RNA–Protein interactions for RNA: YIR005W

IST3, Transcript of Component of the U2 snRNP, yeast

Gene IST3, Length 447 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
IST3	YIR005W	DSS4	P32601	143 aa		4.12	□□□□□ -1.75
IST3	YIR005W	IRC7	P43623	340 aa		4.12	□□□□□ -1.75
IST3	YIR005W	PEF1	P53238	335 aa		4.12	□□□□□ -1.75
IST3	YIR005W	RNH70	P53331	553 aa		4.12	□□□□□ -1.75
IST3	YIR005W	COP1	P53622	1201 aa	Known RBP	4.12	□□□□□ -1.75
IST3	YIR005W	SEC12	P11655	471 aa		4.11	□□□□□ -1.75
IST3	YIR005W	BET2	P20133	325 aa		4.11	□□□□□ -1.75
IST3	YIR005W	AEP2	P22136	580 aa		4.11	□□□□□ -1.75
IST3	YIR005W	PMT3	P47190	753 aa		4.11	□□□□□ -1.75
IST3	YIR005W	YPK1	P12688	680 aa	Known RBP	4.1	□□□□□ -1.75
IST3	YIR005W	COQ3	P27680	312 aa		4.1	□□□□□ -1.75
IST3	YIR005W	HXT4	P32467	576 aa		4.1	□□□□□ -1.75
IST3	YIR005W	CDC5	P32562	705 aa		4.1	□□□□□ -1.75
IST3	YIR005W	RMA1	P36001	430 aa	Known RBP	4.1	□□□□□ -1.75
IST3	YIR005W	RNR4	P49723	345 aa	Known RBP	4.1	□□□□□ -1.75
IST3	YIR005W	DNM1	P54861	757 aa		4.1	□□□□□ -1.75
IST3	YIR005W	MTD1	Q02046	320 aa	Known RBP	4.1	□□□□□ -1.75
IST3	YIR005W	UME1	Q03010	460 aa		4.1	□□□□□ -1.75
IST3	YIR005W	CET1	O13297	549 aa	Predicted RBP	4.09	□□□□□ -1.75
IST3	YIR005W	PCK1	P10963	549 aa		4.09	□□□□□ -1.75
IST3	YIR005W	YNL058C	P53947	316 aa		4.09	□□□□□ -1.75
IST3	YIR005W	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	4.09	□□□□□ -1.75	not detected
IST3	YIR005W	PNO1	Q99216	274 aa	Known RBP	4.09	□□□□□ -1.75
IST3	YIR005W	AIM44	Q99299	758 aa		4.09	□□□□□ -1.75
IST3	YIR005W	NUP145	P49687	1317 aa		4.09	□□□□□ -1.75
IST3	YIR005W	CBP3	P21560	335 aa		4.08	□□□□□ -1.76
IST3	YIR005W	ATO2	P32907	282 aa		4.08	□□□□□ -1.76
IST3	YIR005W	YNL092W	P53934	400 aa		4.08	□□□□□ -1.76
IST3	YIR005W	YCP4	P25349	247 aa	Known RBP	4.07	□□□□□ -1.76
IST3	YIR005W	GDA1	P32621	518 aa		4.07	□□□□□ -1.76
IST3	YIR005W	GCS1	P35197	352 aa		4.07	□□□□□ -1.76
IST3	YIR005W	SDH8	P38345	138 aa		4.07	□□□□□ -1.76
IST3	YIR005W	RRP8	P38961	392 aa	Known RBP	4.07	□□□□□ -1.76
IST3	YIR005W	CIR1	P42940	261 aa		4.07	□□□□□ -1.76
IST3	YIR005W	RAD33	Q04231	177 aa		4.07	□□□□□ -1.76
IST3	YIR005W	NGL1	Q08213	363 aa	Known RBP	4.07	□□□□□ -1.76
IST3	YIR005W	BUD7	Q08754	746 aa		4.07	□□□□□ -1.76
IST3	YIR005W	VPS5	Q92331	675 aa		4.07	□□□□□ -1.76
IST3	YIR005W	YEL076C-A	P0CX16	216 aa		4.06	□□□□□ -1.76
IST3	YIR005W	YLR464W	P0CX17	216 aa		4.06	□□□□□ -1.76
IST3	YIR005W	CWH43	P25618	953 aa		4.06	□□□□□ -1.76
IST3	YIR005W	FTH1	P38310	465 aa		4.06	□□□□□ -1.76
IST3	YIR005W	SRP68	P38687	599 aa	Known RBP	4.06	□□□□□ -1.76
IST3	YIR005W	YEL076C	P39971	216 aa		4.06	□□□□□ -1.76
IST3	YIR005W	MAF1	P41910	395 aa		4.06	□□□□□ -1.76
IST3	YIR005W	RPL15B	P54780	204 aa	Predicted RBP	4.06	□□□□□ -1.76
IST3	YIR005W	AIM17	P23180	465 aa	Known RBP	4.05	□□□□□ -1.76
IST3	YIR005W	CCT4	P39078	528 aa	Known RBP	4.05	□□□□□ -1.76
IST3	YIR005W	YAT2	P40017	923 aa		4.05	□□□□□ -1.76
IST3	YIR005W	RAD26	P40352	1085 aa		4.05	□□□□□ -1.76
IST3	YIR005W	GPP1	P41277	250 aa	Known RBP	4.05	□□□□□ -1.76
IST3	YIR005W	GPG1	P53130	126 aa		4.05	□□□□□ -1.76
IST3	YIR005W	COG2	P53271	262 aa		4.05	□□□□□ -1.76
IST3	YIR005W	SNU56	Q03782	492 aa	Known RBP	4.05	□□□□□ -1.76
IST3	YIR005W	SRL1	Q08673	210 aa		4.05	□□□□□ -1.76
IST3	YIR005W	YOR111W	Q99210	232 aa		4.05	□□□□□ -1.76
IST3	YIR005W	YPT1	P01123	206 aa	Known RBP	4.04	□□□□□ -1.76
IST3	YIR005W	ILS1	P09436	1072 aa	Known RBP	4.04	□□□□□ -1.76
IST3	YIR005W	LAS21	P40367	830 aa		4.04	□□□□□ -1.76
IST3	YIR005W	MDV1	P47025	714 aa		4.04	□□□□□ -1.76
IST3	YIR005W	LYS20	P48570	428 aa	Known RBP	4.04	□□□□□ -1.76
IST3	YIR005W	MDR1	P53258	950 aa		4.04	□□□□□ -1.76
IST3	YIR005W	VTC3	Q02725	835 aa		4.04	□□□□□ -1.76
IST3	YIR005W	CHO2	P05374	869 aa	Known RBP	4.03	□□□□□ -1.76
IST3	YIR005W	MAK32	P23060	363 aa		4.03	□□□□□ -1.76
IST3	YIR005W	TOM71	P38825	639 aa	Known RBP	4.03	□□□□□ -1.76
IST3	YIR005W	FLO5	P38894	1075 aa		4.03	□□□□□ -1.76
IST3	YIR005W	MAM1	P40065	302 aa		4.03	□□□□□ -1.76
IST3	YIR005W	PEA2	P40091	420 aa		4.03	□□□□□ -1.76
IST3	YIR005W	IRC5	P43610	853 aa		4.03	□□□□□ -1.76
IST3	YIR005W	YPR027C	Q12079	277 aa		4.03	□□□□□ -1.76
IST3	YIR005W	ATP12	P22135	325 aa		4.02	□□□□□ -1.77
IST3	YIR005W	PLC1	P32383	869 aa		4.02	□□□□□ -1.77
IST3	YIR005W	RPT3	P33298	428 aa	Known RBP	4.02	□□□□□ -1.77
IST3	YIR005W	SER1	P33330	395 aa	Known RBP	4.02	□□□□□ -1.77
IST3	YIR005W	IMD2	P38697	523 aa	Known RBP	4.02	□□□□□ -1.77
IST3	YIR005W	NMD2	P38798	1089 aa	Known RBP	4.02	□□□□□ -1.77
IST3	YIR005W	YIR016W	P40572	265 aa		4.02	□□□□□ -1.77
IST3	YIR005W	IMD3	P50095	523 aa	Known RBP	4.02	□□□□□ -1.77
IST3	YIR005W	SNA4	Q07549	140 aa		4.02	□□□□□ -1.77
IST3	YIR005W	FAP7	Q12055	197 aa	Predicted RBP	4.02	□□□□□ -1.77
IST3	YIR005W	GET3	Q12154	354 aa	Known RBP	4.02	□□□□□ -1.77
IST3	YIR005W	KES1	P35844	434 aa	Known RBP	4.01	□□□□□ -1.77
IST3	YIR005W	CIN1	P40987	1014 aa		4.01	□□□□□ -1.77
IST3	YIR005W	NOP2	P40991	618 aa	Known RBP	4.01	□□□□□ -1.77
IST3	YIR005W	YNR029C	P53729	429 aa	Known RBP	4.01	□□□□□ -1.77
IST3	YIR005W	BOP3	P53958	396 aa		4.01	□□□□□ -1.77
IST3	YIR005W	SKY1	Q03656	742 aa		4.01	□□□□□ -1.77
IST3	YIR005W	RRP43	P25359	394 aa	Predicted RBP	4	□□□□□ -1.77
IST3	YIR005W	MTG2	P38860	518 aa		4	□□□□□ -1.77
IST3	YIR005W	YGR237C	P50089	785 aa		4	□□□□□ -1.77
IST3	YIR005W	MNT2	P53059	558 aa		4	□□□□□ -1.77
IST3	YIR005W	DSE3	Q08729	430 aa		4	□□□□□ -1.77
IST3	YIR005W	ATX2	Q12067	313 aa		4	□□□□□ -1.77
IST3	YIR005W	LYS21	Q12122	440 aa	Known RBP	4	□□□□□ -1.77
IST3	YIR005W	UBX3	Q12229	455 aa		4	□□□□□ -1.77
IST3	YIR005W	LCB4	Q12246	624 aa		4	□□□□□ -1.77
IST3	YIR005W	RMP1	Q12530	201 aa		4	□□□□□ -1.77
IST3	YIR005W	AMD2	P22580	549 aa		3.99	□□□□□ -1.77
IST3	YIR005W	ARG1	P22768	420 aa		3.99	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 22.6 ms