RNA–Protein interactions for RNA: ENST00000639358.1

KCNQ3-207, Transcript of potassium voltage-gated channel subfamily Q member 3, humanhuman

TSL 5

Gene KCNQ3, Length 822 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3-207ENST00000639358 NFIAQ12857 509 aa16.6■□□□□ 0.25
KCNQ3-207ENST00000639358 PUM3Q15397 648 aaKnown RBP16.6■□□□□ 0.25
KCNQ3-207ENST00000639358 VGLL2Q8N8G2 317 aa16.6■□□□□ 0.25
KCNQ3-207ENST00000639358 KAZALD1Q96I82 304 aa16.6■□□□□ 0.25
KCNQ3-207ENST00000639358 NBPF3Q9H094 633 aa16.6■□□□□ 0.25
KCNQ3-207ENST00000639358 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.6■□□□□ 0.25
KCNQ3-207ENST00000639358 USP40Q9NVE5 1235 aa16.6■□□□□ 0.25
KCNQ3-207ENST00000639358 ZMYND8Q9ULU4 1186 aaPredicted RBP16.6■□□□□ 0.25
KCNQ3-207ENST00000639358 DAGLAQ9Y4D2 1042 aa16.6■□□□□ 0.25
KCNQ3-207ENST00000639358 AFG3L2Q9Y4W6 797 aa16.6■□□□□ 0.25
KCNQ3-207ENST00000639358 CUL9Q8IWT3 2517 aa16.59■□□□□ 0.25
KCNQ3-207ENST00000639358 PHF20L1A8MW92 1017 aa16.59■□□□□ 0.25
KCNQ3-207ENST00000639358 NBPF7P0C2Y1 421 aaPredicted RBP16.59■□□□□ 0.25
KCNQ3-207ENST00000639358 Q7L0L9 218 aa16.59■□□□□ 0.25
KCNQ3-207ENST00000639358 TDHQ8IZJ6 230 aa16.59■□□□□ 0.25
KCNQ3-207ENST00000639358 DIS3LQ8TF46 1054 aaKnown RBP16.59■□□□□ 0.25
KCNQ3-207ENST00000639358 BICC1Q9H694 974 aaKnown RBP16.59■□□□□ 0.25
KCNQ3-207ENST00000639358 MTMR10Q9NXD2 777 aa16.59■□□□□ 0.25
KCNQ3-207ENST00000639358 FAM198AQ9UFP1 575 aa16.59■□□□□ 0.25
KCNQ3-207ENST00000639358 LRRFIP2Q9Y608 721 aaKnown RBP16.59■□□□□ 0.25
KCNQ3-207ENST00000639358 SLC5A1P13866 664 aa16.58■□□□□ 0.24
KCNQ3-207ENST00000639358 DIXDC1Q155Q3 683 aa16.58■□□□□ 0.24
KCNQ3-207ENST00000639358 RABL6Q3YEC7 729 aaPredicted RBP16.58■□□□□ 0.24
KCNQ3-207ENST00000639358 WDR63Q8IWG1 891 aa16.58■□□□□ 0.24
KCNQ3-207ENST00000639358 ANKRD13CQ8N6S4 541 aa16.58■□□□□ 0.24
KCNQ3-207ENST00000639358 PNMA3Q9UL41 463 aa16.58■□□□□ 0.24
KCNQ3-207ENST00000639358 CACNA1FO60840 1977 aa16.58■□□□□ 0.24
KCNQ3-207ENST00000639358 UTYO14607 1347 aa16.57■□□□□ 0.24
KCNQ3-207ENST00000639358 RPTORQ8N122 1335 aa16.57■□□□□ 0.24
KCNQ3-207ENST00000639358 LDHBP07195 334 aaKnown RBP16.57■□□□□ 0.24
KCNQ3-207ENST00000639358 ZSCAN29Q8IWY8 852 aaPredicted RBP16.57■□□□□ 0.24
KCNQ3-207ENST00000639358 UBE2OQ9C0C9 1292 aaKnown RBP16.57■□□□□ 0.24
KCNQ3-207ENST00000639358 HMX1Q9NP08 348 aaPredicted RBP16.57■□□□□ 0.24
KCNQ3-207ENST00000639358 AGTPBP1Q9UPW5 1226 aa16.57■□□□□ 0.24
KCNQ3-207ENST00000639358 TRIM75PA6NK02 468 aa16.56■□□□□ 0.24
KCNQ3-207ENST00000639358 CTNND1O60716 968 aaKnown RBP16.56■□□□□ 0.24
KCNQ3-207ENST00000639358 HMGCRP04035 888 aa16.56■□□□□ 0.24
KCNQ3-207ENST00000639358 SYN1P17600 705 aa16.56■□□□□ 0.24
KCNQ3-207ENST00000639358 FGFR2P21802 821 aa16.56■□□□□ 0.24
KCNQ3-207ENST00000639358 MAGEA10P43363 369 aaPredicted RBP16.56■□□□□ 0.24
KCNQ3-207ENST00000639358 FAM110CQ1W6H9 321 aa16.56■□□□□ 0.24
KCNQ3-207ENST00000639358 ZFPM1Q8IX07 1006 aa16.56■□□□□ 0.24
KCNQ3-207ENST00000639358 LPIN2Q92539 896 aa16.56■□□□□ 0.24
KCNQ3-207ENST00000639358 C11orf49Q9H6J7 331 aa16.56■□□□□ 0.24
KCNQ3-207ENST00000639358 ENTPD3O75355 529 aa16.55■□□□□ 0.24
KCNQ3-207ENST00000639358 COL25A1Q9BXS0 654 aaPredicted RBP16.55■□□□□ 0.24
KCNQ3-207ENST00000639358 GNL3LQ9NVN8 582 aaKnown RBP16.55■□□□□ 0.24
KCNQ3-207ENST00000639358 PRDX5P30044 214 aa16.54■□□□□ 0.24
KCNQ3-207ENST00000639358 RGS3P49796 1198 aa16.54■□□□□ 0.24
KCNQ3-207ENST00000639358 MAP3K10Q02779 954 aa16.54■□□□□ 0.24
KCNQ3-207ENST00000639358 ANKRD44Q8N8A2 993 aa16.54■□□□□ 0.24
KCNQ3-207ENST00000639358 KLHDC4Q8TBB5 520 aa16.54■□□□□ 0.24
KCNQ3-207ENST00000639358 IDI2Q9BXS1 227 aa16.54■□□□□ 0.24
KCNQ3-207ENST00000639358 SPINK5Q9NQ38 1064 aaPredicted RBP16.54■□□□□ 0.24
KCNQ3-207ENST00000639358 MGAMO43451 1857 aa16.54■□□□□ 0.24
KCNQ3-207ENST00000639358 GCLCP48506 637 aaPredicted RBP16.53■□□□□ 0.24
KCNQ3-207ENST00000639358 PABPC4Q13310 644 aaKnown RBP eCLIP16.53■□□□□ 0.24
KCNQ3-207ENST00000639358 PROCA1Q8NCQ7 364 aaPredicted RBP16.53■□□□□ 0.24
KCNQ3-207ENST00000639358 SALL2Q9Y467 1007 aaPredicted RBP16.53■□□□□ 0.24
KCNQ3-207ENST00000639358 AK9Q5TCS8 1911 aa16.53■□□□□ 0.24
KCNQ3-207ENST00000639358 ATRNL1Q5VV63 1379 aa16.52■□□□□ 0.24
KCNQ3-207ENST00000639358 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.52■□□□□ 0.24
KCNQ3-207ENST00000639358 DENND2AQ9ULE3 1009 aa16.52■□□□□ 0.24
KCNQ3-207ENST00000639358 EYA2O00167 538 aa16.51■□□□□ 0.23
KCNQ3-207ENST00000639358 TREML2Q5T2D2 321 aa16.51■□□□□ 0.23
KCNQ3-207ENST00000639358 SLF2Q8IX21 1173 aa16.51■□□□□ 0.23
KCNQ3-207ENST00000639358 ZGPATQ8N5A5 531 aaKnown RBP16.51■□□□□ 0.23
KCNQ3-207ENST00000639358 GJD2Q9UKL4 321 aa16.51■□□□□ 0.23
KCNQ3-207ENST00000639358 OGDHLQ9ULD0 1010 aa16.51■□□□□ 0.23
KCNQ3-207ENST00000639358 SALL1Q9NSC2 1324 aa16.5■□□□□ 0.23
KCNQ3-207ENST00000639358 SEMA3EO15041 775 aa16.5■□□□□ 0.23
KCNQ3-207ENST00000639358 SH3BP5LQ7L8J4 393 aa16.5■□□□□ 0.23
KCNQ3-207ENST00000639358 DDTLA6NHG4 134 aaPredicted RBP16.49■□□□□ 0.23
KCNQ3-207ENST00000639358 TRIM32Q13049 653 aa16.49■□□□□ 0.23
KCNQ3-207ENST00000639358 PICALMQ13492 652 aa16.49■□□□□ 0.23
KCNQ3-207ENST00000639358 TBC1D2Q9BYX2 928 aa16.49■□□□□ 0.23
KCNQ3-207ENST00000639358 BCL11AQ9H165 835 aa16.49■□□□□ 0.23
KCNQ3-207ENST00000639358 TBC1D12O60347 775 aa16.48■□□□□ 0.23
KCNQ3-207ENST00000639358 SPP2Q13103 211 aa16.48■□□□□ 0.23
KCNQ3-207ENST00000639358 ATP2B3Q16720 1220 aa16.48■□□□□ 0.23
KCNQ3-207ENST00000639358 CCDC184Q52MB2 194 aa16.48■□□□□ 0.23
KCNQ3-207ENST00000639358 FAM109BQ6ICB4 259 aaPredicted RBP16.48■□□□□ 0.23
KCNQ3-207ENST00000639358 DZIP1Q86YF9 867 aaKnown RBP16.48■□□□□ 0.23
KCNQ3-207ENST00000639358 ZNF280CQ8ND82 737 aa16.48■□□□□ 0.23
KCNQ3-207ENST00000639358 CEP126Q9P2H0 1117 aa16.48■□□□□ 0.23
KCNQ3-207ENST00000639358 CYP2B6P20813 491 aa16.47■□□□□ 0.23
KCNQ3-207ENST00000639358 CCDC84Q86UT8 332 aaPredicted RBP16.47■□□□□ 0.23
KCNQ3-207ENST00000639358 TRMT44Q8IYL2 757 aaKnown RBP16.47■□□□□ 0.23
KCNQ3-207ENST00000639358 TRIB2Q92519 343 aa16.47■□□□□ 0.23
KCNQ3-207ENST00000639358 FAM163AQ96GL9 167 aaPredicted RBP16.47■□□□□ 0.23
KCNQ3-207ENST00000639358 OSBPL5Q9H0X9 879 aaPredicted RBP16.47■□□□□ 0.23
KCNQ3-207ENST00000639358 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.47■□□□□ 0.23
KCNQ3-207ENST00000639358 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.47■□□□□ 0.23
KCNQ3-207ENST00000639358 GAKO14976 1311 aa16.46■□□□□ 0.23
KCNQ3-207ENST00000639358 PFASO15067 1338 aa16.46■□□□□ 0.23
KCNQ3-207ENST00000639358 POTEB2H3BUK9 544 aa16.46■□□□□ 0.23
KCNQ3-207ENST00000639358 XRCC5P13010 732 aaKnown RBP16.46■□□□□ 0.23
KCNQ3-207ENST00000639358 PRKAR2AP13861 404 aaKnown RBP16.46■□□□□ 0.23
KCNQ3-207ENST00000639358 HMGCS2P54868 508 aa16.46■□□□□ 0.23
KCNQ3-207ENST00000639358 MDM2Q00987 491 aaPredicted RBP16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms