RNA–Protein interactions for RNA: YDL154W

MSH5, Transcript of Protein of the MutS family, yeastyeast

Gene MSH5, Length 2,706 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH5YDL154W QRI7P43122 407 aa2.01□□□□□ -2.09
MSH5YDL154W UBC11P52492 156 aa2.01□□□□□ -2.09
MSH5YDL154W SSL2Q00578 843 aa2.01□□□□□ -2.09
MSH5YDL154W TIM44Q01852 431 aa2.01□□□□□ -2.09
MSH5YDL154W MFM1Q02783 413 aa2.01□□□□□ -2.09
MSH5YDL154W BLS1Q06071 122 aa2.01□□□□□ -2.09
MSH5YDL154W YDL086WQ07505 273 aa2.01□□□□□ -2.09
MSH5YDL154W TUB2P02557 457 aaKnown RBP2□□□□□ -2.09
MSH5YDL154W MIS1P09440 975 aaKnown RBP2□□□□□ -2.09
MSH5YDL154W IME1P21190 360 aa2□□□□□ -2.09
MSH5YDL154W CWH43P25618 953 aa2□□□□□ -2.09
MSH5YDL154W PMI40P29952 429 aaKnown RBP2□□□□□ -2.09
MSH5YDL154W PRE4P30657 266 aa2□□□□□ -2.09
MSH5YDL154W RAD16P31244 790 aa2□□□□□ -2.09
MSH5YDL154W TRM2P33753 639 aa2□□□□□ -2.09
MSH5YDL154W THI80P35202 319 aa2□□□□□ -2.09
MSH5YDL154W PHO11P35842 467 aa2□□□□□ -2.09
MSH5YDL154W PPS1P38148 807 aa2□□□□□ -2.09
MSH5YDL154W PHO12P38693 467 aa2□□□□□ -2.09
MSH5YDL154W FMP52P40008 231 aa2□□□□□ -2.09
MSH5YDL154W ARG2P40360 574 aa2□□□□□ -2.09
MSH5YDL154W HOS4P40480 1083 aa2□□□□□ -2.09
MSH5YDL154W BAP3P41815 604 aa2□□□□□ -2.09
MSH5YDL154W MPS3P47069 682 aa2□□□□□ -2.09
MSH5YDL154W TEL2P53038 688 aa2□□□□□ -2.09
MSH5YDL154W ERG5P54781 538 aa2□□□□□ -2.09
MSH5YDL154W HMO1Q03973 246 aaKnown RBP2□□□□□ -2.09
MSH5YDL154W YMR018WQ04364 514 aa2□□□□□ -2.09
MSH5YDL154W PSR2Q07949 397 aa2□□□□□ -2.09
MSH5YDL154W YLR040CQ07988 224 aa2□□□□□ -2.09
MSH5YDL154W USV1Q12132 391 aa2□□□□□ -2.09
MSH5YDL154W TRM13Q12383 476 aa2□□□□□ -2.09
MSH5YDL154W PHO5P00635 467 aa2□□□□□ -2.09
MSH5YDL154W HOP1P20050 605 aa2□□□□□ -2.09
MSH5YDL154W BET2P20133 325 aa2□□□□□ -2.09
MSH5YDL154W FUB1P25659 250 aa2□□□□□ -2.09
MSH5YDL154W GCD7P32502 381 aaPredicted RBP2□□□□□ -2.09
MSH5YDL154W RMA1P36001 430 aaKnown RBP2□□□□□ -2.09
MSH5YDL154W APL3P38065 1025 aa2□□□□□ -2.09
MSH5YDL154W YHL041WP38730 149 aa2□□□□□ -2.09
MSH5YDL154W GIP4P39732 760 aa2□□□□□ -2.09
MSH5YDL154W YEL025CP39991 1188 aa2□□□□□ -2.09
MSH5YDL154W SAP185P40856 1058 aa2□□□□□ -2.09
MSH5YDL154W IDS2P46958 469 aa2□□□□□ -2.09
MSH5YDL154W MAD3P47074 515 aa2□□□□□ -2.09
MSH5YDL154W MNT2P53059 558 aa2□□□□□ -2.09
MSH5YDL154W FDC1Q03034 503 aa2□□□□□ -2.09
MSH5YDL154W ARA2Q04212 335 aa2□□□□□ -2.09
MSH5YDL154W YSH1Q06224 779 aaPredicted RBP2□□□□□ -2.09
MSH5YDL154W HBT1Q07653 1046 aaKnown RBP2□□□□□ -2.09
MSH5YDL154W YOL073CQ08232 322 aa2□□□□□ -2.09
MSH5YDL154W URA3P03962 267 aa1.99□□□□□ -2.09
MSH5YDL154W ADH4P10127 382 aa1.99□□□□□ -2.09
MSH5YDL154W PFK2P16862 959 aaKnown RBP RIP-Chip data1.99□□□□□ -2.09not detected
MSH5YDL154W CDC43P18898 376 aa1.99□□□□□ -2.09
MSH5YDL154W SWC3P31376 625 aa1.99□□□□□ -2.09
MSH5YDL154W DEF1P35732 738 aaKnown RBP1.99□□□□□ -2.09
MSH5YDL154W DHR2P36009 735 aaPredicted RBP1.99□□□□□ -2.09
MSH5YDL154W YJL193WP39542 402 aa1.99□□□□□ -2.09
MSH5YDL154W SWD1P39706 426 aa1.99□□□□□ -2.09
MSH5YDL154W FTR1P40088 404 aa1.99□□□□□ -2.09
MSH5YDL154W THI6P41835 540 aa1.99□□□□□ -2.09
MSH5YDL154W YGR021WP53212 290 aa1.99□□□□□ -2.09
MSH5YDL154W TIM50Q02776 476 aa1.99□□□□□ -2.09
MSH5YDL154W VPS72Q03388 795 aa1.99□□□□□ -2.09
MSH5YDL154W YPL216WQ08964 1102 aa1.99□□□□□ -2.09
MSH5YDL154W DBP10Q12389 995 aaKnown RBP1.99□□□□□ -2.09
MSH5YDL154W RPS7AP26786 190 aaKnown RBP1.99□□□□□ -2.09
MSH5YDL154W DBF20P32328 564 aa1.99□□□□□ -2.09
MSH5YDL154W EHT1P38295 451 aa1.99□□□□□ -2.09
MSH5YDL154W CRG1P38892 291 aaRIP-Chip data1.99□□□□□ -2.09 RIP-Chip
MSH5YDL154W UME6P39001 836 aa1.99□□□□□ -2.09
MSH5YDL154W ACA1P39970 489 aa1.99□□□□□ -2.09
MSH5YDL154W VFA1P40080 203 aa1.99□□□□□ -2.09
MSH5YDL154W PEF1P53238 335 aa1.99□□□□□ -2.09
MSH5YDL154W CEG1Q01159 459 aaPredicted RBP1.99□□□□□ -2.09
MSH5YDL154W HLR1Q04429 423 aa1.99□□□□□ -2.09
MSH5YDL154W TRI1Q05024 226 aa1.99□□□□□ -2.09
MSH5YDL154W HOF1Q05080 669 aa1.99□□□□□ -2.09
MSH5YDL154W RTK1Q12100 620 aaPredicted RBP1.99□□□□□ -2.09
MSH5YDL154W YLR278CQ05854 1341 aa1.99□□□□□ -2.09
MSH5YDL154W PIF1P07271 859 aa1.98□□□□□ -2.09
MSH5YDL154W NUC1P08466 329 aa1.98□□□□□ -2.09
MSH5YDL154W MSM1P22438 575 aa1.98□□□□□ -2.09
MSH5YDL154W DSS4P32601 143 aa1.98□□□□□ -2.09
MSH5YDL154W RPT3P33298 428 aaKnown RBP1.98□□□□□ -2.09
MSH5YDL154W ELF1P36053 145 aa1.98□□□□□ -2.09
MSH5YDL154W YHL017WP38745 532 aa1.98□□□□□ -2.09
MSH5YDL154W HRB1P38922 454 aaKnown RBP RIP-Chip data1.98□□□□□ -2.09not detected
MSH5YDL154W PSF2P40359 213 aa1.98□□□□□ -2.09
MSH5YDL154W NDC80P40460 691 aa1.98□□□□□ -2.09
MSH5YDL154W CAB2P40506 365 aa1.98□□□□□ -2.09
MSH5YDL154W MSE1P48525 536 aa1.98□□□□□ -2.09
MSH5YDL154W YGR151CP53287 111 aa1.98□□□□□ -2.09
MSH5YDL154W SPC98P53540 846 aa1.98□□□□□ -2.09
MSH5YDL154W ATG21Q02887 496 aa1.98□□□□□ -2.09
MSH5YDL154W VPS64Q03944 604 aa1.98□□□□□ -2.09
MSH5YDL154W BUD21Q08492 214 aaPredicted RBP1.98□□□□□ -2.09
MSH5YDL154W FAB1P34756 2278 aa1.98□□□□□ -2.09
MSH5YDL154W POL3P15436 1097 aa1.98□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 62.1 ms