RNA–Protein interactions for RNA: YDR030C

RAD28, Transcript of Protein involved in DNA repair, yeast

Gene RAD28, Length 1,521 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RAD28	YDR030C	SEY1	Q99287	776 aa		4.86	□□□□□ -1.63
RAD28	YDR030C	YLR278C	Q05854	1341 aa		4.85	□□□□□ -1.63
RAD28	YDR030C	RPB2	P08518	1224 aa	Known RBP	4.85	□□□□□ -1.63
RAD28	YDR030C	ADH4	P10127	382 aa		4.85	□□□□□ -1.63
RAD28	YDR030C	DAL2	P25335	343 aa		4.85	□□□□□ -1.63
RAD28	YDR030C	ILV6	P25605	309 aa	Known RBP	4.85	□□□□□ -1.63
RAD28	YDR030C	MLS1	P30952	554 aa		4.85	□□□□□ -1.63
RAD28	YDR030C	PLC1	P32383	869 aa		4.85	□□□□□ -1.63
RAD28	YDR030C	CDC11	P32458	415 aa		4.85	□□□□□ -1.63
RAD28	YDR030C	YME1	P32795	747 aa		4.85	□□□□□ -1.63
RAD28	YDR030C	RRP14	P36080	434 aa	Known RBP	4.85	□□□□□ -1.63
RAD28	YDR030C	YSW1	P38280	609 aa		4.85	□□□□□ -1.63
RAD28	YDR030C	MED8	P38304	223 aa		4.85	□□□□□ -1.63
RAD28	YDR030C	YHR020W	P38708	688 aa	Known RBP	4.85	□□□□□ -1.63
RAD28	YDR030C	END3	P39013	349 aa		4.85	□□□□□ -1.63
RAD28	YDR030C	NPP2	P39997	493 aa		4.85	□□□□□ -1.63
RAD28	YDR030C	INA22	P40576	216 aa		4.85	□□□□□ -1.63
RAD28	YDR030C	ATG36	P46983	293 aa		4.85	□□□□□ -1.63
RAD28	YDR030C	HSH155	P49955	971 aa	Known RBP	4.85	□□□□□ -1.63
RAD28	YDR030C	RTT102	P53330	157 aa		4.85	□□□□□ -1.63
RAD28	YDR030C	CPR6	P53691	371 aa	Known RBP	4.85	□□□□□ -1.63
RAD28	YDR030C	RPL22B	P56628	122 aa	Known RBP	4.85	□□□□□ -1.63
RAD28	YDR030C	YDR278C	Q05612	105 aa		4.85	□□□□□ -1.63
RAD28	YDR030C	DUS4	Q06063	367 aa		4.85	□□□□□ -1.63
RAD28	YDR030C	BRE4	Q07660	1125 aa		4.85	□□□□□ -1.63
RAD28	YDR030C	FMP25	Q08023	583 aa		4.85	□□□□□ -1.63
RAD28	YDR030C	THS1	P04801	734 aa	Known RBP	4.84	□□□□□ -1.63
RAD28	YDR030C	VMA2	P16140	517 aa	Known RBP	4.84	□□□□□ -1.63
RAD28	YDR030C	SPO16	P17122	198 aa		4.84	□□□□□ -1.63
RAD28	YDR030C	PRE10	P21242	288 aa	Known RBP RIP-Chip data	4.84	□□□□□ -1.63	not detected
RAD28	YDR030C	TKL1	P23254	680 aa	Known RBP	4.84	□□□□□ -1.63
RAD28	YDR030C	CDC10	P25342	322 aa	Known RBP	4.84	□□□□□ -1.63
RAD28	YDR030C	CAP1	P28495	268 aa	Known RBP	4.84	□□□□□ -1.63
RAD28	YDR030C	EUG1	P32474	517 aa		4.84	□□□□□ -1.63
RAD28	YDR030C	CBF2	P32504	956 aa		4.84	□□□□□ -1.63
RAD28	YDR030C	SWI3	P32591	825 aa		4.84	□□□□□ -1.63
RAD28	YDR030C	PPG1	P32838	368 aa		4.84	□□□□□ -1.63
RAD28	YDR030C	YBL055C	P34220	418 aa	Predicted RBP	4.84	□□□□□ -1.63
RAD28	YDR030C	RPC37	P36121	282 aa		4.84	□□□□□ -1.63
RAD28	YDR030C	TVP38	P36164	337 aa		4.84	□□□□□ -1.63
RAD28	YDR030C	MRX3	P38172	270 aa		4.84	□□□□□ -1.63
RAD28	YDR030C	QNS1	P38795	714 aa	Known RBP	4.84	□□□□□ -1.63
RAD28	YDR030C	SMX2	P40204	77 aa	Known RBP	4.84	□□□□□ -1.63
RAD28	YDR030C	OYE3	P41816	400 aa	Predicted RBP	4.84	□□□□□ -1.63
RAD28	YDR030C	CPR7	P47103	393 aa		4.84	□□□□□ -1.63
RAD28	YDR030C	URB2	P47108	1174 aa		4.84	□□□□□ -1.63
RAD28	YDR030C	RPA49	Q01080	415 aa	Predicted RBP	4.84	□□□□□ -1.63
RAD28	YDR030C	CEF1	Q03654	590 aa	Predicted RBP	4.84	□□□□□ -1.63
RAD28	YDR030C	USA1	Q03714	838 aa		4.84	□□□□□ -1.63
RAD28	YDR030C	YDR222W	Q04925	415 aa		4.84	□□□□□ -1.63
RAD28	YDR030C	RSA3	Q05942	220 aa	Known RBP	4.84	□□□□□ -1.63
RAD28	YDR030C	YLR257W	Q06146	321 aa	Known RBP	4.84	□□□□□ -1.63
RAD28	YDR030C	PIG1	Q06216	648 aa		4.84	□□□□□ -1.63
RAD28	YDR030C	IES4	Q08561	116 aa		4.84	□□□□□ -1.63
RAD28	YDR030C	FLC1	Q08967	793 aa		4.84	□□□□□ -1.63
RAD28	YDR030C	YVC1	Q12324	675 aa		4.84	□□□□□ -1.63
RAD28	YDR030C	JIP3	O13555	125 aa		4.83	□□□□□ -1.64
RAD28	YDR030C	RPS3	P05750	240 aa	Known RBP	4.83	□□□□□ -1.64
RAD28	YDR030C	GCD1	P09032	578 aa	Predicted RBP	4.83	□□□□□ -1.64
RAD28	YDR030C	POL3	P15436	1097 aa		4.83	□□□□□ -1.64
RAD28	YDR030C	PRP16	P15938	1071 aa	Predicted RBP	4.83	□□□□□ -1.64
RAD28	YDR030C	KAR3	P17119	729 aa		4.83	□□□□□ -1.64
RAD28	YDR030C	YCR051W	P25631	222 aa		4.83	□□□□□ -1.64
RAD28	YDR030C	LIP5	P32875	414 aa		4.83	□□□□□ -1.64
RAD28	YDR030C	LOS1	P33418	1100 aa	Predicted RBP	4.83	□□□□□ -1.64
RAD28	YDR030C	CSG2	P35206	410 aa		4.83	□□□□□ -1.64
RAD28	YDR030C	REG2	P38232	338 aa		4.83	□□□□□ -1.64
RAD28	YDR030C	MSG5	P38590	489 aa		4.83	□□□□□ -1.64
RAD28	YDR030C	GPB2	P39717	880 aa		4.83	□□□□□ -1.64
RAD28	YDR030C	MRX1	P40050	688 aa		4.83	□□□□□ -1.64
RAD28	YDR030C	DSN1	P40568	576 aa		4.83	□□□□□ -1.64
RAD28	YDR030C	PFD1	P46988	109 aa		4.83	□□□□□ -1.64
RAD28	YDR030C	SHE10	P53075	577 aa		4.83	□□□□□ -1.64
RAD28	YDR030C	ERV41	Q04651	352 aa		4.83	□□□□□ -1.64
RAD28	YDR030C	COQ9	Q05779	260 aa		4.83	□□□□□ -1.64
RAD28	YDR030C	IWR1	Q07532	353 aa	Predicted RBP	4.83	□□□□□ -1.64
RAD28	YDR030C	PUS7	Q08647	676 aa	Known RBP	4.83	□□□□□ -1.64
RAD28	YDR030C	ACM1	Q08981	209 aa		4.83	□□□□□ -1.64
RAD28	YDR030C	GNT1	Q12096	491 aa		4.83	□□□□□ -1.64
RAD28	YDR030C	OSW2	Q12202	724 aa		4.83	□□□□□ -1.64
RAD28	YDR030C	ERP3	Q12403	225 aa		4.83	□□□□□ -1.64
RAD28	YDR030C	PEP5	P12868	1029 aa		4.82	□□□□□ -1.64
RAD28	YDR030C	NAT1	P12945	854 aa	Known RBP	4.82	□□□□□ -1.64
RAD28	YDR030C	PMS1	P14242	873 aa		4.82	□□□□□ -1.64
RAD28	YDR030C	CDC42	P19073	191 aa		4.82	□□□□□ -1.64
RAD28	YDR030C	IME1	P21190	360 aa		4.82	□□□□□ -1.64
RAD28	YDR030C	VHC1	P38329	1120 aa		4.82	□□□□□ -1.64
RAD28	YDR030C	MBP1	P39678	833 aa		4.82	□□□□□ -1.64
RAD28	YDR030C	YEL025C	P39991	1188 aa		4.82	□□□□□ -1.64
RAD28	YDR030C	EAF5	P39995	279 aa		4.82	□□□□□ -1.64
RAD28	YDR030C	FTR1	P40088	404 aa		4.82	□□□□□ -1.64
RAD28	YDR030C	ASG1	P40467	964 aa		4.82	□□□□□ -1.64
RAD28	YDR030C	PHO86	P46956	311 aa		4.82	□□□□□ -1.64
RAD28	YDR030C	ASN1	P49089	572 aa	Known RBP	4.82	□□□□□ -1.64
RAD28	YDR030C	ORC5	P50874	479 aa		4.82	□□□□□ -1.64
RAD28	YDR030C	DRN1	P53255	507 aa	Known RBP	4.82	□□□□□ -1.64
RAD28	YDR030C	YGR125W	P53273	1036 aa		4.82	□□□□□ -1.64
RAD28	YDR030C	ALG12	P53730	551 aa		4.82	□□□□□ -1.64
RAD28	YDR030C	TPP1	Q03796	238 aa		4.82	□□□□□ -1.64
RAD28	YDR030C	PPM1	Q04081	328 aa		4.82	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 67.5 ms