RNA–Protein interactions for RNA: YDR432W

NPL3, Transcript of RNA-binding protein, yeast

Gene NPL3, Length 1,245 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NPL3	YDR432W	TMN3	P40071	706 aa		13.09	□□□□□ -0.31
NPL3	YDR432W	YNR063W	P53749	607 aa		13.09	□□□□□ -0.31
NPL3	YDR432W	OPT2	Q06593	877 aa		13.09	□□□□□ -0.31
NPL3	YDR432W	OPI10	Q08202	246 aa		13.09	□□□□□ -0.31
NPL3	YDR432W	GEX1	P25596	615 aa		13.08	□□□□□ -0.32
NPL3	YDR432W	YKL050C	P35736	922 aa		13.08	□□□□□ -0.32
NPL3	YDR432W	ADD66	P36040	267 aa		13.08	□□□□□ -0.32
NPL3	YDR432W	EBP2	P36049	427 aa	Known RBP	13.08	□□□□□ -0.32
NPL3	YDR432W	GEX2	P36173	615 aa		13.08	□□□□□ -0.32
NPL3	YDR432W	SRP68	P38687	599 aa	Known RBP	13.08	□□□□□ -0.32
NPL3	YDR432W	STL1	P39932	569 aa		13.08	□□□□□ -0.32
NPL3	YDR432W	KTR7	P40504	517 aa		13.08	□□□□□ -0.32
NPL3	YDR432W	SER33	P40510	469 aa		13.08	□□□□□ -0.32
NPL3	YDR432W	PRM1	P53835	661 aa		13.08	□□□□□ -0.32
NPL3	YDR432W	AQR1	P53943	586 aa		13.08	□□□□□ -0.32
NPL3	YDR432W	ERG5	P54781	538 aa		13.08	□□□□□ -0.32
NPL3	YDR432W	ADE3	P07245	946 aa	Known RBP	13.07	□□□□□ -0.32
NPL3	YDR432W	CHL1	P22516	861 aa	Predicted RBP	13.07	□□□□□ -0.32
NPL3	YDR432W	SPC110	P32380	944 aa		13.07	□□□□□ -0.32
NPL3	YDR432W	EMW1	P42842	904 aa	Known RBP	13.07	□□□□□ -0.32
NPL3	YDR432W	YTP1	P53584	459 aa		13.07	□□□□□ -0.32
NPL3	YDR432W	SYH1	Q02875	849 aa	Known RBP	13.07	□□□□□ -0.32
NPL3	YDR432W	INP2	Q03824	705 aa		13.07	□□□□□ -0.32
NPL3	YDR432W	MTF2	P10849	440 aa		13.06	□□□□□ -0.32
NPL3	YDR432W	GFA1	P14742	717 aa	Known RBP	13.06	□□□□□ -0.32
NPL3	YDR432W	APM3	P38153	483 aa		13.06	□□□□□ -0.32
NPL3	YDR432W	PFS1	P38872	237 aa		13.06	□□□□□ -0.32
NPL3	YDR432W	IML2	P47031	731 aa		13.06	□□□□□ -0.32
NPL3	YDR432W	AMA1	P50082	593 aa		13.06	□□□□□ -0.32
NPL3	YDR432W	YNL247W	P53852	767 aa	Known RBP	13.06	□□□□□ -0.32
NPL3	YDR432W	PIR1	Q03178	341 aa		13.06	□□□□□ -0.32
NPL3	YDR432W	NEW1	Q08972	1196 aa	Known RBP	13.06	□□□□□ -0.32
NPL3	YDR432W	COX3	P00420	269 aa		13.05	□□□□□ -0.32
NPL3	YDR432W	TRX1	P22217	103 aa	Known RBP	13.05	□□□□□ -0.32
NPL3	YDR432W	ADY2	P25613	283 aa		13.05	□□□□□ -0.32
NPL3	YDR432W	ERP2	P39704	215 aa		13.05	□□□□□ -0.32
NPL3	YDR432W	AIM14	P53109	570 aa		13.05	□□□□□ -0.32
NPL3	YDR432W	ORC3	P54790	616 aa		13.05	□□□□□ -0.32
NPL3	YDR432W	CDC55	Q00362	526 aa		13.05	□□□□□ -0.32
NPL3	YDR432W	BET4	Q00618	327 aa		13.05	□□□□□ -0.32
NPL3	YDR432W	INA17	Q02888	182 aa		13.05	□□□□□ -0.32
NPL3	YDR432W	VPS38	Q05919	439 aa		13.05	□□□□□ -0.32
NPL3	YDR432W	SAM4	Q08985	325 aa	Known RBP	13.05	□□□□□ -0.32
NPL3	YDR432W	PEX11	Q12462	236 aa		13.05	□□□□□ -0.32
NPL3	YDR432W	MIH1	P23748	554 aa		13.04	□□□□□ -0.32
NPL3	YDR432W	KAR9	P32526	644 aa		13.04	□□□□□ -0.32
NPL3	YDR432W	LIP5	P32875	414 aa		13.04	□□□□□ -0.32
NPL3	YDR432W	DCW1	P36091	449 aa		13.04	□□□□□ -0.32
NPL3	YDR432W	TIF34	P40217	347 aa	Known RBP	13.04	□□□□□ -0.32
NPL3	YDR432W	RRN7	P40992	514 aa		13.04	□□□□□ -0.32
NPL3	YDR432W	YGL140C	P53120	1219 aa		13.04	□□□□□ -0.32
NPL3	YDR432W	RTK1	Q12100	620 aa	Predicted RBP	13.04	□□□□□ -0.32
NPL3	YDR432W	PDR1	P12383	1068 aa		13.03	□□□□□ -0.32
NPL3	YDR432W	NCL1	P38205	684 aa	Known RBP	13.03	□□□□□ -0.32
NPL3	YDR432W	YMR124W	P39523	943 aa	Known RBP	13.03	□□□□□ -0.32
NPL3	YDR432W	MNN11	P46985	422 aa	Known RBP	13.03	□□□□□ -0.32
NPL3	YDR432W	YJL132W	P47014	750 aa		13.03	□□□□□ -0.32
NPL3	YDR432W	MNN10	P50108	393 aa	Known RBP	13.03	□□□□□ -0.32
NPL3	YDR432W	OPY2	Q06810	360 aa		13.03	□□□□□ -0.32
NPL3	YDR432W	SST2	P11972	698 aa	Known RBP	13.02	□□□□□ -0.33
NPL3	YDR432W	TCB2	P48231	1178 aa		13.02	□□□□□ -0.33
NPL3	YDR432W	YGR021W	P53212	290 aa		13.02	□□□□□ -0.33
NPL3	YDR432W	UTP5	Q04177	643 aa	Known RBP	13.02	□□□□□ -0.33
NPL3	YDR432W	GPM3	Q12326	303 aa		13.02	□□□□□ -0.33
NPL3	YDR432W	IRA1	P18963	3092 aa		13.01	□□□□□ -0.33
NPL3	YDR432W	MRPL8	P22353	238 aa		13.01	□□□□□ -0.33
NPL3	YDR432W	PMI40	P29952	429 aa	Known RBP	13.01	□□□□□ -0.33
NPL3	YDR432W	SLX5	P32828	619 aa	Known RBP	13.01	□□□□□ -0.33
NPL3	YDR432W	YKL151C	P36059	337 aa		13.01	□□□□□ -0.33
NPL3	YDR432W	DLD2	P46681	530 aa	Known RBP	13.01	□□□□□ -0.33
NPL3	YDR432W	YNL040W	P53960	456 aa	Predicted RBP	13.01	□□□□□ -0.33
NPL3	YDR432W	YAT1	P80235	687 aa		13.01	□□□□□ -0.33
NPL3	YDR432W	CTR9	P89105	1077 aa		13.01	□□□□□ -0.33
NPL3	YDR432W	KAP95	Q06142	861 aa	Known RBP	13.01	□□□□□ -0.33
NPL3	YDR432W	RPN8	Q08723	338 aa	Known RBP	13.01	□□□□□ -0.33
NPL3	YDR432W	SET5	P38890	526 aa	Known RBP	13	□□□□□ -0.33
NPL3	YDR432W	YEL028W	P39989	153 aa		13	□□□□□ -0.33
NPL3	YDR432W	SEC9	P40357	651 aa		13	□□□□□ -0.33
NPL3	YDR432W	YMR018W	Q04364	514 aa		13	□□□□□ -0.33
NPL3	YDR432W	IVY1	Q04934	453 aa		13	□□□□□ -0.33
NPL3	YDR432W	YLR001C	Q07895	862 aa		13	□□□□□ -0.33
NPL3	YDR432W	SFI1	Q12369	946 aa		13	□□□□□ -0.33
NPL3	YDR432W	AFI1	Q99222	893 aa		13	□□□□□ -0.33
NPL3	YDR432W	IZH4	Q99393	312 aa		13	□□□□□ -0.33
NPL3	YDR432W	SEC23	P15303	768 aa	Known RBP	12.99	□□□□□ -0.33
NPL3	YDR432W	ERG6	P25087	383 aa	Known RBP	12.99	□□□□□ -0.33
NPL3	YDR432W	RAD57	P25301	460 aa		12.99	□□□□□ -0.33
NPL3	YDR432W	PMC1	P38929	1173 aa	Predicted RBP	12.99	□□□□□ -0.33
NPL3	YDR432W	ASG1	P40467	964 aa		12.99	□□□□□ -0.33
NPL3	YDR432W	DSN1	P40568	576 aa		12.99	□□□□□ -0.33
NPL3	YDR432W	REF2	P42073	533 aa	Predicted RBP	12.99	□□□□□ -0.33
NPL3	YDR432W	COG7	P53195	279 aa		12.99	□□□□□ -0.33
NPL3	YDR432W	ALF1	P53904	254 aa		12.99	□□□□□ -0.33
NPL3	YDR432W	YPL113C	Q02961	396 aa		12.99	□□□□□ -0.33
NPL3	YDR432W	TPO1	Q07824	586 aa		12.99	□□□□□ -0.33
NPL3	YDR432W	NAG1	Q8TGN9	163 aa		12.99	□□□□□ -0.33
NPL3	YDR432W	PAT1	P25644	796 aa	Known RBP	12.98	□□□□□ -0.33
NPL3	YDR432W	PMT1	P33775	817 aa		12.98	□□□□□ -0.33
NPL3	YDR432W	SPC72	P39723	622 aa		12.98	□□□□□ -0.33
NPL3	YDR432W	KHA1	P40309	873 aa		12.98	□□□□□ -0.33

Retrieved 100 of 5,963 RNA–protein pairs in 148.7 ms