RNA–Protein interactions for RNA: YDL020C

RPN4, Transcript of Transcription factor that stimulates expression of proteasome genes, yeastyeast

Gene RPN4, Length 1,596 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN4YDL020C PUG1P40100 303 aa4.54□□□□□ -1.68
RPN4YDL020C PMT6P42934 759 aa4.54□□□□□ -1.68
RPN4YDL020C IDS2P46958 469 aa4.54□□□□□ -1.68
RPN4YDL020C YIP4P53093 235 aa4.54□□□□□ -1.68
RPN4YDL020C YPL216WQ08964 1102 aa4.54□□□□□ -1.68
RPN4YDL020C TAF3Q12297 353 aa4.54□□□□□ -1.68
RPN4YDL020C ADE3P07245 946 aaKnown RBP4.53□□□□□ -1.68
RPN4YDL020C BET2P20133 325 aa4.53□□□□□ -1.68
RPN4YDL020C KIN3P22209 435 aa4.53□□□□□ -1.68
RPN4YDL020C SWI4P25302 1093 aaKnown RBP4.53□□□□□ -1.68
RPN4YDL020C CNE1P27825 502 aa4.53□□□□□ -1.68
RPN4YDL020C PRE2P30656 287 aaKnown RBP4.53□□□□□ -1.68
RPN4YDL020C CAB2P40506 365 aa4.53□□□□□ -1.68
RPN4YDL020C GND2P53319 492 aa4.53□□□□□ -1.68
RPN4YDL020C BUD17P53727 317 aa4.53□□□□□ -1.68
RPN4YDL020C ARC35P53731 342 aaKnown RBP4.53□□□□□ -1.68
RPN4YDL020C NGL2Q03264 515 aaKnown RBP4.53□□□□□ -1.68
RPN4YDL020C USA1Q03714 838 aa4.53□□□□□ -1.68
RPN4YDL020C ARA2Q04212 335 aa4.53□□□□□ -1.68
RPN4YDL020C TMN2Q04562 672 aa4.53□□□□□ -1.68
RPN4YDL020C NCP1P16603 691 aaKnown RBP4.53□□□□□ -1.69
RPN4YDL020C CLB4P24871 460 aa4.53□□□□□ -1.69
RPN4YDL020C YBR138CP38277 524 aa4.53□□□□□ -1.69
RPN4YDL020C RPS15Q01855 142 aaKnown RBP4.53□□□□□ -1.69
RPN4YDL020C YDR179W-AQ03983 463 aa4.53□□□□□ -1.69
RPN4YDL020C ICL2Q12031 575 aa4.53□□□□□ -1.69
RPN4YDL020C CDC43P18898 376 aa4.52□□□□□ -1.69
RPN4YDL020C YCL049CP25577 312 aa4.52□□□□□ -1.69
RPN4YDL020C CCL1P37366 393 aa4.52□□□□□ -1.69
RPN4YDL020C FAF1P40546 346 aaPredicted RBP4.52□□□□□ -1.69
RPN4YDL020C GTR1Q00582 310 aa4.52□□□□□ -1.69
RPN4YDL020C MRPL13Q02204 264 aa4.52□□□□□ -1.69
RPN4YDL020C AIM6Q07716 390 aa4.52□□□□□ -1.69
RPN4YDL020C MRH1Q12117 320 aaPredicted RBP4.52□□□□□ -1.69
RPN4YDL020C NUC1P08466 329 aa4.51□□□□□ -1.69
RPN4YDL020C GFA1P14742 717 aaKnown RBP4.51□□□□□ -1.69
RPN4YDL020C DMC1P25453 334 aa4.51□□□□□ -1.69
RPN4YDL020C BEM3P32873 1128 aa4.51□□□□□ -1.69
RPN4YDL020C LOT5P34234 306 aa4.51□□□□□ -1.69
RPN4YDL020C MTH1P35198 433 aa4.51□□□□□ -1.69
RPN4YDL020C SDH8P38345 138 aa4.51□□□□□ -1.69
RPN4YDL020C PIH1P38768 344 aa4.51□□□□□ -1.69
RPN4YDL020C PSF2P40359 213 aa4.51□□□□□ -1.69
RPN4YDL020C SUB1P54000 292 aaKnown RBP4.51□□□□□ -1.69
RPN4YDL020C ATG21Q02887 496 aa4.51□□□□□ -1.69
RPN4YDL020C YML131WQ03102 365 aa4.51□□□□□ -1.69
RPN4YDL020C TRS130Q03660 1102 aa4.51□□□□□ -1.69
RPN4YDL020C TGS1Q12052 315 aa4.51□□□□□ -1.69
RPN4YDL020C MDM20Q12387 796 aaKnown RBP4.51□□□□□ -1.69
RPN4YDL020C SSM4P40318 1319 aa4.5□□□□□ -1.69
RPN4YDL020C YMC2P38087 329 aa4.5□□□□□ -1.69
RPN4YDL020C PSY4P38193 441 aa4.5□□□□□ -1.69
RPN4YDL020C MIT1P40002 666 aa4.5□□□□□ -1.69
RPN4YDL020C ARB1P40024 610 aaKnown RBP4.5□□□□□ -1.69
RPN4YDL020C SMK1P41808 388 aa4.5□□□□□ -1.69
RPN4YDL020C IML2P47031 731 aa4.5□□□□□ -1.69
RPN4YDL020C IMA1P53051 589 aa4.5□□□□□ -1.69
RPN4YDL020C ESF2P53743 316 aaKnown RBP4.5□□□□□ -1.69
RPN4YDL020C BUD21Q08492 214 aaPredicted RBP4.5□□□□□ -1.69
RPN4YDL020C MTF2P10849 440 aa4.49□□□□□ -1.69
RPN4YDL020C YCR061WP25639 631 aa4.49□□□□□ -1.69
RPN4YDL020C ARP2P32381 391 aaKnown RBP4.49□□□□□ -1.69
RPN4YDL020C YDL073WQ07454 984 aa4.49□□□□□ -1.69
RPN4YDL020C BIK1P11709 440 aa4.48□□□□□ -1.69
RPN4YDL020C YPK1P12688 680 aaKnown RBP4.48□□□□□ -1.69
RPN4YDL020C CDC5P32562 705 aa4.48□□□□□ -1.69
RPN4YDL020C SWE1P32944 819 aa4.48□□□□□ -1.69
RPN4YDL020C XRS2P33301 854 aa4.48□□□□□ -1.69
RPN4YDL020C YPT10P38146 199 aa4.48□□□□□ -1.69
RPN4YDL020C FSH1P38777 243 aaKnown RBP4.48□□□□□ -1.69
RPN4YDL020C SAP4P53036 818 aa4.48□□□□□ -1.69
RPN4YDL020C CRF1Q04930 467 aa4.48□□□□□ -1.69
RPN4YDL020C UBC1P21734 215 aaKnown RBP4.48□□□□□ -1.69
RPN4YDL020C SSH4P32343 579 aa4.48□□□□□ -1.69
RPN4YDL020C MRPL36P36531 177 aa4.48□□□□□ -1.69
RPN4YDL020C NPR3P38742 1146 aa4.48□□□□□ -1.69
RPN4YDL020C VPS73P53142 486 aaKnown RBP4.48□□□□□ -1.69
RPN4YDL020C YPL108WQ02872 168 aaPredicted RBP4.48□□□□□ -1.69
RPN4YDL020C IRC10Q08118 586 aa4.48□□□□□ -1.69
RPN4YDL020C ZPS1Q12512 249 aa4.48□□□□□ -1.69
RPN4YDL020C TPK2P06245 380 aa4.47□□□□□ -1.69
RPN4YDL020C MUP3P38734 546 aa4.47□□□□□ -1.69
RPN4YDL020C BST1P43571 1029 aa4.47□□□□□ -1.69
RPN4YDL020C COQ6P53318 479 aa4.47□□□□□ -1.69
RPN4YDL020C SVL3Q03088 825 aaKnown RBP4.47□□□□□ -1.69
RPN4YDL020C YDL121CQ07541 149 aa4.47□□□□□ -1.69
RPN4YDL020C SSP2Q08646 371 aa4.47□□□□□ -1.69
RPN4YDL020C SUL2Q12325 893 aa4.47□□□□□ -1.69
RPN4YDL020C AAC1P04710 309 aa4.46□□□□□ -1.7
RPN4YDL020C PET122P10355 254 aa4.46□□□□□ -1.7
RPN4YDL020C WHI2P12611 486 aa4.46□□□□□ -1.7
RPN4YDL020C STE12P13574 688 aa4.46□□□□□ -1.7
RPN4YDL020C EMP70P32802 667 aa4.46□□□□□ -1.7
RPN4YDL020C IFA38P38286 347 aa4.46□□□□□ -1.7
RPN4YDL020C ARO9P38840 513 aaPredicted RBP4.46□□□□□ -1.7
RPN4YDL020C LNP1P38878 278 aa4.46□□□□□ -1.7
RPN4YDL020C ASN1P49089 572 aaKnown RBP4.46□□□□□ -1.7
RPN4YDL020C MRN1Q08925 612 aaKnown RBP RIP-Chip data4.46□□□□□ -1.7not detected
RPN4YDL020C MSL5Q12186 476 aaKnown RBP RIP-Chip data4.46□□□□□ -1.7not detected
RPN4YDL020C CPA2P03965 1118 aaKnown RBP4.45□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 133.3 ms