RNA–Protein interactions for RNA: YJR139C

HOM6, Transcript of Homoserine dehydrogenase (L-homoserine:NADP oxidoreductase), yeast

Gene HOM6, Length 1,080 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HOM6	YJR139C	BEM2	P39960	2167 aa	Known RBP	13.23	□□□□□ -0.29
HOM6	YJR139C	SFL1	P20134	766 aa		13.23	□□□□□ -0.29
HOM6	YJR139C	PAP1	P29468	568 aa	Known RBP	13.23	□□□□□ -0.29
HOM6	YJR139C	ECM32	P32644	1121 aa	Known RBP	13.23	□□□□□ -0.29
HOM6	YJR139C	BIT2	P38346	545 aa		13.23	□□□□□ -0.29
HOM6	YJR139C	AIM18	P38884	321 aa		13.23	□□□□□ -0.29
HOM6	YJR139C	SAK1	P38990	1142 aa		13.23	□□□□□ -0.29
HOM6	YJR139C	END3	P39013	349 aa		13.23	□□□□□ -0.29
HOM6	YJR139C	KTR7	P40504	517 aa		13.23	□□□□□ -0.29
HOM6	YJR139C	LSB3	P43603	459 aa	Known RBP	13.23	□□□□□ -0.29
HOM6	YJR139C	ALY2	P47029	1046 aa		13.23	□□□□□ -0.29
HOM6	YJR139C	RSM26	P47141	266 aa		13.23	□□□□□ -0.29
HOM6	YJR139C	FAA4	P47912	694 aa	Known RBP	13.23	□□□□□ -0.29
HOM6	YJR139C	NMA2	P53204	395 aa		13.23	□□□□□ -0.29
HOM6	YJR139C	YGR127W	P53275	312 aa		13.23	□□□□□ -0.29
HOM6	YJR139C	CWC22	P53333	577 aa	Known RBP	13.23	□□□□□ -0.29
HOM6	YJR139C	GRX8	Q05926	109 aa		13.23	□□□□□ -0.29
HOM6	YJR139C	EFG1	Q3E705	233 aa	Known RBP	13.23	□□□□□ -0.29
HOM6	YJR139C	DUN1	P39009	513 aa		13.22	□□□□□ -0.29
HOM6	YJR139C	STL1	P39932	569 aa		13.22	□□□□□ -0.29
HOM6	YJR139C	RPS10B	P46784	105 aa	Known RBP	13.22	□□□□□ -0.29
HOM6	YJR139C	RFX1	P48743	811 aa		13.22	□□□□□ -0.29
HOM6	YJR139C	INP2	Q03824	705 aa		13.22	□□□□□ -0.29
HOM6	YJR139C	YPR084W	Q06821	456 aa		13.22	□□□□□ -0.29
HOM6	YJR139C	RPS10A	Q08745	105 aa	Predicted RBP	13.22	□□□□□ -0.29
HOM6	YJR139C	YDR018C	Q12185	396 aa		13.22	□□□□□ -0.29
HOM6	YJR139C	MCM16	Q12262	181 aa		13.22	□□□□□ -0.29
HOM6	YJR139C	SEY1	Q99287	776 aa		13.22	□□□□□ -0.29
HOM6	YJR139C	SRP68	P38687	599 aa	Known RBP	13.21	□□□□□ -0.29
HOM6	YJR139C	SMF1	P38925	575 aa		13.21	□□□□□ -0.29
HOM6	YJR139C	EXO1	P39875	702 aa		13.21	□□□□□ -0.29
HOM6	YJR139C	NDC80	P40460	691 aa		13.21	□□□□□ -0.29
HOM6	YJR139C	YJL132W	P47014	750 aa		13.21	□□□□□ -0.29
HOM6	YJR139C	TCB2	P48231	1178 aa		13.21	□□□□□ -0.29
HOM6	YJR139C	VPS9	P54787	451 aa		13.21	□□□□□ -0.29
HOM6	YJR139C	YSH1	Q06224	779 aa	Predicted RBP	13.21	□□□□□ -0.29
HOM6	YJR139C	ZRT2	Q12436	422 aa		13.21	□□□□□ -0.29
HOM6	YJR139C	FPR1	P20081	114 aa	Known RBP	13.2	□□□□□ -0.3
HOM6	YJR139C	ADD66	P36040	267 aa		13.2	□□□□□ -0.3
HOM6	YJR139C	MRPL40	P36534	297 aa		13.2	□□□□□ -0.3
HOM6	YJR139C	ATM1	P40416	690 aa		13.2	□□□□□ -0.3
HOM6	YJR139C	YIR007W	P40566	764 aa		13.2	□□□□□ -0.3
HOM6	YJR139C	NRD1	P53617	575 aa	Known RBP RIP-Chip data	13.2	□□□□□ -0.3	not detected
HOM6	YJR139C	YNR063W	P53749	607 aa		13.2	□□□□□ -0.3
HOM6	YJR139C	POB3	Q04636	552 aa	Known RBP	13.2	□□□□□ -0.3
HOM6	YJR139C	AIM41	Q12032	185 aa		13.2	□□□□□ -0.3
HOM6	YJR139C	AFI1	Q99222	893 aa		13.2	□□□□□ -0.3
HOM6	YJR139C	MSF1	P08425	469 aa		13.19	□□□□□ -0.3
HOM6	YJR139C	HCM1	P25364	564 aa		13.19	□□□□□ -0.3
HOM6	YJR139C	SPT23	P35210	1082 aa		13.19	□□□□□ -0.3
HOM6	YJR139C	FUI1	P38196	639 aa		13.19	□□□□□ -0.3
HOM6	YJR139C	OTU2	P38747	307 aa	Known RBP	13.19	□□□□□ -0.3
HOM6	YJR139C	RPC17	P47076	161 aa		13.19	□□□□□ -0.3
HOM6	YJR139C	TRF5	P48561	642 aa	Known RBP	13.19	□□□□□ -0.3
HOM6	YJR139C	ASN2	P49090	572 aa	Known RBP	13.19	□□□□□ -0.3
HOM6	YJR139C	AMA1	P50082	593 aa		13.19	□□□□□ -0.3
HOM6	YJR139C	PYK2	P52489	506 aa	Known RBP	13.19	□□□□□ -0.3
HOM6	YJR139C	RIM8	P53179	542 aa		13.19	□□□□□ -0.3
HOM6	YJR139C	SWC7	Q06707	132 aa		13.19	□□□□□ -0.3
HOM6	YJR139C	MSH2	P25847	964 aa		13.18	□□□□□ -0.3
HOM6	YJR139C	MVP1	P40959	511 aa	Known RBP	13.18	□□□□□ -0.3
HOM6	YJR139C	FLC3	P53121	802 aa		13.18	□□□□□ -0.3
HOM6	YJR139C	RSB1	Q08417	382 aa		13.18	□□□□□ -0.3
HOM6	YJR139C	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	13.18	□□□□□ -0.3	not detected
HOM6	YJR139C	FAP7	Q12055	197 aa	Predicted RBP	13.18	□□□□□ -0.3
HOM6	YJR139C	YLL056C	Q12177	298 aa		13.18	□□□□□ -0.3
HOM6	YJR139C	ENO1	P00924	437 aa	Known RBP	13.17	□□□□□ -0.3
HOM6	YJR139C	MIS1	P09440	975 aa	Known RBP	13.17	□□□□□ -0.3
HOM6	YJR139C	DAL81	P21657	970 aa		13.17	□□□□□ -0.3
HOM6	YJR139C	STE13	P33894	931 aa		13.17	□□□□□ -0.3
HOM6	YJR139C	DIA4	P38705	446 aa	Predicted RBP	13.17	□□□□□ -0.3
HOM6	YJR139C	PPE1	P38796	400 aa		13.17	□□□□□ -0.3
HOM6	YJR139C	FMO1	P38866	432 aa		13.17	□□□□□ -0.3
HOM6	YJR139C	OSW5	P40219	148 aa		13.17	□□□□□ -0.3
HOM6	YJR139C	TDA9	Q04545	1251 aa		13.17	□□□□□ -0.3
HOM6	YJR139C	ECI1	Q05871	280 aa		13.17	□□□□□ -0.3
HOM6	YJR139C	YLR046C	Q12253	270 aa		13.17	□□□□□ -0.3
HOM6	YJR139C	HOM2	P13663	365 aa	Known RBP	13.16	□□□□□ -0.3
HOM6	YJR139C	KAR9	P32526	644 aa		13.16	□□□□□ -0.3
HOM6	YJR139C	MRS6	P32864	603 aa	Known RBP	13.16	□□□□□ -0.3
HOM6	YJR139C	YMR134W	P40207	237 aa		13.16	□□□□□ -0.3
HOM6	YJR139C	DLD2	P46681	530 aa	Known RBP	13.16	□□□□□ -0.3
HOM6	YJR139C	NMA111	P53920	997 aa		13.16	□□□□□ -0.3
HOM6	YJR139C	MTG1	Q03151	367 aa	Predicted RBP	13.16	□□□□□ -0.3
HOM6	YJR139C	YMR187C	Q03236	431 aa		13.16	□□□□□ -0.3
HOM6	YJR139C	URH1	Q04179	340 aa		13.16	□□□□□ -0.3
HOM6	YJR139C	PYC1	P11154	1178 aa	Known RBP	13.15	□□□□□ -0.3
HOM6	YJR139C	GUT1	P32190	709 aa		13.15	□□□□□ -0.3
HOM6	YJR139C	RAD5	P32849	1169 aa	Predicted RBP	13.15	□□□□□ -0.3
HOM6	YJR139C	MSG5	P38590	489 aa		13.15	□□□□□ -0.3
HOM6	YJR139C	CRP1	P38845	465 aa	Known RBP	13.15	□□□□□ -0.3
HOM6	YJR139C	RSM7	P47150	247 aa		13.15	□□□□□ -0.3
HOM6	YJR139C	CWC24	P53769	259 aa		13.15	□□□□□ -0.3
HOM6	YJR139C	PIR1	Q03178	341 aa		13.15	□□□□□ -0.3
HOM6	YJR139C	ESC2	Q06340	456 aa		13.15	□□□□□ -0.3
HOM6	YJR139C	AAD15	Q08361	143 aa		13.15	□□□□□ -0.3
HOM6	YJR139C	PUF4	P25339	888 aa	Known RBP RIP-Chip data	13.14	□□□□□ -0.31	not detected
HOM6	YJR139C	GEX1	P25596	615 aa		13.14	□□□□□ -0.31
HOM6	YJR139C	GEX2	P36173	615 aa		13.14	□□□□□ -0.31
HOM6	YJR139C	APM3	P38153	483 aa		13.14	□□□□□ -0.31

Retrieved 100 of 5,963 RNA–protein pairs in 19.7 ms