RNA–Protein interactions for RNA: ENST00000640615.1

HLA-B-258, Transcript of major histocompatibility complex, class I, B, humanhuman

BASIC

Gene HLA-B, Length 240 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-258ENST00000640615 TMOD2Q9NZR1 351 aa10.43□□□□□ -0.74
HLA-B-258ENST00000640615 SAP30BPQ9UHR5 308 aaKnown RBP10.43□□□□□ -0.74
HLA-B-258ENST00000640615 ZMYM6O95789 1325 aa10.42□□□□□ -0.74
HLA-B-258ENST00000640615 FLT1P17948 1338 aa10.42□□□□□ -0.74
HLA-B-258ENST00000640615 CLRN2A0PK11 232 aa10.42□□□□□ -0.74
HLA-B-258ENST00000640615 GLTPD2A6NH11 291 aa10.42□□□□□ -0.74
HLA-B-258ENST00000640615 USP17L12C9JPN9 530 aa10.42□□□□□ -0.74
HLA-B-258ENST00000640615 USP17L21D6R901 530 aa10.42□□□□□ -0.74
HLA-B-258ENST00000640615 MYO1BO43795 1136 aa10.42□□□□□ -0.74
HLA-B-258ENST00000640615 WDHD1O75717 1129 aaPredicted RBP10.42□□□□□ -0.74
HLA-B-258ENST00000640615 POLR3DP05423 398 aaPredicted RBP10.42□□□□□ -0.74
HLA-B-258ENST00000640615 LMOD1P29536 600 aaPredicted RBP10.42□□□□□ -0.74
HLA-B-258ENST00000640615 CACNB3P54284 484 aa10.42□□□□□ -0.74
HLA-B-258ENST00000640615 KRT32Q14532 448 aa10.42□□□□□ -0.74
HLA-B-258ENST00000640615 TBC1D10BQ4KMP7 808 aaPredicted RBP10.42□□□□□ -0.74
HLA-B-258ENST00000640615 CTR9Q6PD62 1173 aa10.42□□□□□ -0.74
HLA-B-258ENST00000640615 SAMD7Q7Z3H4 446 aa10.42□□□□□ -0.74
HLA-B-258ENST00000640615 JAKMIP1Q96N16 626 aaKnown RBP10.42□□□□□ -0.74
HLA-B-258ENST00000640615 KIF2CQ99661 725 aa10.42□□□□□ -0.74
HLA-B-258ENST00000640615 RRAGCQ9HB90 399 aa10.42□□□□□ -0.74
HLA-B-258ENST00000640615 GPRC5DQ9NZD1 345 aa10.42□□□□□ -0.74
HLA-B-258ENST00000640615 ZNF70Q9UC06 446 aaPredicted RBP10.42□□□□□ -0.74
HLA-B-258ENST00000640615 TAF6LQ9Y6J9 622 aa10.42□□□□□ -0.74
HLA-B-258ENST00000640615 CYP2D7A0A087X1C5 515 aa10.41□□□□□ -0.74
HLA-B-258ENST00000640615 WNT10BO00744 389 aa10.41□□□□□ -0.74
HLA-B-258ENST00000640615 EGFRP00533 1210 aa10.41□□□□□ -0.74
HLA-B-258ENST00000640615 CYP2D6P10635 497 aa10.41□□□□□ -0.74
HLA-B-258ENST00000640615 EPS15P42566 896 aa10.41□□□□□ -0.74
HLA-B-258ENST00000640615 CTDSPL2Q05D32 466 aa10.41□□□□□ -0.74
HLA-B-258ENST00000640615 PPARAQ07869 468 aa10.41□□□□□ -0.74
HLA-B-258ENST00000640615 TCP10Q12799 353 aa10.41□□□□□ -0.74
HLA-B-258ENST00000640615 NFIAQ12857 509 aa10.41□□□□□ -0.74
HLA-B-258ENST00000640615 KIF4BQ2VIQ3 1234 aa10.41□□□□□ -0.74
HLA-B-258ENST00000640615 SLC4A8Q2Y0W8 1093 aa10.41□□□□□ -0.74
HLA-B-258ENST00000640615 NBPF9Q3BBW0 867 aa10.41□□□□□ -0.74
HLA-B-258ENST00000640615 TSGA10IPQ3SY00 556 aa10.41□□□□□ -0.74
HLA-B-258ENST00000640615 STK11IPQ8N1F8 1099 aa10.41□□□□□ -0.74
HLA-B-258ENST00000640615 SMC1BQ8NDV3 1235 aa10.41□□□□□ -0.74
HLA-B-258ENST00000640615 ZBED3Q96IU2 234 aaPredicted RBP10.41□□□□□ -0.74
HLA-B-258ENST00000640615 VEZTQ9HBM0 779 aa10.41□□□□□ -0.74
HLA-B-258ENST00000640615 DDX4Q9NQI0 724 aaKnown RBP10.41□□□□□ -0.74
HLA-B-258ENST00000640615 ARPP21Q9UBL0 812 aaPredicted RBP10.41□□□□□ -0.74
HLA-B-258ENST00000640615 MKRN1Q9UHC7 482 aaKnown RBP10.41□□□□□ -0.74
HLA-B-258ENST00000640615 ZNF646O15015 1829 aaPredicted RBP10.41□□□□□ -0.74
HLA-B-258ENST00000640615 MYH2Q9UKX2 1941 aa10.41□□□□□ -0.74
HLA-B-258ENST00000640615 PSME4Q14997 1843 aa10.4□□□□□ -0.74
HLA-B-258ENST00000640615 POTECB2RU33 542 aa10.4□□□□□ -0.74
HLA-B-258ENST00000640615 TCP10L2B9ZVM9 353 aa10.4□□□□□ -0.74
HLA-B-258ENST00000640615 E7EWF7 191 aa10.4□□□□□ -0.74
HLA-B-258ENST00000640615 SLC3A2P08195 630 aaKnown RBP10.4□□□□□ -0.74
HLA-B-258ENST00000640615 VEGFAP15692 232 aaPredicted RBP10.4□□□□□ -0.74
HLA-B-258ENST00000640615 PSMA5P28066 241 aa10.4□□□□□ -0.74
HLA-B-258ENST00000640615 ANP32AP39687 249 aaKnown RBP10.4□□□□□ -0.74
HLA-B-258ENST00000640615 RABEP1Q15276 862 aa10.4□□□□□ -0.74
HLA-B-258ENST00000640615 ADCK5Q3MIX3 580 aa10.4□□□□□ -0.74
HLA-B-258ENST00000640615 SPDYE2Q495Y8 402 aa10.4□□□□□ -0.74
HLA-B-258ENST00000640615 SBK1Q52WX2 424 aa10.4□□□□□ -0.74
HLA-B-258ENST00000640615 C12orf60Q5U649 245 aa10.4□□□□□ -0.74
HLA-B-258ENST00000640615 TBC1D10CQ8IV04 446 aa10.4□□□□□ -0.74
HLA-B-258ENST00000640615 ZFPM1Q8IX07 1006 aa10.4□□□□□ -0.74
HLA-B-258ENST00000640615 NEK1Q96PY6 1258 aa10.4□□□□□ -0.74
HLA-B-258ENST00000640615 IDI2Q9BXS1 227 aa10.4□□□□□ -0.74
HLA-B-258ENST00000640615 NBPF3Q9H094 633 aa10.4□□□□□ -0.74
HLA-B-258ENST00000640615 OSBPL5Q9H0X9 879 aaPredicted RBP10.4□□□□□ -0.74
HLA-B-258ENST00000640615 FAM198AQ9UFP1 575 aa10.4□□□□□ -0.74
HLA-B-258ENST00000640615 ANAPC4Q9UJX5 808 aa10.4□□□□□ -0.74
HLA-B-258ENST00000640615 SMIM22K7EJ46 135 aa10.39□□□□□ -0.75
HLA-B-258ENST00000640615 ENTPD3O75355 529 aa10.39□□□□□ -0.75
HLA-B-258ENST00000640615 NPM3O75607 178 aaKnown RBP10.39□□□□□ -0.75
HLA-B-258ENST00000640615 CASTP20810 708 aaKnown RBP10.39□□□□□ -0.75
HLA-B-258ENST00000640615 NEK4P51957 841 aa10.39□□□□□ -0.75
HLA-B-258ENST00000640615 EVX2Q03828 476 aa10.39□□□□□ -0.75
HLA-B-258ENST00000640615 TRDNQ13061 729 aa10.39□□□□□ -0.75
HLA-B-258ENST00000640615 RRP12Q5JTH9 1297 aaKnown RBP10.39□□□□□ -0.75
HLA-B-258ENST00000640615 AKNAD1Q5T1N1 836 aa10.39□□□□□ -0.75
HLA-B-258ENST00000640615 BLOC1S2Q6QNY1 142 aa10.39□□□□□ -0.75
HLA-B-258ENST00000640615 MFSD6Q6ZSS7 791 aa10.39□□□□□ -0.75
HLA-B-258ENST00000640615 STOX1Q6ZVD7 989 aa10.39□□□□□ -0.75
HLA-B-258ENST00000640615 TTC6Q86TZ1 520 aa10.39□□□□□ -0.75
HLA-B-258ENST00000640615 ZSCAN29Q8IWY8 852 aaPredicted RBP10.39□□□□□ -0.75
HLA-B-258ENST00000640615 TRPM4Q8TD43 1214 aa10.39□□□□□ -0.75
HLA-B-258ENST00000640615 IL17RAQ96F46 866 aa10.39□□□□□ -0.75
HLA-B-258ENST00000640615 UPF3BQ9BZI7 483 aaKnown RBP10.39□□□□□ -0.75
HLA-B-258ENST00000640615 TM6SF1Q9BZW5 370 aa10.39□□□□□ -0.75
HLA-B-258ENST00000640615 RNF41Q9H4P4 317 aaPredicted RBP10.39□□□□□ -0.75
HLA-B-258ENST00000640615 ZSWIM6Q9HCJ5 1215 aa10.39□□□□□ -0.75
HLA-B-258ENST00000640615 INCENPQ9NQS7 918 aa10.39□□□□□ -0.75
HLA-B-258ENST00000640615 TOMM22Q9NS69 142 aa10.39□□□□□ -0.75
HLA-B-258ENST00000640615 CYP46A1Q9Y6A2 500 aa10.39□□□□□ -0.75
HLA-B-258ENST00000640615 ADAMTSL1Q8N6G6 1762 aa10.39□□□□□ -0.75
HLA-B-258ENST00000640615 ASTN2O75129 1339 aaPredicted RBP10.38□□□□□ -0.75
HLA-B-258ENST00000640615 HLA-DOAP06340 250 aa10.38□□□□□ -0.75
HLA-B-258ENST00000640615 HMGB1P09429 215 aaKnown RBP10.38□□□□□ -0.75
HLA-B-258ENST00000640615 CPA1P15085 419 aa10.38□□□□□ -0.75
HLA-B-258ENST00000640615 PLCD1P51178 756 aa10.38□□□□□ -0.75
HLA-B-258ENST00000640615 HTRA3P83110 453 aa10.38□□□□□ -0.75
HLA-B-258ENST00000640615 RUFY3Q7L099 469 aa10.38□□□□□ -0.75
HLA-B-258ENST00000640615 RALYLQ86SE5 291 aaKnown RBP10.38□□□□□ -0.75
HLA-B-258ENST00000640615 NCOA7Q8NI08 942 aa10.38□□□□□ -0.75
HLA-B-258ENST00000640615 STAG1Q8WVM7 1258 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms