RNA–Protein interactions for RNA: YBR160W

CDC28, Transcript of Cyclin-dependent kinase (CDK) catalytic subunit, yeastyeast

Gene CDC28, Length 897 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC28YBR160W RKM4Q12504 494 aa5.15□□□□□ -1.59
CDC28YBR160W YLR462WO13556 202 aa5.14□□□□□ -1.59
CDC28YBR160W POL3P15436 1097 aa5.14□□□□□ -1.59
CDC28YBR160W DBP2P24783 546 aaKnown RBP5.14□□□□□ -1.59
CDC28YBR160W LCB1P25045 558 aaKnown RBP5.14□□□□□ -1.59
CDC28YBR160W SEC21P32074 935 aaKnown RBP5.14□□□□□ -1.59
CDC28YBR160W SIN4P32259 974 aa5.14□□□□□ -1.59
CDC28YBR160W MOT2P34909 587 aaKnown RBP5.14□□□□□ -1.59
CDC28YBR160W SET3P36124 751 aa5.14□□□□□ -1.59
CDC28YBR160W YBR032WP38223 100 aa5.14□□□□□ -1.59
CDC28YBR160W HSM3P38348 480 aa5.14□□□□□ -1.59
CDC28YBR160W YHR020WP38708 688 aaKnown RBP5.14□□□□□ -1.59
CDC28YBR160W YHL049CP38722 271 aa5.14□□□□□ -1.59
CDC28YBR160W BEM4P39011 633 aa5.14□□□□□ -1.59
CDC28YBR160W YEL075CP39972 122 aa5.14□□□□□ -1.59
CDC28YBR160W LCP5P40079 357 aaPredicted RBP5.14□□□□□ -1.59
CDC28YBR160W YER189WP40104 122 aa5.14□□□□□ -1.59
CDC28YBR160W NIT1P40447 199 aa5.14□□□□□ -1.59
CDC28YBR160W YFL064CP43540 174 aa5.14□□□□□ -1.59
CDC28YBR160W CPR6P53691 371 aaKnown RBP5.14□□□□□ -1.59
CDC28YBR160W YNL040WP53960 456 aaPredicted RBP5.14□□□□□ -1.59
CDC28YBR160W ERV41Q04651 352 aa5.14□□□□□ -1.59
CDC28YBR160W FUS2Q05670 677 aa5.14□□□□□ -1.59
CDC28YBR160W SMD2Q06217 110 aaKnown RBP5.14□□□□□ -1.59
CDC28YBR160W MED1Q12321 566 aa5.14□□□□□ -1.59
CDC28YBR160W OCA6Q12454 224 aa5.14□□□□□ -1.59
CDC28YBR160W YBL111CQ3E7Y5 667 aa5.14□□□□□ -1.59
CDC28YBR160W ILV2P07342 687 aaKnown RBP5.13□□□□□ -1.59
CDC28YBR160W SPS1P08458 490 aa5.13□□□□□ -1.59
CDC28YBR160W RPL11AP0C0W9 174 aaKnown RBP5.13□□□□□ -1.59
CDC28YBR160W PWP1P21304 576 aaKnown RBP5.13□□□□□ -1.59
CDC28YBR160W STE5P32917 917 aa5.13□□□□□ -1.59
CDC28YBR160W SLA2P33338 968 aa5.13□□□□□ -1.59
CDC28YBR160W TFC4P33339 1025 aa5.13□□□□□ -1.59
CDC28YBR160W PIN4P34217 668 aaKnown RBP RIP-Chip data5.13□□□□□ -1.59not detected
CDC28YBR160W YBL055CP34220 418 aaPredicted RBP5.13□□□□□ -1.59
CDC28YBR160W TIF5P38431 405 aaKnown RBP5.13□□□□□ -1.59
CDC28YBR160W SPC72P39723 622 aa5.13□□□□□ -1.59
CDC28YBR160W COS5P47187 383 aa5.13□□□□□ -1.59
CDC28YBR160W VID30P53076 958 aa5.13□□□□□ -1.59
CDC28YBR160W IRC4Q03036 179 aa5.13□□□□□ -1.59
CDC28YBR160W BUL2Q03758 920 aaKnown RBP5.13□□□□□ -1.59
CDC28YBR160W HFD1Q04458 532 aa5.13□□□□□ -1.59
CDC28YBR160W YLR297WQ05899 129 aa5.13□□□□□ -1.59
CDC28YBR160W RPL11BQ3E757 174 aaPredicted RBP5.13□□□□□ -1.59
CDC28YBR160W HKR1P41809 1802 aa5.12□□□□□ -1.59
CDC28YBR160W SNF1P06782 633 aaKnown RBP5.12□□□□□ -1.59
CDC28YBR160W YML002WP0CF17 737 aa5.12□□□□□ -1.59
CDC28YBR160W CLN3P13365 580 aa5.12□□□□□ -1.59
CDC28YBR160W SNA3P14359 133 aa5.12□□□□□ -1.59
CDC28YBR160W GAS1P22146 559 aaKnown RBP5.12□□□□□ -1.59
CDC28YBR160W RNQ1P25367 405 aa5.12□□□□□ -1.59
CDC28YBR160W TRM2P33753 639 aa5.12□□□□□ -1.59
CDC28YBR160W YKL107WP34251 309 aa5.12□□□□□ -1.59
CDC28YBR160W PPS1P38148 807 aa5.12□□□□□ -1.59
CDC28YBR160W HIS2P38635 335 aa5.12□□□□□ -1.59
CDC28YBR160W ETP1P38748 585 aaKnown RBP5.12□□□□□ -1.59
CDC28YBR160W GAA1P39012 614 aa5.12□□□□□ -1.59
CDC28YBR160W END3P39013 349 aa5.12□□□□□ -1.59
CDC28YBR160W MXR1P40029 184 aa5.12□□□□□ -1.59
CDC28YBR160W NBP1P52919 319 aaPredicted RBP5.12□□□□□ -1.59
CDC28YBR160W TAF6P53040 516 aa5.12□□□□□ -1.59
CDC28YBR160W RPT4P53549 437 aaKnown RBP5.12□□□□□ -1.59
CDC28YBR160W FOL1P53848 824 aa5.12□□□□□ -1.59
CDC28YBR160W JJJ1P53863 590 aa5.12□□□□□ -1.59
CDC28YBR160W BET4Q00618 327 aa5.12□□□□□ -1.59
CDC28YBR160W YKU80Q04437 629 aa5.12□□□□□ -1.59
CDC28YBR160W GTB1Q04924 702 aa5.12□□□□□ -1.59
CDC28YBR160W FMP25Q08023 583 aa5.12□□□□□ -1.59
CDC28YBR160W FLO11P08640 1367 aa5.12□□□□□ -1.59
CDC28YBR160W CAN1P04817 590 aa5.11□□□□□ -1.59
CDC28YBR160W HEM15P16622 393 aa5.11□□□□□ -1.59
CDC28YBR160W SPO16P17122 198 aa5.11□□□□□ -1.59
CDC28YBR160W TYR1P20049 452 aa5.11□□□□□ -1.59
CDC28YBR160W REC107P21651 314 aa5.11□□□□□ -1.59
CDC28YBR160W GSY1P23337 708 aa5.11□□□□□ -1.59
CDC28YBR160W KRE2P27809 442 aa5.11□□□□□ -1.59
CDC28YBR160W PUP2P32379 260 aa5.11□□□□□ -1.59
CDC28YBR160W MRE11P32829 692 aa5.11□□□□□ -1.59
CDC28YBR160W YKL050CP35736 922 aa5.11□□□□□ -1.59
CDC28YBR160W JEM1P40358 645 aa5.11□□□□□ -1.59
CDC28YBR160W IRC24P40580 263 aa5.11□□□□□ -1.59
CDC28YBR160W IAH1P41734 238 aa5.11□□□□□ -1.59
CDC28YBR160W GCN20P43535 752 aaKnown RBP5.11□□□□□ -1.59
CDC28YBR160W UBP6P43593 499 aaKnown RBP5.11□□□□□ -1.59
CDC28YBR160W YGL176CP46945 554 aa5.11□□□□□ -1.59
CDC28YBR160W BRO1P48582 844 aa5.11□□□□□ -1.59
CDC28YBR160W GIR2Q03768 265 aaPredicted RBP5.11□□□□□ -1.59
CDC28YBR160W YDL124WQ07551 312 aaKnown RBP5.11□□□□□ -1.59
CDC28YBR160W ACM1Q08981 209 aa5.11□□□□□ -1.59
CDC28YBR160W PCK1P10963 549 aa5.1□□□□□ -1.59
CDC28YBR160W NAT1P12945 854 aaKnown RBP5.1□□□□□ -1.59
CDC28YBR160W PFK1P16861 987 aaKnown RBP5.1□□□□□ -1.59
CDC28YBR160W SFL1P20134 766 aa5.1□□□□□ -1.59
CDC28YBR160W ADE2P21264 571 aaKnown RBP5.1□□□□□ -1.59
CDC28YBR160W CAP1P28495 268 aaKnown RBP5.1□□□□□ -1.59
CDC28YBR160W SSE1P32589 693 aaKnown RBP5.1□□□□□ -1.59
CDC28YBR160W TOA1P32773 286 aa5.1□□□□□ -1.59
CDC28YBR160W TOM20P35180 183 aa5.1□□□□□ -1.59
CDC28YBR160W TRZ1P36159 838 aaPredicted RBP5.1□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 32.3 ms