RNA–Protein interactions for RNA: YAL005C

SSA1, Transcript of ATPase involved in protein folding and NLS-directed nuclear transport, yeastyeast

Gene SSA1, Length 1,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSA1YAL005C ADY2P25613 283 aa13.81□□□□□ -0.2
SSA1YAL005C PLC1P32383 869 aa13.81□□□□□ -0.2
SSA1YAL005C ATM1P40416 690 aa13.81□□□□□ -0.2
SSA1YAL005C UFE1P41834 346 aa13.81□□□□□ -0.2
SSA1YAL005C EMW1P42842 904 aaKnown RBP13.81□□□□□ -0.2
SSA1YAL005C MNN11P46985 422 aaKnown RBP13.81□□□□□ -0.2
SSA1YAL005C CBC2Q08920 208 aaKnown RBP RIP-Chip data13.81□□□□□ -0.2not detected
SSA1YAL005C YLL056CQ12177 298 aa13.81□□□□□ -0.2
SSA1YAL005C AVL9Q12500 764 aa13.81□□□□□ -0.2
SSA1YAL005C EFG1Q3E705 233 aaKnown RBP13.81□□□□□ -0.2
SSA1YAL005C PEP5P12868 1029 aa13.8□□□□□ -0.2
SSA1YAL005C MGT1P26188 188 aa13.8□□□□□ -0.2
SSA1YAL005C YIL161WP40449 235 aaKnown RBP13.8□□□□□ -0.2
SSA1YAL005C COP1P53622 1201 aaKnown RBP13.8□□□□□ -0.2
SSA1YAL005C ECM38Q05902 660 aaPredicted RBP13.8□□□□□ -0.2
SSA1YAL005C NOP58Q12499 511 aaKnown RBP13.8□□□□□ -0.2
SSA1YAL005C SPP381P38282 291 aaPredicted RBP13.8□□□□□ -0.2
SSA1YAL005C PPE1P38796 400 aa13.8□□□□□ -0.2
SSA1YAL005C YEL028WP39989 153 aa13.8□□□□□ -0.2
SSA1YAL005C KTR7P40504 517 aa13.8□□□□□ -0.2
SSA1YAL005C MVP1P40959 511 aaKnown RBP13.8□□□□□ -0.2
SSA1YAL005C RPS10BP46784 105 aaKnown RBP13.8□□□□□ -0.2
SSA1YAL005C TCB2P48231 1178 aa13.8□□□□□ -0.2
SSA1YAL005C VPS9P54787 451 aa13.8□□□□□ -0.2
SSA1YAL005C RPS10AQ08745 105 aaPredicted RBP13.8□□□□□ -0.2
SSA1YAL005C MET22P32179 357 aa13.79□□□□□ -0.2
SSA1YAL005C CKB2P38930 258 aa13.79□□□□□ -0.2
SSA1YAL005C NRD1P53617 575 aaKnown RBP RIP-Chip data13.79□□□□□ -0.2not detected
SSA1YAL005C AI5_ALPHAQ9ZZX1 630 aa13.79□□□□□ -0.2
SSA1YAL005C SPO16P17122 198 aa13.78□□□□□ -0.2
SSA1YAL005C OTU2P38747 307 aaKnown RBP13.78□□□□□ -0.2
SSA1YAL005C MND2P40577 368 aa13.78□□□□□ -0.2
SSA1YAL005C YJR079WP47126 109 aa13.78□□□□□ -0.2
SSA1YAL005C RPN4Q03465 531 aa13.78□□□□□ -0.2
SSA1YAL005C NSE5Q03718 556 aa13.78□□□□□ -0.2
SSA1YAL005C GRX8Q05926 109 aa13.78□□□□□ -0.2
SSA1YAL005C CDC73Q06697 393 aa13.78□□□□□ -0.2
SSA1YAL005C SEY1Q99287 776 aa13.78□□□□□ -0.2
SSA1YAL005C SEC6P32844 805 aa13.78□□□□□ -0.2
SSA1YAL005C YBP1P38315 674 aa13.78□□□□□ -0.2
SSA1YAL005C INA22P40576 216 aa13.78□□□□□ -0.2
SSA1YAL005C MRX6P48564 524 aa13.78□□□□□ -0.2
SSA1YAL005C LEE1Q02799 301 aaKnown RBP13.78□□□□□ -0.2
SSA1YAL005C INP2Q03824 705 aa13.78□□□□□ -0.2
SSA1YAL005C PNP1Q05788 311 aa13.78□□□□□ -0.2
SSA1YAL005C TPS2P31688 896 aaKnown RBP13.77□□□□□ -0.21
SSA1YAL005C RAD5P32849 1169 aaPredicted RBP13.77□□□□□ -0.21
SSA1YAL005C NFU1P32860 256 aa13.77□□□□□ -0.21
SSA1YAL005C TAN1P53072 289 aaPredicted RBP13.77□□□□□ -0.21
SSA1YAL005C PML39Q03760 334 aa13.77□□□□□ -0.21
SSA1YAL005C HSF1P10961 833 aa13.76□□□□□ -0.21
SSA1YAL005C ATG12P38316 186 aa13.76□□□□□ -0.21
SSA1YAL005C YHR131CP38835 850 aa13.76□□□□□ -0.21
SSA1YAL005C LSB6P42951 607 aa13.76□□□□□ -0.21
SSA1YAL005C PSE1P32337 1089 aaKnown RBP13.76□□□□□ -0.21
SSA1YAL005C UTR2P32623 467 aa13.76□□□□□ -0.21
SSA1YAL005C KTR4P38131 464 aa13.76□□□□□ -0.21
SSA1YAL005C SWC7Q06707 132 aa13.76□□□□□ -0.21
SSA1YAL005C NRT1Q08485 598 aa13.76□□□□□ -0.21
SSA1YAL005C CMD1P06787 147 aaKnown RBP13.75□□□□□ -0.21
SSA1YAL005C RAM1P22007 431 aa13.75□□□□□ -0.21
SSA1YAL005C KAP104P38217 918 aaKnown RBP13.75□□□□□ -0.21
SSA1YAL005C BST1P43571 1029 aa13.75□□□□□ -0.21
SSA1YAL005C YJL132WP47014 750 aa13.75□□□□□ -0.21
SSA1YAL005C PRP24P49960 444 aaKnown RBP13.75□□□□□ -0.21
SSA1YAL005C YMR160WQ03823 816 aa13.75□□□□□ -0.21
SSA1YAL005C MSR1P38714 643 aa13.74□□□□□ -0.21
SSA1YAL005C YAT2P40017 923 aa13.74□□□□□ -0.21
SSA1YAL005C SCC4P40090 624 aa13.74□□□□□ -0.21
SSA1YAL005C ADI1Q03677 179 aa13.74□□□□□ -0.21
SSA1YAL005C ARP9Q05123 467 aa13.74□□□□□ -0.21
SSA1YAL005C HEM15P16622 393 aa13.74□□□□□ -0.21
SSA1YAL005C SIR1P21691 654 aa13.74□□□□□ -0.21
SSA1YAL005C SAP1P39955 897 aaKnown RBP13.74□□□□□ -0.21
SSA1YAL005C TAH11P47112 604 aa13.74□□□□□ -0.21
SSA1YAL005C RTN1Q04947 295 aaKnown RBP13.74□□□□□ -0.21
SSA1YAL005C YDR344CQ05510 147 aa13.74□□□□□ -0.21
SSA1YAL005C YCS4Q06156 1176 aa13.74□□□□□ -0.21
SSA1YAL005C AFI1Q99222 893 aa13.74□□□□□ -0.21
SSA1YAL005C CCH1P50077 2039 aa13.73□□□□□ -0.21
SSA1YAL005C IMA3P0CW40 589 aa13.73□□□□□ -0.21
SSA1YAL005C IMA4P0CW41 589 aa13.73□□□□□ -0.21
SSA1YAL005C TSR4P25040 408 aa13.73□□□□□ -0.21
SSA1YAL005C SGE1P33335 543 aa13.73□□□□□ -0.21
SSA1YAL005C LTV1P34078 463 aa13.73□□□□□ -0.21
SSA1YAL005C YJR039WP47107 1121 aa13.73□□□□□ -0.21
SSA1YAL005C IMA2Q08295 589 aa13.73□□□□□ -0.21
SSA1YAL005C AAD15Q08361 143 aa13.73□□□□□ -0.21
SSA1YAL005C YKL068W-AQ3E826 78 aa13.73□□□□□ -0.21
SSA1YAL005C ECM32P32644 1121 aaKnown RBP13.72□□□□□ -0.21
SSA1YAL005C COY1P34237 679 aa13.72□□□□□ -0.21
SSA1YAL005C FUI1P38196 639 aa13.72□□□□□ -0.21
SSA1YAL005C TRF5P48561 642 aaKnown RBP13.72□□□□□ -0.21
SSA1YAL005C YPR003CP53394 754 aa13.72□□□□□ -0.21
SSA1YAL005C COG6P53959 839 aa13.72□□□□□ -0.21
SSA1YAL005C YLR012CQ07927 99 aa13.72□□□□□ -0.21
SSA1YAL005C CDC20P26309 610 aa13.72□□□□□ -0.21
SSA1YAL005C YKR023WP36119 530 aaKnown RBP13.72□□□□□ -0.21
SSA1YAL005C DLD2P46681 530 aaKnown RBP13.72□□□□□ -0.21
SSA1YAL005C ASN2P49090 572 aaKnown RBP13.72□□□□□ -0.21
Retrieved 100 of 5,963 RNA–protein pairs in 43 ms