RNA–Protein interactions for RNA: YHL022C

SPO11, Transcript of Meiosis-specific protein that initiates meiotic recombination, yeast

Gene SPO11, Length 1,197 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPO11	YHL022C	DIN7	Q12086	430 aa		4.58	□□□□□ -1.68
SPO11	YHL022C	CDC5	P32562	705 aa		4.57	□□□□□ -1.68
SPO11	YHL022C	TFC4	P33339	1025 aa		4.57	□□□□□ -1.68
SPO11	YHL022C	STB5	P38699	743 aa		4.57	□□□□□ -1.68
SPO11	YHL022C	STL1	P39932	569 aa		4.57	□□□□□ -1.68
SPO11	YHL022C	TDA10	P42938	290 aa		4.57	□□□□□ -1.68
SPO11	YHL022C	YNR071C	P53757	342 aa		4.57	□□□□□ -1.68
SPO11	YHL022C	YNL092W	P53934	400 aa		4.57	□□□□□ -1.68
SPO11	YHL022C	PEX15	Q08215	383 aa		4.57	□□□□□ -1.68
SPO11	YHL022C	PRS5	Q12265	496 aa	Known RBP	4.57	□□□□□ -1.68
SPO11	YHL022C	YJU2	P28320	278 aa	Predicted RBP	4.56	□□□□□ -1.68
SPO11	YHL022C	COS12	P53053	380 aa		4.56	□□□□□ -1.68
SPO11	YHL022C	SEC5	P89102	971 aa		4.56	□□□□□ -1.68
SPO11	YHL022C	STP1	Q00947	519 aa		4.56	□□□□□ -1.68
SPO11	YHL022C	IRC3	Q06683	689 aa		4.56	□□□□□ -1.68
SPO11	YHL022C	HOS1	Q12214	470 aa		4.56	□□□□□ -1.68
SPO11	YHL022C	RGT2	Q12300	763 aa		4.56	□□□□□ -1.68
SPO11	YHL022C	AHA1	Q12449	350 aa	Known RBP	4.56	□□□□□ -1.68
SPO11	YHL022C	GSY2	P27472	705 aa		4.55	□□□□□ -1.68
SPO11	YHL022C	PLC1	P32383	869 aa		4.55	□□□□□ -1.68
SPO11	YHL022C	APD1	P38281	316 aa		4.55	□□□□□ -1.68
SPO11	YHL022C	EMP65	P40085	556 aa		4.55	□□□□□ -1.68
SPO11	YHL022C	OPT1	P40897	799 aa		4.55	□□□□□ -1.68
SPO11	YHL022C	PSA1	P41940	361 aa	Known RBP	4.55	□□□□□ -1.68
SPO11	YHL022C	SAE2	P46946	345 aa		4.55	□□□□□ -1.68
SPO11	YHL022C	NMD5	P46970	1048 aa		4.55	□□□□□ -1.68
SPO11	YHL022C	HOL1	P53389	586 aa		4.55	□□□□□ -1.68
SPO11	YHL022C	BSP1	Q06604	576 aa		4.55	□□□□□ -1.68
SPO11	YHL022C	RDL1	Q12305	139 aa	Known RBP	4.55	□□□□□ -1.68
SPO11	YHL022C	YLR111W	Q12528	110 aa		4.55	□□□□□ -1.68
SPO11	YHL022C	KAR1	P11927	433 aa		4.54	□□□□□ -1.68
SPO11	YHL022C	PET309	P32522	965 aa	Predicted RBP	4.54	□□□□□ -1.68
SPO11	YHL022C	GDA1	P32621	518 aa		4.54	□□□□□ -1.68
SPO11	YHL022C	SDH8	P38345	138 aa		4.54	□□□□□ -1.68
SPO11	YHL022C	YIL092W	P40497	633 aa		4.54	□□□□□ -1.68
SPO11	YHL022C	RSC9	Q03124	581 aa		4.54	□□□□□ -1.68
SPO11	YHL022C	HRD3	Q05787	833 aa		4.54	□□□□□ -1.68
SPO11	YHL022C	BPL1	P48445	690 aa	Predicted RBP	4.53	□□□□□ -1.68
SPO11	YHL022C	YML119W	Q03208	357 aa		4.53	□□□□□ -1.68
SPO11	YHL022C	RAD33	Q04231	177 aa		4.53	□□□□□ -1.68
SPO11	YHL022C	CBP3	P21560	335 aa		4.52	□□□□□ -1.69
SPO11	YHL022C	URE2	P23202	354 aa	Known RBP	4.52	□□□□□ -1.69
SPO11	YHL022C	ECM32	P32644	1121 aa	Known RBP	4.52	□□□□□ -1.69
SPO11	YHL022C	GSM1	P42950	618 aa		4.52	□□□□□ -1.69
SPO11	YHL022C	PEX14	P53112	341 aa		4.52	□□□□□ -1.69
SPO11	YHL022C	PHM6	Q05637	104 aa		4.52	□□□□□ -1.69
SPO11	YHL022C	CYK3	Q07533	885 aa		4.52	□□□□□ -1.69
SPO11	YHL022C	CRT10	Q08226	957 aa		4.52	□□□□□ -1.69
SPO11	YHL022C	DBP10	Q12389	995 aa	Known RBP	4.52	□□□□□ -1.69
SPO11	YHL022C	SPN1	Q06505	410 aa	Predicted RBP	4.51	□□□□□ -1.69
SPO11	YHL022C	GEP3	Q08622	556 aa		4.51	□□□□□ -1.69
SPO11	YHL022C	SLX4	Q12098	748 aa		4.51	□□□□□ -1.69
SPO11	YHL022C	Q0010	Q9ZZX9	128 aa		4.51	□□□□□ -1.69
SPO11	YHL022C	AMD2	P22580	549 aa		4.5	□□□□□ -1.69
SPO11	YHL022C	PAF1	P38351	445 aa		4.5	□□□□□ -1.69
SPO11	YHL022C	MTG2	P38860	518 aa		4.5	□□□□□ -1.69
SPO11	YHL022C	SSP120	P39931	234 aa	Known RBP	4.5	□□□□□ -1.69
SPO11	YHL022C	SCS2	P40075	244 aa	Known RBP	4.5	□□□□□ -1.69
SPO11	YHL022C	SNO3	P43544	222 aa		4.5	□□□□□ -1.69
SPO11	YHL022C	FOL1	P53848	824 aa		4.5	□□□□□ -1.69
SPO11	YHL022C	ERG13	P54839	491 aa	Known RBP	4.5	□□□□□ -1.69
SPO11	YHL022C	PSF3	Q12146	194 aa		4.5	□□□□□ -1.69
SPO11	YHL022C	PRE2	P30656	287 aa	Known RBP	4.49	□□□□□ -1.69
SPO11	YHL022C	VPS8	P39702	1274 aa		4.49	□□□□□ -1.69
SPO11	YHL022C	UBP16	Q02863	499 aa		4.49	□□□□□ -1.69
SPO11	YHL022C	YPL071C	Q02864	156 aa		4.49	□□□□□ -1.69
SPO11	YHL022C	TPO3	Q06451	622 aa		4.49	□□□□□ -1.69
SPO11	YHL022C	NUR1	Q12066	484 aa		4.49	□□□□□ -1.69
SPO11	YHL022C	YMR085W	P0CF18	432 aa		4.48	□□□□□ -1.69
SPO11	YHL022C	PHO3	P24031	467 aa		4.48	□□□□□ -1.69
SPO11	YHL022C	RRP43	P25359	394 aa	Predicted RBP	4.48	□□□□□ -1.69
SPO11	YHL022C	IDS2	P46958	469 aa		4.48	□□□□□ -1.69
SPO11	YHL022C	IDP3	P53982	420 aa	Known RBP	4.48	□□□□□ -1.69
SPO11	YHL022C	MPS1	P54199	764 aa		4.48	□□□□□ -1.69
SPO11	YHL022C	ACS1	Q01574	713 aa		4.48	□□□□□ -1.69
SPO11	YHL022C	ENT2	Q05785	613 aa		4.48	□□□□□ -1.69
SPO11	YHL022C	PNO1	Q99216	274 aa	Known RBP	4.48	□□□□□ -1.69
SPO11	YHL022C	AIM44	Q99299	758 aa		4.48	□□□□□ -1.69
SPO11	YHL022C	BI2	P03873	423 aa		4.47	□□□□□ -1.69
SPO11	YHL022C	TGL1	P34163	548 aa		4.47	□□□□□ -1.69
SPO11	YHL022C	IMD2	P38697	523 aa	Known RBP	4.47	□□□□□ -1.69
SPO11	YHL022C	ARO9	P38840	513 aa	Predicted RBP	4.47	□□□□□ -1.69
SPO11	YHL022C	IMD3	P50095	523 aa	Known RBP	4.47	□□□□□ -1.69
SPO11	YHL022C	YML053C	Q04978	212 aa		4.47	□□□□□ -1.69
SPO11	YHL022C	CIR2	Q08822	631 aa		4.47	□□□□□ -1.69
SPO11	YHL022C	CHO2	P05374	869 aa	Known RBP	4.46	□□□□□ -1.7
SPO11	YHL022C	YAP1	P19880	650 aa	Known RBP	4.46	□□□□□ -1.7
SPO11	YHL022C	PRP45	P28004	379 aa	Predicted RBP	4.46	□□□□□ -1.7
SPO11	YHL022C	SAP1	P39955	897 aa	Known RBP	4.46	□□□□□ -1.7
SPO11	YHL022C	VFA1	P40080	203 aa		4.46	□□□□□ -1.7
SPO11	YHL022C	IMA5	P40884	581 aa		4.46	□□□□□ -1.7
SPO11	YHL022C	COG2	P53271	262 aa		4.46	□□□□□ -1.7
SPO11	YHL022C	TRS31	Q03337	283 aa		4.46	□□□□□ -1.7
SPO11	YHL022C	LCB4	Q12246	624 aa		4.46	□□□□□ -1.7
SPO11	YHL022C	CRC1	Q12289	327 aa		4.46	□□□□□ -1.7
SPO11	YHL022C	RTC1	Q08281	1341 aa		4.46	□□□□□ -1.7
SPO11	YHL022C	VAS1	P07806	1104 aa	Known RBP	4.45	□□□□□ -1.7
SPO11	YHL022C	ADH4	P10127	382 aa		4.45	□□□□□ -1.7
SPO11	YHL022C	YCR061W	P25639	631 aa		4.45	□□□□□ -1.7
SPO11	YHL022C	MAM1	P40065	302 aa		4.45	□□□□□ -1.7

Retrieved 100 of 5,963 RNA–protein pairs in 44.9 ms