YKL010C RFX1P48743 811 aa2.22□□□□□ -2.05
UFD4YKL010C PEX31P53203 462 aa2.22□□□□□ -2.05
UFD4YKL010C UBX4P54730 416 aa2.22□□□□□ -2.05
UFD4YKL010C YMR265CQ03508 461 aaKnown RBP2.22□□□□□ -2.05
UFD4YKL010C GPI13Q07830 1017 aa2.22□□□□□ -2.05
UFD4YKL010C AIM39Q08223 395 aa2.22□□□□□ -2.05
UFD4YKL010C ACM1Q08981 209 aa2.22□□□□□ -2.05
UFD4YKL010C YOR022CQ12204 715 aa2.22□□□□□ -2.05
UFD4YKL010C TRM11Q12463 433 aa2.22□□□□□ -2.05
UFD4YKL010C SWI6P09959 803 aa2.22□□□□□ -2.05
UFD4YKL010C SIN4P32259 974 aa2.22□□□□□ -2.05
UFD4YKL010C MET4P32389 672 aa2.22□□□□□ -2.05
UFD4YKL010C ISF1P32488 338 aa2.22□□□□□ -2.05
UFD4YKL010C PAH1P32567 862 aa2.22□□□□□ -2.05
UFD4YKL010C BCS1P32839 456 aa2.22□□□□□ -2.05
UFD4YKL010C NOP4P37838 685 aaKnown RBP2.22□□□□□ -2.05
UFD4YKL010C TBS1P38114 1094 aa2.22□□□□□ -2.05
UFD4YKL010C YBR259WP38338 688 aa2.22□□□□□ -2.05
UFD4YKL010C SEO1P39709 593 aa2.22□□□□□ -2.05
UFD4YKL010C SCC4P40090 624 aa2.22□□□□□ -2.05
UFD4YKL010C GSM1P42950 618 aa2.22□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 12.8 ms