RNA–Protein interactions for RNA: YDR351W

SBE2, Transcript of Protein required for bud growth, yeast

Gene SBE2, Length 2,595 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SBE2	YDR351W	TAF4	P50105	388 aa		4.63	□□□□□ -1.67
SBE2	YDR351W	CUL3	P53202	744 aa		4.63	□□□□□ -1.67
SBE2	YDR351W	GPD1	Q00055	391 aa	Known RBP	4.63	□□□□□ -1.67
SBE2	YDR351W	SMA1	Q02651	245 aa		4.63	□□□□□ -1.67
SBE2	YDR351W	FMP40	Q08968	688 aa	Predicted RBP	4.63	□□□□□ -1.67
SBE2	YDR351W	APM4	Q99186	491 aa		4.63	□□□□□ -1.67
SBE2	YDR351W	PHR1	P05066	565 aa	Known RBP RIP-Chip data	4.63	□□□□□ -1.67	not detected
SBE2	YDR351W	NUC1	P08466	329 aa		4.63	□□□□□ -1.67
SBE2	YDR351W	YML002W	P0CF17	737 aa		4.63	□□□□□ -1.67
SBE2	YDR351W	DAP2	P18962	818 aa		4.63	□□□□□ -1.67
SBE2	YDR351W	SRP101	P32916	621 aa		4.63	□□□□□ -1.67
SBE2	YDR351W	TIF3	P34167	436 aa	Known RBP	4.63	□□□□□ -1.67
SBE2	YDR351W	PIN4	P34217	668 aa	Known RBP RIP-Chip data	4.63	□□□□□ -1.67	not detected
SBE2	YDR351W	DCW1	P36091	449 aa		4.63	□□□□□ -1.67
SBE2	YDR351W	APE3	P37302	537 aa	Known RBP	4.63	□□□□□ -1.67
SBE2	YDR351W	IFA38	P38286	347 aa		4.63	□□□□□ -1.67
SBE2	YDR351W	LIN1	P38852	340 aa	Predicted RBP	4.63	□□□□□ -1.67
SBE2	YDR351W	ILV3	P39522	585 aa	Known RBP	4.63	□□□□□ -1.67
SBE2	YDR351W	MCM6	P53091	1017 aa	Known RBP	4.63	□□□□□ -1.67
SBE2	YDR351W	PGA2	P53903	129 aa		4.63	□□□□□ -1.67
SBE2	YDR351W	MAK10	Q02197	733 aa		4.63	□□□□□ -1.67
SBE2	YDR351W	RTT103	Q05543	409 aa		4.63	□□□□□ -1.67
SBE2	YDR351W	BCP1	Q06338	283 aa		4.63	□□□□□ -1.67
SBE2	YDR351W	LDB17	Q12342	491 aa		4.63	□□□□□ -1.67
SBE2	YDR351W	LAM4	P38800	1345 aa		4.63	□□□□□ -1.67
SBE2	YDR351W	YPK2	P18961	677 aa		4.62	□□□□□ -1.67
SBE2	YDR351W	CDC42	P19073	191 aa		4.62	□□□□□ -1.67
SBE2	YDR351W	ADP1	P25371	1049 aa		4.62	□□□□□ -1.67
SBE2	YDR351W	ERG1	P32476	496 aa	Known RBP	4.62	□□□□□ -1.67
SBE2	YDR351W	IXR1	P33417	597 aa		4.62	□□□□□ -1.67
SBE2	YDR351W	TPO5	P36029	618 aa		4.62	□□□□□ -1.67
SBE2	YDR351W	SSZ1	P38788	538 aa	Known RBP	4.62	□□□□□ -1.67
SBE2	YDR351W	YEL025C	P39991	1188 aa		4.62	□□□□□ -1.67
SBE2	YDR351W	SIW14	P53965	281 aa		4.62	□□□□□ -1.67
SBE2	YDR351W	SNO4	Q04902	237 aa		4.62	□□□□□ -1.67
SBE2	YDR351W	FUS2	Q05670	677 aa		4.62	□□□□□ -1.67
SBE2	YDR351W	TUM1	Q08686	304 aa	Known RBP	4.62	□□□□□ -1.67
SBE2	YDR351W	YOR296W	Q08748	1289 aa		4.62	□□□□□ -1.67
SBE2	YDR351W	HSP33	Q08914	237 aa	Known RBP	4.62	□□□□□ -1.67
SBE2	YDR351W	HSP32	Q08992	237 aa		4.62	□□□□□ -1.67
SBE2	YDR351W	DCS2	Q12123	353 aa		4.62	□□□□□ -1.67
SBE2	YDR351W	GPM3	Q12326	303 aa		4.62	□□□□□ -1.67
SBE2	YDR351W	RDS1	P25611	832 aa		4.62	□□□□□ -1.67
SBE2	YDR351W	YBR284W	P38150	797 aa		4.62	□□□□□ -1.67
SBE2	YDR351W	ALG14	P38242	237 aa		4.62	□□□□□ -1.67
SBE2	YDR351W	MUP3	P38734	546 aa		4.62	□□□□□ -1.67
SBE2	YDR351W	LYS9	P38999	446 aa		4.62	□□□□□ -1.67
SBE2	YDR351W	YTA12	P40341	825 aa		4.62	□□□□□ -1.67
SBE2	YDR351W	DAN4	P47179	1161 aa		4.62	□□□□□ -1.67
SBE2	YDR351W	MNT2	P53059	558 aa		4.62	□□□□□ -1.67
SBE2	YDR351W	TAD1	P53065	400 aa		4.62	□□□□□ -1.67
SBE2	YDR351W	ESBP6	P53918	673 aa		4.62	□□□□□ -1.67
SBE2	YDR351W	ISR1	Q06098	443 aa	Known RBP	4.62	□□□□□ -1.67
SBE2	YDR351W	HFI1	Q12060	488 aa		4.62	□□□□□ -1.67
SBE2	YDR351W	YPL066W	Q12194	479 aa		4.62	□□□□□ -1.67
SBE2	YDR351W	RPN5	Q12250	445 aa	Known RBP	4.62	□□□□□ -1.67
SBE2	YDR351W	YDL206W	Q12424	762 aa		4.62	□□□□□ -1.67
SBE2	YDR351W	CFT1	Q06632	1357 aa	Known RBP	4.62	□□□□□ -1.67
SBE2	YDR351W	HXK2	P04807	486 aa	Known RBP	4.61	□□□□□ -1.67
SBE2	YDR351W	HEM13	P11353	328 aa	Known RBP	4.61	□□□□□ -1.67
SBE2	YDR351W	RAP1	P11938	827 aa		4.61	□□□□□ -1.67
SBE2	YDR351W	INO1	P11986	533 aa		4.61	□□□□□ -1.67
SBE2	YDR351W	PRP2	P20095	876 aa	Predicted RBP	4.61	□□□□□ -1.67
SBE2	YDR351W	DAL81	P21657	970 aa		4.61	□□□□□ -1.67
SBE2	YDR351W	PRP22	P24384	1145 aa	Known RBP	4.61	□□□□□ -1.67
SBE2	YDR351W	GPT2	P36148	743 aa		4.61	□□□□□ -1.67
SBE2	YDR351W	ERT1	P38140	529 aa		4.61	□□□□□ -1.67
SBE2	YDR351W	IAH1	P41734	238 aa		4.61	□□□□□ -1.67
SBE2	YDR351W	RGD2	P43556	714 aa		4.61	□□□□□ -1.67
SBE2	YDR351W	BNA6	P43619	295 aa		4.61	□□□□□ -1.67
SBE2	YDR351W	SIP4	P46954	829 aa		4.61	□□□□□ -1.67
SBE2	YDR351W	DUO1	P53168	247 aa	Known RBP	4.61	□□□□□ -1.67
SBE2	YDR351W	RPT6	Q01939	405 aa	Known RBP	4.61	□□□□□ -1.67
SBE2	YDR351W	ABZ2	Q03266	374 aa		4.61	□□□□□ -1.67
SBE2	YDR351W	RSN1	Q03516	953 aa		4.61	□□□□□ -1.67
SBE2	YDR351W	LUC7	Q07508	261 aa	Predicted RBP	4.61	□□□□□ -1.67
SBE2	YDR351W	TGS1	Q12052	315 aa		4.61	□□□□□ -1.67
SBE2	YDR351W	ULA1	Q12059	462 aa		4.61	□□□□□ -1.67
SBE2	YDR351W	GIS3	Q12418	502 aa		4.61	□□□□□ -1.67
SBE2	YDR351W	ISN1	Q99312	450 aa		4.61	□□□□□ -1.67
SBE2	YDR351W	YML133C	Q03099	1374 aa		4.61	□□□□□ -1.67
SBE2	YDR351W	YLL066C	Q99208	1374 aa		4.61	□□□□□ -1.67
SBE2	YDR351W	SWI5	P08153	709 aa		4.61	□□□□□ -1.67
SBE2	YDR351W	RPP1B	P10622	106 aa	Known RBP	4.61	□□□□□ -1.67
SBE2	YDR351W	ARO3	P14843	370 aa	Known RBP	4.61	□□□□□ -1.67
SBE2	YDR351W	HXT4	P32467	576 aa		4.61	□□□□□ -1.67
SBE2	YDR351W	HOG1	P32485	435 aa		4.61	□□□□□ -1.67
SBE2	YDR351W	COT1	P32798	439 aa		4.61	□□□□□ -1.67
SBE2	YDR351W	NUF2	P33895	451 aa		4.61	□□□□□ -1.67
SBE2	YDR351W	MRX6	P48564	524 aa		4.61	□□□□□ -1.67
SBE2	YDR351W	GIS4	Q04233	774 aa		4.61	□□□□□ -1.67
SBE2	YDR351W	TCO89	Q08921	799 aa		4.61	□□□□□ -1.67
SBE2	YDR351W	VIK1	Q12045	647 aa		4.61	□□□□□ -1.67
SBE2	YDR351W	FRD1	P32614	470 aa	Known RBP	4.6	□□□□□ -1.67
SBE2	YDR351W	IRS4	P36115	615 aa	Known RBP	4.6	□□□□□ -1.67
SBE2	YDR351W	PTC4	P38089	393 aa		4.6	□□□□□ -1.67
SBE2	YDR351W	ALG3	P38179	458 aa		4.6	□□□□□ -1.67
SBE2	YDR351W	OPY1	P38271	328 aa		4.6	□□□□□ -1.67
SBE2	YDR351W	APD1	P38281	316 aa		4.6	□□□□□ -1.67
SBE2	YDR351W	TCD1	P38756	429 aa		4.6	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 57.3 ms