RNA–Protein interactions for RNA: YGL172W

NUP49, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP49, Length 1,419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP49YGL172W ALY2P47029 1046 aa7□□□□□ -1.29
NUP49YGL172W COQ6P53318 479 aa7□□□□□ -1.29
NUP49YGL172W COP1P53622 1201 aaKnown RBP7□□□□□ -1.29
NUP49YGL172W YMR187CQ03236 431 aa7□□□□□ -1.29
NUP49YGL172W TDA9Q04545 1251 aa7□□□□□ -1.29
NUP49YGL172W YOR387CQ08910 206 aa7□□□□□ -1.29
NUP49YGL172W YDR018CQ12185 396 aa7□□□□□ -1.29
NUP49YGL172W IZH4Q99393 312 aa7□□□□□ -1.29
NUP49YGL172W BET2P20133 325 aa6.99□□□□□ -1.29
NUP49YGL172W SIR1P21691 654 aa6.99□□□□□ -1.29
NUP49YGL172W YCR015CP25616 317 aa6.99□□□□□ -1.29
NUP49YGL172W PPZ1P26570 692 aa6.99□□□□□ -1.29
NUP49YGL172W BYE1P36106 594 aa6.99□□□□□ -1.29
NUP49YGL172W PPX1P38698 397 aa6.99□□□□□ -1.29
NUP49YGL172W LAM1P38851 1228 aa6.99□□□□□ -1.29
NUP49YGL172W ARG2P40360 574 aa6.99□□□□□ -1.29
NUP49YGL172W RRT5P43607 289 aa6.99□□□□□ -1.29
NUP49YGL172W RTT101P47050 842 aa6.99□□□□□ -1.29
NUP49YGL172W YJR079WP47126 109 aa6.99□□□□□ -1.29
NUP49YGL172W TRM112P53738 135 aaPredicted RBP6.99□□□□□ -1.29
NUP49YGL172W MTG1Q03151 367 aaPredicted RBP6.99□□□□□ -1.29
NUP49YGL172W YDR344CQ05510 147 aa6.99□□□□□ -1.29
NUP49YGL172W CDC73Q06697 393 aa6.99□□□□□ -1.29
NUP49YGL172W TPO1Q07824 586 aa6.99□□□□□ -1.29
NUP49YGL172W HIS1P00498 297 aaKnown RBP6.98□□□□□ -1.29
NUP49YGL172W PET111P08468 800 aa6.98□□□□□ -1.29
NUP49YGL172W KEX2P13134 814 aa6.98□□□□□ -1.29
NUP49YGL172W IMG2P25642 146 aaPredicted RBP6.98□□□□□ -1.29
NUP49YGL172W SEC6P32844 805 aa6.98□□□□□ -1.29
NUP49YGL172W YKL097CP34245 136 aa6.98□□□□□ -1.29
NUP49YGL172W KTR4P38131 464 aa6.98□□□□□ -1.29
NUP49YGL172W PBP2P38151 413 aaKnown RBP RIP-Chip data6.98□□□□□ -1.29not detected
NUP49YGL172W ATG12P38316 186 aa6.98□□□□□ -1.29
NUP49YGL172W TIF5P38431 405 aaKnown RBP6.98□□□□□ -1.29
NUP49YGL172W MSG5P38590 489 aa6.98□□□□□ -1.29
NUP49YGL172W SAK1P38990 1142 aa6.98□□□□□ -1.29
NUP49YGL172W CCT4P39078 528 aaKnown RBP6.98□□□□□ -1.29
NUP49YGL172W EDC3P39998 551 aaKnown RBP6.98□□□□□ -1.29
NUP49YGL172W YMR134WP40207 237 aa6.98□□□□□ -1.29
NUP49YGL172W EMW1P42842 904 aaKnown RBP6.98□□□□□ -1.29
NUP49YGL172W RRB1Q04225 511 aaKnown RBP6.98□□□□□ -1.29
NUP49YGL172W VTI1Q04338 217 aa6.98□□□□□ -1.29
NUP49YGL172W YDL073WQ07454 984 aa6.98□□□□□ -1.29
NUP49YGL172W NOP14Q99207 810 aaKnown RBP6.98□□□□□ -1.29
NUP49YGL172W TRM1P15565 570 aaKnown RBP6.97□□□□□ -1.29
NUP49YGL172W PUF4P25339 888 aaKnown RBP RIP-Chip data6.97□□□□□ -1.29not detected
NUP49YGL172W ADY2P25613 283 aa6.97□□□□□ -1.29
NUP49YGL172W GCD6P32501 712 aaKnown RBP6.97□□□□□ -1.29
NUP49YGL172W GCG1P32656 232 aaKnown RBP6.97□□□□□ -1.29
NUP49YGL172W SGE1P33335 543 aa6.97□□□□□ -1.29
NUP49YGL172W AIM18P38884 321 aa6.97□□□□□ -1.29
NUP49YGL172W STL1P39932 569 aa6.97□□□□□ -1.29
NUP49YGL172W ATG36P46983 293 aa6.97□□□□□ -1.29
NUP49YGL172W MNN11P46985 422 aaKnown RBP6.97□□□□□ -1.29
NUP49YGL172W RFX1P48743 811 aa6.97□□□□□ -1.29
NUP49YGL172W TAN1P53072 289 aaPredicted RBP6.97□□□□□ -1.29
NUP49YGL172W YGR127WP53275 312 aa6.97□□□□□ -1.29
NUP49YGL172W MAL13P53338 473 aa6.97□□□□□ -1.29
NUP49YGL172W MAP1Q01662 387 aaKnown RBP RIP-Chip data6.97□□□□□ -1.29not detected
NUP49YGL172W HOS3Q02959 697 aaKnown RBP6.97□□□□□ -1.29
NUP49YGL172W RPN4Q03465 531 aa6.97□□□□□ -1.29
NUP49YGL172W SEG1Q04279 960 aa6.97□□□□□ -1.29
NUP49YGL172W ECM38Q05902 660 aaPredicted RBP6.97□□□□□ -1.29
NUP49YGL172W FAP7Q12055 197 aaPredicted RBP6.97□□□□□ -1.29
NUP49YGL172W EFG1Q3E705 233 aaKnown RBP6.97□□□□□ -1.29
NUP49YGL172W SGF29P25554 259 aa6.96□□□□□ -1.3
NUP49YGL172W MET22P32179 357 aa6.96□□□□□ -1.3
NUP49YGL172W AIM26P32858 118 aa6.96□□□□□ -1.3
NUP49YGL172W POL12P38121 705 aaPredicted RBP6.96□□□□□ -1.3
NUP49YGL172W BIT2P38346 545 aa6.96□□□□□ -1.3
NUP49YGL172W MMS21P38632 267 aa6.96□□□□□ -1.3
NUP49YGL172W MED6P38782 295 aa6.96□□□□□ -1.3
NUP49YGL172W YEL028WP39989 153 aa6.96□□□□□ -1.3
NUP49YGL172W UBP7P40453 1071 aa6.96□□□□□ -1.3
NUP49YGL172W RGD2P43556 714 aa6.96□□□□□ -1.3
NUP49YGL172W BST1P43571 1029 aa6.96□□□□□ -1.3
NUP49YGL172W PRP24P49960 444 aaKnown RBP6.96□□□□□ -1.3
NUP49YGL172W TOF2Q02208 771 aa6.96□□□□□ -1.3
NUP49YGL172W UTP6Q02354 440 aaKnown RBP6.96□□□□□ -1.3
NUP49YGL172W YHM2Q04013 314 aa6.96□□□□□ -1.3
NUP49YGL172W TMN2Q04562 672 aa6.96□□□□□ -1.3
NUP49YGL172W RTN1Q04947 295 aaKnown RBP6.96□□□□□ -1.3
NUP49YGL172W ATG23Q06671 453 aa6.96□□□□□ -1.3
NUP49YGL172W APL5Q08951 932 aaKnown RBP6.96□□□□□ -1.3
NUP49YGL172W WHI5Q12416 295 aa6.96□□□□□ -1.3
NUP49YGL172W PDH1Q12428 516 aaKnown RBP6.96□□□□□ -1.3
NUP49YGL172W SEY1Q99287 776 aa6.96□□□□□ -1.3
NUP49YGL172W HSF1P10961 833 aa6.95□□□□□ -1.3
NUP49YGL172W PUP3P25451 205 aaKnown RBP6.95□□□□□ -1.3
NUP49YGL172W GPI10P30777 616 aa6.95□□□□□ -1.3
NUP49YGL172W CNS1P33313 385 aa6.95□□□□□ -1.3
NUP49YGL172W ECM2P38241 364 aaKnown RBP6.95□□□□□ -1.3
NUP49YGL172W VHC1P38329 1120 aa6.95□□□□□ -1.3
NUP49YGL172W DIA4P38705 446 aaPredicted RBP6.95□□□□□ -1.3
NUP49YGL172W CEP3P40969 608 aa6.95□□□□□ -1.3
NUP49YGL172W RPS10BP46784 105 aaKnown RBP6.95□□□□□ -1.3
NUP49YGL172W SNG1P46950 547 aa6.95□□□□□ -1.3
NUP49YGL172W NMD5P46970 1048 aa6.95□□□□□ -1.3
NUP49YGL172W HLJ1P48353 224 aa6.95□□□□□ -1.3
NUP49YGL172W TUB4P53378 473 aa6.95□□□□□ -1.3
Retrieved 100 of 5,963 RNA–protein pairs in 50.4 ms